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KJC3_010409-T1, KJC3_010409-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010409-T1
Unique NameKJC3_010409-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3256213..3258753+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010409-T1 ID=KJC3_010409-T1|Name=KJC3_010409-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2541bp|location=Sequence derived from alignment at ch7:3256213..3258753+ (Aspergillus niger KJC3)
CAGAATAGGTTAGCATTCTGAAATCACGGGACTACGTGATGGTCGACGCG
CGCCACGACTTTCTGATTCAGCCTCTGCTCGAGCCGCGTTATTTCATTGA
ATTGACTCTATACACTTTCTTGAGGCTATTCTGGAGCGAGTATTGATTTG
AAGGGGTAAGAATCCACGCCATCCTATTCCATTTTGCGACAGAAACTGTC
AACATCGAACACCATGCCGGAGCTAGCGGAAGTCTCGCGTATAGTCCATT
TCCTTCGTCAACATCTTGTCGGCAAAACGCTTTCCAAGGTGTCAGTGCAA
AACGATGACATTATCTACGGCAAAGCCGGTACTACTGCTGCCGAGTTTCA
GAAGGCAATGGAGGGGAAGAAAGTTACTGGTGCCGGACAGCAGGGCAAGT
ACTTCTGGATTGCTATGTCATCACCACCCCATGCGGTTATGCATTTCGGT
ATGGCGGGCTGGCTGAAAATCCGGGATGCCGACACCTATTACTACCGGAC
AGACAAACCTGGAGATAAGGAGTGGCCGCCAAAATACTGGAAATTCTTGC
TCGAAACCGAGGGAGATCCAAAGACAGAAGCTGCTTTTGTTGACTTTCGC
CGACTGGGCAGAATACGCCTGGTAGACTGTCCCGCGGAGGAAATCCGTAA
CTACAGCCCTCTGAAAGAGAATGGCCCAGATCCTGTCGCCGATAAAGACA
TTGTGTCGGAGGAGTGGCTGGCAAAGAAGCTCCGAAGCAAGAAGGTACCT
GTGAAGGCGCTGCTCCTTGATCAAGCGAATATCAGCGGAATAGGCAACTG
GATGGGGTATGCTCCTTCAGTCTCCCACCATGACTGATTACATCTAGCTG
ACTGATTTCTAGCGATGAGATCCTCTACCAAGCTAAAATACACCCTGAGC
AATACAGCAACACTTTGGATGACGACCAGATTAGAGAGCTGCACTCAGCG
ATACATTATATCTGTTCCACCTCCGTAGAGCTTCTAGCAGATTCGGAGAA
ATTTCCAGCTGACTGGCTGTTCAAACATCGGTGGAGTAAAGGCAAGAAGA
ACACGCCATCAGTGCTGCCAAACGGAGAAAAGATTACCTTTCTCACGGTA
GGGGGCAGGACCAGCGCAGTGGTTCCGAGTGTGCAGAAAAAAACTGGGCC
AGTAGCCAAGGACGTCAGCAGTGAAGACGCCAGCAATGCGCCGGCAAACT
CGAAGCGAAAGCGGGCTTCAGTGAAAAAGGAGGAGAGCGAGCCGGAAGCT
AGCGAAGAGGATACGAAGCCCAAGAAGACCGGGCCCAAAAGGCAAAGCAG
AACTTCTGTCAAGAAGGAAGACATCGATGAGACAGAGACTAAGCCGATAG
AAGAACAGCAAACTACCAGGAGACGCTCGGGCCGACTTCGAAAGTAGGGG
ATTCCGACTGTTGTATTATTGTGGCCATCTTAGCGACGTATTAGAAGATG
CGACCTTCCGCTCATTATTATACTGATTCTTTATCTAATATTATATACCA
CTTTTCCTAGTTTACCTGTTCATACCTTCAGTCCGTGCAGCCTTTCCCGG
AAGACATCAAAATTGCTGTCACCCTGGGCAACTTTGGACATCTCATCTAA
AACCGCAAATACAATCTTCTCCCACCATCCCTGAAATTCAGTTTCCCGCA
GGACCTCGGACCAACATTGCGCAACGTCAACATTTGGGTTCGCAAATGCA
CCACAACCTAGAGCTCCTAGAACAATTCTCCGATGCTTCTTATACCCTGC
AATGCGGAGGATAGATCGCATCTTGTCTTTGGTCAGTTCTCGATCAGAAC
GAAACTTAAAAGTCGGTGGAGTCGCCGTATAGTCCACCTCTGGTCCTTCC
AGGGCAGCAACGCTGATAACGCTCACAATAGGGAGATTCTCAGGCTTCTG
CAGGTCCATCAGCCCATGACCTCGTGTGAAACTTTCACGGAAGATAACGA
CGGATGGAGAATAGATGGCATCTCGTTCTCCTATCGGATAGTATCGGTGT
TTAAGGGTGGAGCTGAGGCTGCTTCGATAACAAAGAGCCTCCTCCTGAGC
CATAGCTCCATTACGCCAACCGCCGCCTGGATTCCTTTCATTGGCCATAT
TCAGAACGCACACATTCCGTGTGTCAGTCTGCCGGAATTGCCTGGATGAG
CTGTTAACCCTAATGGCGATGTCGAGCGTATCTCCAAATATGACTTCGAC
ATGGGTTGATAGCTTTGGGCTGAACCTTGGGTTCAAAGTAGCATATTTGA
TGCGGGGACAGTACTGTGCTGTCGGAGGTGCCCGGGGCACCGTACTTAAA
ATGCCAGGGAGAAGGGCTTGAGTCTCTTCCGCGGTTGCTCTCAGTATTGC
TCTCCTATCGGCTCCGGAAATAGGCCGTTGTCGCACATTGACCGGTCGAA
AGTAGTCCGGTAATGTCTTTTGGCTCATCTTCAGAGATGTCGCCTGCTGT
AAAACAATGTAAGTTCAATGTGAGATTGATCTGGCTATACGTTTGTTAAT
GTAGCGCGTCGCAAGACTTGACGGTAAGAGCGGACTTAGGC
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Coding sequence (CDS) from alignment at ch7:3256213..3258753+

>KJC3_010409-T1 ID=KJC3_010409-T1|Name=KJC3_010409-T1|organism=Aspergillus niger KJC3|type=CDS|length=2256bp|location=Sequence derived from alignment at ch7:3256213..3258753+ (Aspergillus niger KJC3)
ATGCCGGAGCTAGCGGAAGTCTCGCGTATAGTCCATTTCCTTCGTCAACA
TCTTGTCGGCAAAACGCTTTCCAAGGTGTCAGTGCAAAACGATGACATTA
TCTACGGCAAAGCCGGTACTACTGCTGCCGAGTTTCAGAAGGCAATGGAG
GGGAAGAAAGTTACTGGTGCCGGACAGCAGGGCAAGTACTTCTGGATTGC
TATGTCATCACCACCCCATGCGGTTATGCATTTCGGTATGGCGGGCTGGC
TGAAAATCCGGGATGCCGACACCTATTACTACCGGACAGACAAACCTGGA
GATAAGGAGTGGCCGCCAAAATACTGGAAATTCTTGCTCGAAACCGAGGG
AGATCCAAAGACAGAAGCTGCTTTTGTTGACTTTCGCCGACTGGGCAGAA
TACGCCTGGTAGACTGTCCCGCGGAGGAAATCCGTAACTACAGCCCTCTG
AAAGAGAATGGCCCAGATCCTGTCGCCGATAAAGACATTGTGTCGGAGGA
GTGGCTGGCAAAGAAGCTCCGAAGCAAGAAGGTACCTGTGAAGGCGCTGC
TCCTTGATCAAGCGAATATCAGCGGAATAGGCAACTGGATGGGCGATGAG
ATCCTCTACCAAGCTAAAATACACCCTGAGCAATACAGCAACACTTTGGA
TGACGACCAGATTAGAGAGCTGCACTCAGCGATACATTATATCTGTTCCA
CCTCCGTAGAGCTTCTAGCAGATTCGGAGAAATTTCCAGCTGACTGGCTG
TTCAAACATCGGTGGAGTAAAGGCAAGAAGAACACGCCATCAGTGCTGCC
AAACGGAGAAAAGATTACCTTTCTCACGGTAGGGGGCAGGACCAGCGCAG
TGGTTCCGAGTGTGCAGAAAAAAACTGGGCCAGTAGCCAAGGACGTCAGC
AGTGAAGACGCCAGCAATGCGCCGGCAAACTCGAAGCGAAAGCGGGCTTC
AGTGAAAAAGGAGGAGAGCGAGCCGGAAGCTAGCGAAGAGGATACGAAGC
CCAAGAAGACCGGGCCCAAAAGGCAAAGCAGAACTTCTGTCAAGAAGGAA
GACATCGATGAGACAGAGACTAAGCCGATAGAAGAACAGCAAACTACCAG
GAGACGCTCGGGCCGACTTCGAAAGTAGATGCCGGAGCTAGCGGAAGTCT
CGCGTATAGTCCATTTCCTTCGTCAACATCTTGTCGGCAAAACGCTTTCC
AAGGTGTCAGTGCAAAACGATGACATTATCTACGGCAAAGCCGGTACTAC
TGCTGCCGAGTTTCAGAAGGCAATGGAGGGGAAGAAAGTTACTGGTGCCG
GACAGCAGGGCAAGTACTTCTGGATTGCTATGTCATCACCACCCCATGCG
GTTATGCATTTCGGTATGGCGGGCTGGCTGAAAATCCGGGATGCCGACAC
CTATTACTACCGGACAGACAAACCTGGAGATAAGGAGTGGCCGCCAAAAT
ACTGGAAATTCTTGCTCGAAACCGAGGGAGATCCAAAGACAGAAGCTGCT
TTTGTTGACTTTCGCCGACTGGGCAGAATACGCCTGGTAGACTGTCCCGC
GGAGGAAATCCGTAACTACAGCCCTCTGAAAGAGAATGGCCCAGATCCTG
TCGCCGATAAAGACATTGTGTCGGAGGAGTGGCTGGCAAAGAAGCTCCGA
AGCAAGAAGGTACCTGTGAAGGCGCTGCTCCTTGATCAAGCGAATATCAG
CGGAATAGGCAACTGGATGGGCGATGAGATCCTCTACCAAGCTAAAATAC
ACCCTGAGCAATACAGCAACACTTTGGATGACGACCAGATTAGAGAGCTG
CACTCAGCGATACATTATATCTGTTCCACCTCCGTAGAGCTTCTAGCAGA
TTCGGAGAAATTTCCAGCTGACTGGCTGTTCAAACATCGGTGGAGTAAAG
GCAAGAAGAACACGCCATCAGTGCTGCCAAACGGAGAAAAGATTACCTTT
CTCACGGTAGGGGGCAGGACCAGCGCAGTGGTTCCGAGTGTGCAGAAAAA
AACTGGGCCAGTAGCCAAGGACGTCAGCAGTGAAGACGCCAGCAATGCGC
CGGCAAACTCGAAGCGAAAGCGGGCTTCAGTGAAAAAGGAGGAGAGCGAG
CCGGAAGCTAGCGAAGAGGATACGAAGCCCAAGAAGACCGGGCCCAAAAG
GCAAAGCAGAACTTCTGTCAAGAAGGAAGACATCGATGAGACAGAGACTA
AGCCGATAGAAGAACAGCAAACTACCAGGAGACGCTCGGGCCGACTTCGA
AAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003684damaged DNA binding
GO:0008270zinc ion binding
GO:0016799hydrolase activity, hydrolyzing N-glycosyl compounds
GO:0003906DNA-(apurinic or apyrimidinic site) endonuclease activity
Vocabulary: Biological Process
TermDefinition
GO:0006289nucleotide-excision repair
GO:0006284base-excision repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010409KJC3_010409Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010409-T1KJC3_010409-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010409-T1.utr5p1KJC3_010409-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010409-T1.exon1KJC3_010409-T1.exon1Aspergillus niger KJC3exon
KJC3_010409-T1.exon2KJC3_010409-T1.exon2Aspergillus niger KJC3exon
KJC3_010409-T1.exon3KJC3_010409-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010409-T1.cdsKJC3_010409-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010409-T1.utr3p1KJC3_010409-T1.utr3p1Aspergillus niger KJC3three_prime_UTR
KJC3_010409-T1.utr3p2KJC3_010409-T1.utr3p2Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR010979
DBxrefInterPro:IPR035937
DBxrefInterPro:IPR015886
DBxrefInterPro:IPR012319
DBxrefPFAM:PF06831
DBxrefPFAM:PF01149
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3256213..3258753 +
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