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KJC3_010404-T1, KJC3_010404-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010404-T1
Unique NameKJC3_010404-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3245011..3246064+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010404-T1 ID=KJC3_010404-T1|Name=KJC3_010404-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1054bp|location=Sequence derived from alignment at ch7:3245011..3246064+ (Aspergillus niger KJC3)
CATCACCTCACTTTCCACTGCTATCCATCTCCACAACCACAACCCGGCAG
CATGGATTACCAGGTAAGCACAATTATATTCTTTATATACAGACCACATT
ACTAACAAAACCCCCCTAAACAGAACCGCGCCGGTTCCAAATTTGGCGGC
GGCGGCGTCGCCTCCCACTCCGCAACGAACGCCGACCGACGCGAACGCCT
CCGCAAACTGGCCCTGGAAACGATCGACCTCGACAAAGACCCCTACTTCT
TCAAGAACCACGTCGGCAGCTTCGAATGCAGACTATGTCTCACAGTGCAC
CAAAACGACGGGTCCTACCTAGCGCACACGCAGGGGCGGAAACACCAAAC
GAACCTTGCGCGGCGCGCGGCGCGCGAACAGCGCGAGGGCAAGAACCAAG
ACCCGTCGTCCATTCCCGGGGCGATGGGCGTGCAGGTCAAGAAGCAGACG
ATCAAGATCGGACGGCCGGGGTACAAGATCACGAAGATTCGGGATCCGTT
GACGAGACAGCTGGGGATGTTGTTCCAGTTGCAGTATCAGGAGATTACGC
CGGGGGTTACGCCTAAGGTGCGGTTTATGTCGGCGTTTGAGCAGAAGGTG
GAGGAGCCGCCGGACAAGAATTTCCAGTATTTGGTTGTCGCTGCGGAGCC
GTATCAGACTTGTGGGTTTAAGTTGCAGGCGAGGGAGATTGATCGGCGCG
AGGGACGGTATTGGACTTGGTTTGATGAGGATAGTAAGGAGTTTTGGGTC
CAGATTATGTTCAAGACGGAGAGAGAGGAGAGGTTCTCGGGTGTGCCGGG
GTTGGCGCCTATTGAAAATAAGGCTTGATTTGGGGCCTTGTTGATTGTGT
TTTGAGGGGATGGGAGTGGTGAATGTTCTCATTGTTGCTGTTGATTTCCT
ATTGAAGGTCGGATCTGGCGTTTCATGGGCTTGCTTTGCTGGCAAAATGT
TGTGGCTATCGTTCTTTCTATTCTACTGCTGTGTGATGCATTAGGGTGGC
TTCGCATCAATACCATGCCCTCTTTTTACTTCTAATGATACGATTTACCA
ACGA
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Coding sequence (CDS) from alignment at ch7:3245011..3246064+

>KJC3_010404-T1 ID=KJC3_010404-T1|Name=KJC3_010404-T1|organism=Aspergillus niger KJC3|type=CDS|length=1434bp|location=Sequence derived from alignment at ch7:3245011..3246064+ (Aspergillus niger KJC3)
ATGGATTACCAGAACCGCGCCGGTTCCAAATTTGGCGGCGGCGGCGTCGC
CTCCCACTCCGCAACGAACGCCGACCGACGCGAACGCCTCCGCAAACTGG
CCCTGGAAACGATCGACCTCGACAAAGACCCCTACTTCTTCAAGAACCAC
GTCGGCAGCTTCGAATGCAGACTATGTCTCACAGTGCACCAAAACGACGG
GTCCTACCTAGCGCACACGCAGGGGCGGAAACACCAAACGAACCTTGCGC
GGCGCGCGGCGCGCGAACAGCGCGAGGGCAAGAACCAAGACCCGTCGTCC
ATTCCCGGGGCGATGGGCGTGCAGGTCAAGAAGCAGACGATCAAGATCGG
ACGGCCGGGGTACAAGATCACGAAGATTCGGGATCCGTTGACGAGACAGC
TGGGGATGTTGTTCCAGTTGCAGTATCAGGAGATTACGCCGGGGGTTACG
CCTAAGGTGCGGTTTATGTCGGCGTTTGAGCAGAAGGTGGAGGAGCCGCC
GGACAAGAATTTCCAGTATTTGGTTGTCGCTGCGGAGCCGTATCAGACTT
GTGGGTTTAAGTTGCAGGCGAGGGAGATTGATCGGCGCGAGGGACGGTAT
TGGACTTGGTTTGATGAGGATAGTAAGGAGTTTTGGGTCCAGATTATGTT
CAAGACGGAGAGAGAGGAGAGGTTCTCGGGTGTGCCGGGGTTGGCGCCTA
TTGAAAATAAGGCTTGAATGGATTACCAGAACCGCGCCGGTTCCAAATTT
GGCGGCGGCGGCGTCGCCTCCCACTCCGCAACGAACGCCGACCGACGCGA
ACGCCTCCGCAAACTGGCCCTGGAAACGATCGACCTCGACAAAGACCCCT
ACTTCTTCAAGAACCACGTCGGCAGCTTCGAATGCAGACTATGTCTCACA
GTGCACCAAAACGACGGGTCCTACCTAGCGCACACGCAGGGGCGGAAACA
CCAAACGAACCTTGCGCGGCGCGCGGCGCGCGAACAGCGCGAGGGCAAGA
ACCAAGACCCGTCGTCCATTCCCGGGGCGATGGGCGTGCAGGTCAAGAAG
CAGACGATCAAGATCGGACGGCCGGGGTACAAGATCACGAAGATTCGGGA
TCCGTTGACGAGACAGCTGGGGATGTTGTTCCAGTTGCAGTATCAGGAGA
TTACGCCGGGGGTTACGCCTAAGGTGCGGTTTATGTCGGCGTTTGAGCAG
AAGGTGGAGGAGCCGCCGGACAAGAATTTCCAGTATTTGGTTGTCGCTGC
GGAGCCGTATCAGACTTGTGGGTTTAAGTTGCAGGCGAGGGAGATTGATC
GGCGCGAGGGACGGTATTGGACTTGGTTTGATGAGGATAGTAAGGAGTTT
TGGGTCCAGATTATGTTCAAGACGGAGAGAGAGGAGAGGTTCTCGGGTGT
GCCGGGGTTGGCGCCTATTGAAAATAAGGCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010404KJC3_010404Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010404-T1.utr5p1KJC3_010404-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010404-T1.exon1KJC3_010404-T1.exon1Aspergillus niger KJC3exon
KJC3_010404-T1.exon2KJC3_010404-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010404-T1.cdsKJC3_010404-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010404-T1.utr3p1KJC3_010404-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010404-T1KJC3_010404-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092653YS
DBxrefInterPro:IPR000690
DBxrefInterPro:IPR031781
DBxrefInterPro:IPR003604
DBxrefPFAM:PF12874
DBxrefPFAM:PF16835
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3245011..3246064 +
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