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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3153758..3155358+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010373-T2 ID=KJC3_010373-T2|Name=KJC3_010373-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1601bp|location=Sequence derived from alignment at ch7:3153758..3155358+ (Aspergillus niger KJC3)
GTCCGTACCAATTGACATTACTTACTACCGTTATCTCAACTAACCCCCCG
GATATTCAGGACGTACAAAAGAGACAAGAAGGGGAACGTCCGATCGGACT
TTCGGTCACCACTTTCAGAGGTCCGCGCCCGGATATCCTAATTGGGTGTC
GGCTAAAAAAACATGTCCTGGCAGACACCCCTTTATCCGACAAGTCTCCG
TAGCGTCTCACTCCCATCGCTCAGGTCAAACGCCAGAGGCAGTTGAAAGG
TAATATTTTTGGTCATAGTCAGGTTTCATCGTTTGACGCGATGTCGAGAG
GGGTATTCTTGTTTTCGAAAGTCACATACGGCAGCCATACGCAGCATTAT
GTTTGATGTGCAAGGAAATGTACTAAACAGTCCTGACTGACATTTGTCTC
TTTTGCATGGGTTGCTAAGTAGACTTAGTATGCTCTGGTGGCAGGTGGCT
CCAAGGGTTTGGGAAGAGAAATCTCACTGGCGTTGGTAAAGCGAGGTACG
TCGAAGGACTGCACCGAGAGCTCTTAAGCGTTGCCACTGACTCTTTGCTA
TCAGGAGCTCACGTGACAGTGATTGCGCGCTCTCAAGATGCATTGGATAG
GATCAAAGTGGACATGGAAGCGGTACGCGTGCATGGCGATCAAGTCATCG
GTATCCAGAGCTTGGATTTGACCAATAGTGAAGAAGTTTGTACAATTGAA
TTGCGAGTCTATCTCAACGAAACTTTCACTGATGAGATATACTGCTTGGC
TAGGTGTCCAGATTTGTCCAGACATTTGGAAACAAGATCACCGCTCTGTT
CTGTACCGCAGGTGGCACGGACGAAGAGGTGGGCCACTTTGTGGACATCC
CTGCGACCTCAATTCAGAGCTGCATGGAGAAGAATTATCTTACAGCAGCG
TTTGTTGCTCAGGCTGTCATGGGGACATGGACGACTGAGTTGAAGCGGGT
AGGAGAGTGCGACGGTGCCCAGAAATCTCGCCACATTGTTTTCACTGCTT
CCACAGCAGCCCTCGTCGCTGTCCCAGGATACGCTGCATACTCACCATCA
AAGGCAGCGATCCGAGCATTGGCCGATTCCTTGAGGCAGGAAAGTCTCAT
GTACCCCCCTGCTGGGGCGATACAAGTTCACTGTAGCTTCCCTGGGACAT
TTTACACGGACAGCTTCTATAGAGAACAGGCGCGGAAGCCGCAATTATGC
AAAGAAATTGAAGGAACTGTTAATGATGGTGGTGGGTTGACAGCCAAAGA
TGTTGCTCAGCGTGTTCTTGTTGGACTTGATTCGGGGTGTTACTTCATAC
CCACGGATCTGCAAACCCGGTTGCTCCTGAATAACATGCGAGGTCCCAGC
CCACGGGACTACCCATTACTTGACTGGTGCATGGGCTGGGCTGCCTCGTT
GGTCTGGCCAATTATAGGAACTTATCTAGACTGGAAGGTAGCAAGGTCTG
GCGGCGGAACTGTATAAAAGCCTTACCAGAAAGAGACATATCCTGGCTTC
TTACGTCTATGGGTTTAATCTACGATGCTATGAATTCTATCTTAGATTGA
GATGCAGTCATCTTCTTTTAGATTACCGAACTCTAGTGGCTTGCTGGGTG
C back to topCoding sequence (CDS) from alignment at ch7:3153758..3155358+ >KJC3_010373-T2 ID=KJC3_010373-T2|Name=KJC3_010373-T2|organism=Aspergillus niger KJC3|type=CDS|length=594bp|location=Sequence derived from alignment at ch7:3153758..3155358+ (Aspergillus niger KJC3)
ATGGAGAAGAATTATCTTACAGCAGCGTTTGTTGCTCAGGCTGTCATGGG
GACATGGACGACTGAGTTGAAGCGGGTAGGAGAGTGCGACGGTGCCCAGA
AATCTCGCCACATTGTTTTCACTGCTTCCACAGCAGCCCTCGTCGCTGTC
CCAGGATACGCTGCATACTCACCATCAAAGGCAGCGATCCGAGCATTGGC
CGATTCCTTGAGGCAGGAAAGTCTCATGTACCCCCCTGCTGGGGCGATAC
AAGTTCACTGTAGCTTCCCTGGGACATTTTACACGGACAGCTTCTATAGA
GAACAGGCGCGGAAGCCGCAATTATGCAAAGAAATTGAAGGAACTGTTAA
TGATGGTGGTGGGTTGACAGCCAAAGATGTTGCTCAGCGTGTTCTTGTTG
GACTTGATTCGGGGTGTTACTTCATACCCACGGATCTGCAAACCCGGTTG
CTCCTGAATAACATGCGAGGTCCCAGCCCACGGGACTACCCATTACTTGA
CTGGTGCATGGGCTGGGCTGCCTCGTTGGTCTGGCCAATTATAGGAACTT
ATCTAGACTGGAAGGTAGCAAGGTCTGGCGGCGGAACTGTATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010373-T2.utr5p1 | KJC3_010373-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010373-T2.utr3p1 | KJC3_010373-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_7.8 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| Product | variant 2 |
| Product | putative secondary metabolism biosynthetic enzyme |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3153758..3155358 + |
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