You are here

Home

KJC3_010401-T1, KJC3_010401-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010401-T1
Unique NameKJC3_010401-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3237916..3240348-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010401-T1 ID=KJC3_010401-T1|Name=KJC3_010401-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2433bp|location=Sequence derived from alignment at ch7:3237916..3240348- (Aspergillus niger KJC3)
ATGACTACAGCCACGCAAAAGGCAGAAATGCGAAAAGCAGCTCGTCGAGT
GCCACTCGAACAGCGACAGCGCACGGCGCGCAGCTGTGATCGTTGTAAGG
CAAGAAAACACAAGTGCCTACAAATCCCTGGGCAAGCTCGCTGTCAGCAC
TGCGAACATTTCAATTATACCTGCAAGACCACCAAGCCTAGGAAGAAAAG
ACTTTATGGCAGCGCAGACAATGTGCGCGCTCGAATTGCCTATTTGGAGG
GCATAGTGAAAGAATTCATCGATGCTGAAGACCTTTCCTCTCTCGAAGCA
CTGCAGGAGATCGGAGAGTCTTTGAATATTACCATCTCCGATTCCAATAT
CGAGGATATCAAGCTTGATTGTCCAGAGATCGATCCATACGAGCCAGAAC
AGGCTCAAGAGCTGCAAGGGTCTCAAGAGCCTCAAGAGCCTCAAGAGTCC
CAAGAGTCCCAAGAGTCCCAAGAGCCGCAGGTCTCTCAAGATCCGCAGCA
GGAAGCTAGGCCGACATCCACTGAGCAGAATGAGGAGCTTGTTCAGGACC
AGCAAGGACAGGATCAGTATATCGGTCCTGCAAGCTCCTATTTCTTCCAA
ATGAAGCTCAGGAGTCTCCTAGGACGTCAGCGCCAGCACCCGAGATGTCA
GATGTATCTCTTTGGTCCTAACCCTACCGAGGAGACTCTGAAACCATCTG
CTAGTGAGGTCCTCACAGATTTCGATGTCCGAGCGATTGCGATACCCTCG
CAACTTGGTGTCGATGCCGCTTGTCTGCCGTACTCGGTTCCTTTGCTGGA
TCATTTCGTCATCGAGGGACTTATTCGGGCTTATTTCGACTATGTCAACG
TCGACTTCCCTGTTCTCCATGAGGCCTCGTTCTTGGAGACCTTCAATAAA
TGGCGAGCTTCACCGGAGACGGTCGACCGACCGTGGGTCTGTAGTCTGTT
ATGCGTATTGATCCTGAGCCGGCGCATTATGCCGCTGGGGACGACTGAGA
CTCAGCAGCAAAAATGGTGGACTTATGTCGAGTCACTCTTGCCGAGCATA
ATCTTCACGAACAATATCCATTCAATCCAGGCATTGATGCTGGCTGCCTT
GCATCTTCACAACACCAATCATCGTGACGCATGCTGGACTCTGACTGGAG
TAGCAGCCCGAATCGCAGTTGCCATTGGACTCCATCGCGATGAAATAGTG
TGTGAAGGCCCGCAGTTGAATAGAGAGCTTAGAAGATCACTTTGGTGGAC
TCTCTACAGCTTCGAGCAGATACAGGTCTCCTCTCATGATCGGCCCAGTG
CCATAGAAAGCACATTGGGCTCCACTTCCCCCAATGAGAGAGTACTCAAC
ATCAATTCACCCAATTGGCCTGCAGATTATGCGCCCTGGTCGACAAAGCT
TGTCTCCATCCTAGGCCTCGTATGCCGCGCACTGCCAAATCTCACTAGCG
AGAGCGGTCTCTCCTCCGTCGCTGAATTACTTGGGGATCTGACTCTGTGG
CATACTTCGCTACCACAGCATTTGTCCCTCCAGGAATTCCATATGTTGCC
CGATGGACACAAGAGACCGGTTCTCTTACTGCATATTCAATATCATTATA
CAGTCTCTTTGCTCACTCGCCACTCATTGTTGCGACACCTTGCTTCCGCG
ACTCAGGGTCATACCAGTGACCTGAATGAAAGAGAACTCGAGACAATCGC
TAGGGTATGTTGTGAATCTGGTCGGAAAAGTTGCGAATTGTTGTTGCATC
TTGATCTGATCGGAAAGTTCAATGCTGTGACCTGGTGGGACATTTATTTC
GTGTATTCCTCGGCGTTGGTTATGACGCTGAGTATCTTGTCTGATCGCGT
GCGGCAGCAGGGTGAAGAGTATACTAATCATGAATCGCTCGCCCTGCTCC
ACAACTGTGCGCTCATTCTCAACCGTCACTCGGGTAACCCGATGGTACCC
GATACCATGCGTCGCTGGATTGGAGCTATCTATGACATCGACATGCTGGT
TCATGAAAGAGTAAGCCCAACGCAACAGACACCTTTCAACCAACAGGTTC
TTTCCAATCAACAGGTACCTTTCAATCAACAAGTGCCTTTCAATCAACAG
GTGCCATTCAACCAGCAGGTACCTTTCAACCAGCAAGCACCTTTCAACCA
GCAGGGTCATAGCATTGCTCATTCAGGTATCGCTAATACTCTCGTCGAGC
TCGGTTCTCAAAGAGATATGTATGGCTCCTTTTCCAGGAATGAGGAGTTC
TACCCCAGCGCAGAGCACAGTGCCTTCCAGATAAACCCAGAAATGGGTAT
GGTCATGAACGGCAACAATGTTCCTGGGATGCCCATGCCGGTTTGGGGTG
GTGATAATGAATATTTCTCTTGGGACTCAATCGGATGCATGTTGCTCGGG
GTGGAGACACTCAACAGTTCGTTCGGGCTGTGA
back to top

Coding sequence (CDS) from alignment at ch7:3237916..3240348-

>KJC3_010401-T1 ID=KJC3_010401-T1|Name=KJC3_010401-T1|organism=Aspergillus niger KJC3|type=CDS|length=2433bp|location=Sequence derived from alignment at ch7:3237916..3240348- (Aspergillus niger KJC3)
ATGACTACAGCCACGCAAAAGGCAGAAATGCGAAAAGCAGCTCGTCGAGT
GCCACTCGAACAGCGACAGCGCACGGCGCGCAGCTGTGATCGTTGTAAGG
CAAGAAAACACAAGTGCCTACAAATCCCTGGGCAAGCTCGCTGTCAGCAC
TGCGAACATTTCAATTATACCTGCAAGACCACCAAGCCTAGGAAGAAAAG
ACTTTATGGCAGCGCAGACAATGTGCGCGCTCGAATTGCCTATTTGGAGG
GCATAGTGAAAGAATTCATCGATGCTGAAGACCTTTCCTCTCTCGAAGCA
CTGCAGGAGATCGGAGAGTCTTTGAATATTACCATCTCCGATTCCAATAT
CGAGGATATCAAGCTTGATTGTCCAGAGATCGATCCATACGAGCCAGAAC
AGGCTCAAGAGCTGCAAGGGTCTCAAGAGCCTCAAGAGCCTCAAGAGTCC
CAAGAGTCCCAAGAGTCCCAAGAGCCGCAGGTCTCTCAAGATCCGCAGCA
GGAAGCTAGGCCGACATCCACTGAGCAGAATGAGGAGCTTGTTCAGGACC
AGCAAGGACAGGATCAGTATATCGGTCCTGCAAGCTCCTATTTCTTCCAA
ATGAAGCTCAGGAGTCTCCTAGGACGTCAGCGCCAGCACCCGAGATGTCA
GATGTATCTCTTTGGTCCTAACCCTACCGAGGAGACTCTGAAACCATCTG
CTAGTGAGGTCCTCACAGATTTCGATGTCCGAGCGATTGCGATACCCTCG
CAACTTGGTGTCGATGCCGCTTGTCTGCCGTACTCGGTTCCTTTGCTGGA
TCATTTCGTCATCGAGGGACTTATTCGGGCTTATTTCGACTATGTCAACG
TCGACTTCCCTGTTCTCCATGAGGCCTCGTTCTTGGAGACCTTCAATAAA
TGGCGAGCTTCACCGGAGACGGTCGACCGACCGTGGGTCTGTAGTCTGTT
ATGCGTATTGATCCTGAGCCGGCGCATTATGCCGCTGGGGACGACTGAGA
CTCAGCAGCAAAAATGGTGGACTTATGTCGAGTCACTCTTGCCGAGCATA
ATCTTCACGAACAATATCCATTCAATCCAGGCATTGATGCTGGCTGCCTT
GCATCTTCACAACACCAATCATCGTGACGCATGCTGGACTCTGACTGGAG
TAGCAGCCCGAATCGCAGTTGCCATTGGACTCCATCGCGATGAAATAGTG
TGTGAAGGCCCGCAGTTGAATAGAGAGCTTAGAAGATCACTTTGGTGGAC
TCTCTACAGCTTCGAGCAGATACAGGTCTCCTCTCATGATCGGCCCAGTG
CCATAGAAAGCACATTGGGCTCCACTTCCCCCAATGAGAGAGTACTCAAC
ATCAATTCACCCAATTGGCCTGCAGATTATGCGCCCTGGTCGACAAAGCT
TGTCTCCATCCTAGGCCTCGTATGCCGCGCACTGCCAAATCTCACTAGCG
AGAGCGGTCTCTCCTCCGTCGCTGAATTACTTGGGGATCTGACTCTGTGG
CATACTTCGCTACCACAGCATTTGTCCCTCCAGGAATTCCATATGTTGCC
CGATGGACACAAGAGACCGGTTCTCTTACTGCATATTCAATATCATTATA
CAGTCTCTTTGCTCACTCGCCACTCATTGTTGCGACACCTTGCTTCCGCG
ACTCAGGGTCATACCAGTGACCTGAATGAAAGAGAACTCGAGACAATCGC
TAGGGTATGTTGTGAATCTGGTCGGAAAAGTTGCGAATTGTTGTTGCATC
TTGATCTGATCGGAAAGTTCAATGCTGTGACCTGGTGGGACATTTATTTC
GTGTATTCCTCGGCGTTGGTTATGACGCTGAGTATCTTGTCTGATCGCGT
GCGGCAGCAGGGTGAAGAGTATACTAATCATGAATCGCTCGCCCTGCTCC
ACAACTGTGCGCTCATTCTCAACCGTCACTCGGGTAACCCGATGGTACCC
GATACCATGCGTCGCTGGATTGGAGCTATCTATGACATCGACATGCTGGT
TCATGAAAGAGTAAGCCCAACGCAACAGACACCTTTCAACCAACAGGTTC
TTTCCAATCAACAGGTACCTTTCAATCAACAAGTGCCTTTCAATCAACAG
GTGCCATTCAACCAGCAGGTACCTTTCAACCAGCAAGCACCTTTCAACCA
GCAGGGTCATAGCATTGCTCATTCAGGTATCGCTAATACTCTCGTCGAGC
TCGGTTCTCAAAGAGATATGTATGGCTCCTTTTCCAGGAATGAGGAGTTC
TACCCCAGCGCAGAGCACAGTGCCTTCCAGATAAACCCAGAAATGGGTAT
GGTCATGAACGGCAACAATGTTCCTGGGATGCCCATGCCGGTTTGGGGTG
GTGATAATGAATATTTCTCTTGGGACTCAATCGGATGCATGTTGCTCGGG
GTGGAGACACTCAACAGTTCGTTCGGGCTGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010401KJC3_010401Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010401-T1.cdsKJC3_010401-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010401-T1.exon1KJC3_010401-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010401-T1KJC3_010401-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR001138
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR007219
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3237916..3240348 -
Powered by Drupal