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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3169043..3170177- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010381-T1 ID=KJC3_010381-T1|Name=KJC3_010381-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1135bp|location=Sequence derived from alignment at ch7:3169043..3170177- (Aspergillus niger KJC3)
CATAATCAGTTCACAACAATGGCCGAATTTGAAGGAGACTGGGACTGGGA
AAGCCTACTCATGTATAGCAACCAAGAAGAGGATGCACATGTGACTAGCA
GCCCTATGGGTTCAACCGCTGAGACCGCCTTCGCCCCTTTCGAACCTGCG
GGGGTTCGAAGTGATGCTGGTCCATCATTGTCATTCGACGGTACACGGTA
CCGTGAAGATAAACCGACAGGGTTTACCGCAGATTTAGTGGTCAGTAAAA
TGCCTCGAGTAACCTTTACGGTTATGTCCACTGAACTTTAGTCCAGGCAC
TTCAATCACGCTCTCTTGGTATGGCAGCCTTCGTGGCATGAGTTTGGGTA
TTGCAATATCTGACAGGCTTCTGACCAAGTAACACAAGGCCATTCGATCA
CAGGAAAGCTTCATTCACTTGTGCTCGAGGAGGACATTGACATGAGCAGA
CCACAGCGAGCGAAGCTTATACAGGTCCTTGATAGGCTGGCAGCTGGTCG
ATTCCGGCTGCTACATGGAGAAAGCCATGGAAACACTTCGTCAGAAAAGT
CTGAAGAAGGAACAGAGAATTATAGCCGAGAATTCGCCTACAAATGTATA
GACGGTATGCTGGTACCCTGATAGCTTGTCTGACTATGCTTCAGCTGTGA
CAAACTGATACAGTCAAACAGCTTCCTATGTCGACCCCCAAGGGTAAGGG
AGCTTGGACTAAACACAAGCACAAGGTGTAGCTGACCGTCAGCAGTGTAC
CAACGCTCCTCGATAGAGAAGACTTAGAAAGACTGATCGACCGTGTAATG
GATAAAGCAGCCGTTTTCCCTGCTGGTCTAACACTTCTCAATGCTATTCT
CGCCATTGGGTCCCATTGCCTCAATTTAAAAGACTCTACGAGTTCAGCAT
CAAGGGCTAATTATCCAGTGTCCCAGTTCTTTGACAAGGCATTGAAGTTT
AGACATCAAATACCCGCTGAAGCATCCCTAGAAAAGCTTCAGGTGAGTCC
AAAAGTCCCTTAGGGAGAAGAAGTGCTAATCGGGCAATGCAGTCTCTTCT
TGTGATGGTACACTAGCTATACTGACCCGCGTATATATGAAATTTCAGAT
ACTGATGTGTCTTATTAGTCCTATTTTGCCAGTAG back to topCoding sequence (CDS) from alignment at ch7:3169043..3170177- >KJC3_010381-T1 ID=KJC3_010381-T1|Name=KJC3_010381-T1|organism=Aspergillus niger KJC3|type=CDS|length=5292bp|location=Sequence derived from alignment at ch7:3169043..3170177- (Aspergillus niger KJC3)
TAGTCTCTTCTTGTGATGTGTACCAACGCTCCTCGATAGAGAAGACTTAG
AAAGACTGATCGACCGTGTAATGGATAAAGCAGCCGTTTTCCCTGCTGGT
CTAACACTTCTCAATGCTATTCTCGCCATTGGGTCCCATTGCCTCAATTT
AAAAGACTCTACGAGTTCAGCATCAAGGGCTAATTATCCAGTGTCCCAGT
TCTTTGACAAGGCATTGAAGTTTAGACATCAAATACCCGCTGAAGCATCC
CTAGAAAAGCTTCAGCTTCCTATGTCGACCCCCAAGGTAACACAAGGCCA
TTCGATCACAGGAAAGCTTCATTCACTTGTGCTCGAGGAGGACATTGACA
TGAGCAGACCACAGCGAGCGAAGCTTATACAGGTCCTTGATAGGCTGGCA
GCTGGTCGATTCCGGCTGCTACATGGAGAAAGCCATGGAAACACTTCGTC
AGAAAAGTCTGAAGAAGGAACAGAGAATTATAGCCGAGAATTCGCCTACA
AATGTATAGACGGCACTTCAATCACGCTCTCTTGATGGCCGAATTTGAAG
GAGACTGGGACTGGGAAAGCCTACTCATGTATAGCAACCAAGAAGAGGAT
GCACATGTGACTAGCAGCCCTATGGGTTCAACCGCTGAGACCGCCTTCGC
CCCTTTCGAACCTGCGGGGGTTCGAAGTGATGCTGGTCCATCATTGTCAT
TCGACGGTACACGGTACCGTGAAGATAAACCGACAGGGTTTACCGCAGAT
TTAGTGTAGTCTCTTCTTGTGATGTGTACCAACGCTCCTCGATAGAGAAG
ACTTAGAAAGACTGATCGACCGTGTAATGGATAAAGCAGCCGTTTTCCCT
GCTGGTCTAACACTTCTCAATGCTATTCTCGCCATTGGGTCCCATTGCCT
CAATTTAAAAGACTCTACGAGTTCAGCATCAAGGGCTAATTATCCAGTGT
CCCAGTTCTTTGACAAGGCATTGAAGTTTAGACATCAAATACCCGCTGAA
GCATCCCTAGAAAAGCTTCAGCTTCCTATGTCGACCCCCAAGGTAACACA
AGGCCATTCGATCACAGGAAAGCTTCATTCACTTGTGCTCGAGGAGGACA
TTGACATGAGCAGACCACAGCGAGCGAAGCTTATACAGGTCCTTGATAGG
CTGGCAGCTGGTCGATTCCGGCTGCTACATGGAGAAAGCCATGGAAACAC
TTCGTCAGAAAAGTCTGAAGAAGGAACAGAGAATTATAGCCGAGAATTCG
CCTACAAATGTATAGACGGCACTTCAATCACGCTCTCTTGATGGCCGAAT
TTGAAGGAGACTGGGACTGGGAAAGCCTACTCATGTATAGCAACCAAGAA
GAGGATGCACATGTGACTAGCAGCCCTATGGGTTCAACCGCTGAGACCGC
CTTCGCCCCTTTCGAACCTGCGGGGGTTCGAAGTGATGCTGGTCCATCAT
TGTCATTCGACGGTACACGGTACCGTGAAGATAAACCGACAGGGTTTACC
GCAGATTTAGTGTAGTCTCTTCTTGTGATGTGTACCAACGCTCCTCGATA
GAGAAGACTTAGAAAGACTGATCGACCGTGTAATGGATAAAGCAGCCGTT
TTCCCTGCTGGTCTAACACTTCTCAATGCTATTCTCGCCATTGGGTCCCA
TTGCCTCAATTTAAAAGACTCTACGAGTTCAGCATCAAGGGCTAATTATC
CAGTGTCCCAGTTCTTTGACAAGGCATTGAAGTTTAGACATCAAATACCC
GCTGAAGCATCCCTAGAAAAGCTTCAGCTTCCTATGTCGACCCCCAAGGT
AACACAAGGCCATTCGATCACAGGAAAGCTTCATTCACTTGTGCTCGAGG
AGGACATTGACATGAGCAGACCACAGCGAGCGAAGCTTATACAGGTCCTT
GATAGGCTGGCAGCTGGTCGATTCCGGCTGCTACATGGAGAAAGCCATGG
AAACACTTCGTCAGAAAAGTCTGAAGAAGGAACAGAGAATTATAGCCGAG
AATTCGCCTACAAATGTATAGACGGCACTTCAATCACGCTCTCTTGATGG
CCGAATTTGAAGGAGACTGGGACTGGGAAAGCCTACTCATGTATAGCAAC
CAAGAAGAGGATGCACATGTGACTAGCAGCCCTATGGGTTCAACCGCTGA
GACCGCCTTCGCCCCTTTCGAACCTGCGGGGGTTCGAAGTGATGCTGGTC
CATCATTGTCATTCGACGGTACACGGTACCGTGAAGATAAACCGACAGGG
TTTACCGCAGATTTAGTGTAGTCTCTTCTTGTGATGTGTACCAACGCTCC
TCGATAGAGAAGACTTAGAAAGACTGATCGACCGTGTAATGGATAAAGCA
GCCGTTTTCCCTGCTGGTCTAACACTTCTCAATGCTATTCTCGCCATTGG
GTCCCATTGCCTCAATTTAAAAGACTCTACGAGTTCAGCATCAAGGGCTA
ATTATCCAGTGTCCCAGTTCTTTGACAAGGCATTGAAGTTTAGACATCAA
ATACCCGCTGAAGCATCCCTAGAAAAGCTTCAGCTTCCTATGTCGACCCC
CAAGGTAACACAAGGCCATTCGATCACAGGAAAGCTTCATTCACTTGTGC
TCGAGGAGGACATTGACATGAGCAGACCACAGCGAGCGAAGCTTATACAG
GTCCTTGATAGGCTGGCAGCTGGTCGATTCCGGCTGCTACATGGAGAAAG
CCATGGAAACACTTCGTCAGAAAAGTCTGAAGAAGGAACAGAGAATTATA
GCCGAGAATTCGCCTACAAATGTATAGACGGCACTTCAATCACGCTCTCT
TGATGGCCGAATTTGAAGGAGACTGGGACTGGGAAAGCCTACTCATGTAT
AGCAACCAAGAAGAGGATGCACATGTGACTAGCAGCCCTATGGGTTCAAC
CGCTGAGACCGCCTTCGCCCCTTTCGAACCTGCGGGGGTTCGAAGTGATG
CTGGTCCATCATTGTCATTCGACGGTACACGGTACCGTGAAGATAAACCG
ACAGGGTTTACCGCAGATTTAGTGTAGTCTCTTCTTGTGATGTGTACCAA
CGCTCCTCGATAGAGAAGACTTAGAAAGACTGATCGACCGTGTAATGGAT
AAAGCAGCCGTTTTCCCTGCTGGTCTAACACTTCTCAATGCTATTCTCGC
CATTGGGTCCCATTGCCTCAATTTAAAAGACTCTACGAGTTCAGCATCAA
GGGCTAATTATCCAGTGTCCCAGTTCTTTGACAAGGCATTGAAGTTTAGA
CATCAAATACCCGCTGAAGCATCCCTAGAAAAGCTTCAGCTTCCTATGTC
GACCCCCAAGGTAACACAAGGCCATTCGATCACAGGAAAGCTTCATTCAC
TTGTGCTCGAGGAGGACATTGACATGAGCAGACCACAGCGAGCGAAGCTT
ATACAGGTCCTTGATAGGCTGGCAGCTGGTCGATTCCGGCTGCTACATGG
AGAAAGCCATGGAAACACTTCGTCAGAAAAGTCTGAAGAAGGAACAGAGA
ATTATAGCCGAGAATTCGCCTACAAATGTATAGACGGCACTTCAATCACG
CTCTCTTGATGGCCGAATTTGAAGGAGACTGGGACTGGGAAAGCCTACTC
ATGTATAGCAACCAAGAAGAGGATGCACATGTGACTAGCAGCCCTATGGG
TTCAACCGCTGAGACCGCCTTCGCCCCTTTCGAACCTGCGGGGGTTCGAA
GTGATGCTGGTCCATCATTGTCATTCGACGGTACACGGTACCGTGAAGAT
AAACCGACAGGGTTTACCGCAGATTTAGTGTAGTCTCTTCTTGTGATGTG
TACCAACGCTCCTCGATAGAGAAGACTTAGAAAGACTGATCGACCGTGTA
ATGGATAAAGCAGCCGTTTTCCCTGCTGGTCTAACACTTCTCAATGCTAT
TCTCGCCATTGGGTCCCATTGCCTCAATTTAAAAGACTCTACGAGTTCAG
CATCAAGGGCTAATTATCCAGTGTCCCAGTTCTTTGACAAGGCATTGAAG
TTTAGACATCAAATACCCGCTGAAGCATCCCTAGAAAAGCTTCAGCTTCC
TATGTCGACCCCCAAGGTAACACAAGGCCATTCGATCACAGGAAAGCTTC
ATTCACTTGTGCTCGAGGAGGACATTGACATGAGCAGACCACAGCGAGCG
AAGCTTATACAGGTCCTTGATAGGCTGGCAGCTGGTCGATTCCGGCTGCT
ACATGGAGAAAGCCATGGAAACACTTCGTCAGAAAAGTCTGAAGAAGGAA
CAGAGAATTATAGCCGAGAATTCGCCTACAAATGTATAGACGGCACTTCA
ATCACGCTCTCTTGATGGCCGAATTTGAAGGAGACTGGGACTGGGAAAGC
CTACTCATGTATAGCAACCAAGAAGAGGATGCACATGTGACTAGCAGCCC
TATGGGTTCAACCGCTGAGACCGCCTTCGCCCCTTTCGAACCTGCGGGGG
TTCGAAGTGATGCTGGTCCATCATTGTCATTCGACGGTACACGGTACCGT
GAAGATAAACCGACAGGGTTTACCGCAGATTTAGTGTAGTCTCTTCTTGT
GATGTGTACCAACGCTCCTCGATAGAGAAGACTTAGAAAGACTGATCGAC
CGTGTAATGGATAAAGCAGCCGTTTTCCCTGCTGGTCTAACACTTCTCAA
TGCTATTCTCGCCATTGGGTCCCATTGCCTCAATTTAAAAGACTCTACGA
GTTCAGCATCAAGGGCTAATTATCCAGTGTCCCAGTTCTTTGACAAGGCA
TTGAAGTTTAGACATCAAATACCCGCTGAAGCATCCCTAGAAAAGCTTCA
GCTTCCTATGTCGACCCCCAAGGTAACACAAGGCCATTCGATCACAGGAA
AGCTTCATTCACTTGTGCTCGAGGAGGACATTGACATGAGCAGACCACAG
CGAGCGAAGCTTATACAGGTCCTTGATAGGCTGGCAGCTGGTCGATTCCG
GCTGCTACATGGAGAAAGCCATGGAAACACTTCGTCAGAAAAGTCTGAAG
AAGGAACAGAGAATTATAGCCGAGAATTCGCCTACAAATGTATAGACGGC
ACTTCAATCACGCTCTCTTGATGGCCGAATTTGAAGGAGACTGGGACTGG
GAAAGCCTACTCATGTATAGCAACCAAGAAGAGGATGCACATGTGACTAG
CAGCCCTATGGGTTCAACCGCTGAGACCGCCTTCGCCCCTTTCGAACCTG
CGGGGGTTCGAAGTGATGCTGGTCCATCATTGTCATTCGACGGTACACGG
TACCGTGAAGATAAACCGACAGGGTTTACCGCAGATTTAGTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010381-T1.utr5p1 | KJC3_010381-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_7.8 |
| Note | antiSMASH:Cluster_7.9 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3169043..3170177 - |
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