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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3135936..3137036- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010366-T1 ID=KJC3_010366-T1|Name=KJC3_010366-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1101bp|location=Sequence derived from alignment at ch7:3135936..3137036- (Aspergillus niger KJC3)
TGACTGGCTAGCTACGCTACATCTACAAGAAAACAAAGGAAGAGAATTTC
TCGAGAAGATGCAAGGGATTATGCAACTTTCAGCAGAAGAGATGCTATAC
TGCCTGACAGCCCGATATGAGAGTCCGCGGAGGAATGACGTGACGTCACC
TCCCTCTCTTTTTGGAGACACGCAGCTTATCAGTGCAAACTGAGCTTATT
ATAATACTACAGTGTTCTCCCCGTGAGTTACAGCTGCTTTAATCTTCATT
TATACATTAGTACATACTAGAACCTCGTGGTTACACTCAGACCCAAGACC
TTCACGAAAGTCAACCTTACGATACCCAGACTTCGATAAGCTAGTACTAT
ATACAAAATGCCCACCATCCCAGCCCGTCGCTCCGCTCATCAACGACTGC
ACGTCGGCCAATCAATCAAGATCATAAACACCTCCGGAAGCCAAGTCATC
GACACCTGGGCATTCACCATCCCATCAACTCCCGTCTTCCCAAGATACAT
GTCAATGGCACACACTCGACCCACTTTACAGAAACTCCTCCCATCCGTTA
ACGAATCATTCGTCGACAACAACCGGAACCCTATTTTGACCATCGTCGAG
GACACATCTCCCGGCACGCACGATGTTCTCTACGCTGCTTGCTCTCCAGA
ACGATACCTCGAACTTGGTGGTACCGCGGACCATGATAACTGTGCCCAGA
ATCTTCGCGATGCTGTGCAGCAGTGTGCTGAGCCAGCGTTCAGCCATGTT
TTGGGGTTCCTTGAGAGTGGATGGACGCCTGATCCGCTGAATTTGTTCAT
GAAGGTCGATATTAATGGGAATAAGTTGAAGGTTTTGGAGCCGGACAGTA
AGGTGGGGGATTATGTGGTTTTGAGGGCGGAGCAGGAGTGTGTTGTGTTT
ATGAGTGCTTGTCCGATGGATTTGACGGCTTGTAATGGTGCGGGGCCTAG
TAGTGCGGAGTTTGAGGTTGTTTAGGCTTGAGCGAATGTGTGCTTAAGTT
GGTGTCGGTAATCTGCAGTGCAGGGATAGGTAATAGATAATATCGTAAAT
CATAACTGAGTTTTGCCCTAATCTTGTTACAAAGATGATAATAGATATAT
A back to topCoding sequence (CDS) from alignment at ch7:3135936..3137036- >KJC3_010366-T1 ID=KJC3_010366-T1|Name=KJC3_010366-T1|organism=Aspergillus niger KJC3|type=CDS|length=618bp|location=Sequence derived from alignment at ch7:3135936..3137036- (Aspergillus niger KJC3)
ATGCCCACCATCCCAGCCCGTCGCTCCGCTCATCAACGACTGCACGTCGG
CCAATCAATCAAGATCATAAACACCTCCGGAAGCCAAGTCATCGACACCT
GGGCATTCACCATCCCATCAACTCCCGTCTTCCCAAGATACATGTCAATG
GCACACACTCGACCCACTTTACAGAAACTCCTCCCATCCGTTAACGAATC
ATTCGTCGACAACAACCGGAACCCTATTTTGACCATCGTCGAGGACACAT
CTCCCGGCACGCACGATGTTCTCTACGCTGCTTGCTCTCCAGAACGATAC
CTCGAACTTGGTGGTACCGCGGACCATGATAACTGTGCCCAGAATCTTCG
CGATGCTGTGCAGCAGTGTGCTGAGCCAGCGTTCAGCCATGTTTTGGGGT
TCCTTGAGAGTGGATGGACGCCTGATCCGCTGAATTTGTTCATGAAGGTC
GATATTAATGGGAATAAGTTGAAGGTTTTGGAGCCGGACAGTAAGGTGGG
GGATTATGTGGTTTTGAGGGCGGAGCAGGAGTGTGTTGTGTTTATGAGTG
CTTGTCCGATGGATTTGACGGCTTGTAATGGTGCGGGGCCTAGTAGTGCG
GAGTTTGAGGTTGTTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010366-T1.utr3p1 | KJC3_010366-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_7.8 |
| DBxref | InterPro:IPR018959 |
| DBxref | PFAM:PF09347 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3135936..3137036 - |
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