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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3214651..3215596+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010391-T1 ID=KJC3_010391-T1|Name=KJC3_010391-T1|organism=Aspergillus niger KJC3|type=mRNA|length=946bp|location=Sequence derived from alignment at ch7:3214651..3215596+ (Aspergillus niger KJC3)
ATGGCGGAGTATTGGAAATCAGCGGTAGGCAGAAACGTTCTCTCTCATCT
CCCGTGTCTCAGCACTGACTCCGACACAGCCCAAGTTTTGGTGCAAGCAA
TGCAAGATCTTCATTCGCGATACCGCCTTCGAAAAGTCCCAACATGAGGC
TACAGCCAAGCATCAGGGTAATCTAAAGCGCTTCCTTCGTGACATCCATC
GGAACAATGAGCAGCAACAGCGCGAAGCACAGAGAGCGAAAAATGAGGTT
GAGCGACTTCGCCAGACCGTAGCCGGGTCTGCGGGTGGAAAAGACGGGGA
TGCTGCGCCCTGGAAACGTGCGCCCGCCCCGGCGCCCAAACCTCAGGAGC
GACCTGTTTCTCTGGAAGAGAGAAAGCGACAAATGGCACAATTAGCGGAG
ATGGGTATCGCTATTCCGGAAGAATACCGCAGTGAGATGGCCCTGGCCGG
AGAATGGCAGACACTGTCGGAGAAAGTCGTACAACCTTCGGAGGAATCAA
AAGCCAGTCAATCACTAGGGGTACGCAAACGAAAGCATGAAGAGCGGGAT
GAGGAGGAAGAAGAGGCGAAACAGGAAGCCGAACGTTTTGTTAGTAAGGG
CTGGGGCTCCCGGACACGAGTGTATCCGGGTGCCCAAGAGGACACTGACC
TCGACGCTCTTTTGGAGTCGACGAAAGATATTAAAAAGGGTAAATCCGCA
GCTCCTGCGGAATCGGCGCCGGAGCCAGAGCCTGAGAAGGCGTCGGATTC
CGTCAAGAGTCAGTTCCTGCCGGTCAAGTCGGAAGGGGATGCAGCAGCTC
CTGAGACCGGTGAGCCGTCTCAAGTCAAACAGGAGAGCGAGACTGCCCCC
TCCGAGGCGGCTCCTGTGACAAAGGAGGAACCGGAAGATGCCCCAGCTAC
AGGGGTTGTTTTCAAAAAGCGCAAGGCTAAGGTTATGAGAAAGTAA back to topCoding sequence (CDS) from alignment at ch7:3214651..3215596+ >KJC3_010391-T1 ID=KJC3_010391-T1|Name=KJC3_010391-T1|organism=Aspergillus niger KJC3|type=CDS|length=1782bp|location=Sequence derived from alignment at ch7:3214651..3215596+ (Aspergillus niger KJC3)
ATGGCGGAGTATTGGAAATCAGCGCCCAAGTTTTGGTGCAAGCAATGCAA
GATCTTCATTCGCGATACCGCCTTCGAAAAGTCCCAACATGAGGCTACAG
CCAAGCATCAGGGTAATCTAAAGCGCTTCCTTCGTGACATCCATCGGAAC
AATGAGCAGCAACAGCGCGAAGCACAGAGAGCGAAAAATGAGGTTGAGCG
ACTTCGCCAGACCGTAGCCGGGTCTGCGGGTGGAAAAGACGGGGATGCTG
CGCCCTGGAAACGTGCGCCCGCCCCGGCGCCCAAACCTCAGGAGCGACCT
GTTTCTCTGGAAGAGAGAAAGCGACAAATGGCACAATTAGCGGAGATGGG
TATCGCTATTCCGGAAGAATACCGCAGTGAGATGGCCCTGGCCGGAGAAT
GGCAGACACTGTCGGAGAAAGTCGTACAACCTTCGGAGGAATCAAAAGCC
AGTCAATCACTAGGGGTACGCAAACGAAAGCATGAAGAGCGGGATGAGGA
GGAAGAAGAGGCGAAACAGGAAGCCGAACGTTTTGTTAGTAAGGGCTGGG
GCTCCCGGACACGAGTGTATCCGGGTGCCCAAGAGGACACTGACCTCGAC
GCTCTTTTGGAGTCGACGAAAGATATTAAAAAGGGTAAATCCGCAGCTCC
TGCGGAATCGGCGCCGGAGCCAGAGCCTGAGAAGGCGTCGGATTCCGTCA
AGAGTCAGTTCCTGCCGGTCAAGTCGGAAGGGGATGCAGCAGCTCCTGAG
ACCGGTGAGCCGTCTCAAGTCAAACAGGAGAGCGAGACTGCCCCCTCCGA
GGCGGCTCCTGTGACAAAGGAGGAACCGGAAGATGCCCCAGCTACAGGGG
TTGTTTTCAAAAAGCGCAAGGCTAAGGTTATGAGAAAGTAAATGGCGGAG
TATTGGAAATCAGCGCCCAAGTTTTGGTGCAAGCAATGCAAGATCTTCAT
TCGCGATACCGCCTTCGAAAAGTCCCAACATGAGGCTACAGCCAAGCATC
AGGGTAATCTAAAGCGCTTCCTTCGTGACATCCATCGGAACAATGAGCAG
CAACAGCGCGAAGCACAGAGAGCGAAAAATGAGGTTGAGCGACTTCGCCA
GACCGTAGCCGGGTCTGCGGGTGGAAAAGACGGGGATGCTGCGCCCTGGA
AACGTGCGCCCGCCCCGGCGCCCAAACCTCAGGAGCGACCTGTTTCTCTG
GAAGAGAGAAAGCGACAAATGGCACAATTAGCGGAGATGGGTATCGCTAT
TCCGGAAGAATACCGCAGTGAGATGGCCCTGGCCGGAGAATGGCAGACAC
TGTCGGAGAAAGTCGTACAACCTTCGGAGGAATCAAAAGCCAGTCAATCA
CTAGGGGTACGCAAACGAAAGCATGAAGAGCGGGATGAGGAGGAAGAAGA
GGCGAAACAGGAAGCCGAACGTTTTGTTAGTAAGGGCTGGGGCTCCCGGA
CACGAGTGTATCCGGGTGCCCAAGAGGACACTGACCTCGACGCTCTTTTG
GAGTCGACGAAAGATATTAAAAAGGGTAAATCCGCAGCTCCTGCGGAATC
GGCGCCGGAGCCAGAGCCTGAGAAGGCGTCGGATTCCGTCAAGAGTCAGT
TCCTGCCGGTCAAGTCGGAAGGGGATGCAGCAGCTCCTGAGACCGGTGAG
CCGTCTCAAGTCAAACAGGAGAGCGAGACTGCCCCCTCCGAGGCGGCTCC
TGTGACAAAGGAGGAACCGGAAGATGCCCCAGCTACAGGGGTTGTTTTCA
AAAAGCGCAAGGCTAAGGTTATGAGAAAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_7.9 |
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR013085 |
| DBxref | InterPro:IPR003604 |
| DBxref | PFAM:PF06220 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3214651..3215596 + |
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