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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3276297..3278483+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010418-T1 ID=KJC3_010418-T1|Name=KJC3_010418-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2187bp|location=Sequence derived from alignment at ch7:3276297..3278483+ (Aspergillus niger KJC3)
ATATCGCATTCCATAGGCCGATTCACCAAGTGCACTACGCTCTTTCCAGC
TGATCGAACTTAATATTTATCTCTATTTCTCGAACGCCTCGCCTACGATG
ACCTCCCTCTTCTTCTCCACGCCCGTCGACATCGATGTGGTCCTCGAAGA
CAGCGATGAGCGTCAGACGGTTGATGTCAAGCTCGACAAGGGCCGTCGCG
AGAGGGTCCCCCTCTACATGGACGGAGAGTCTGTCAAGGGTGCTGTGACG
GTCAGACCTAAGGATGGAAAGCGTTTGGAACACACGGGCATCAAAGTGCA
ATTCATTGGCACGATCGGTATGGAACAATGGCTCTCATGAGGGGGCGGGC
ACACCTCATCACCATCCCCACCGCACAGTTGCTCGAAGACTTCAAGTCTC
GATGCTGACACACAATTGTTACGATTAGAAATGTTCTATGACCGCGGTAA
CCACTACGAATTCCTGTCGCTGGTACAGGAGCTCGCAGCTCCCGGAGAAC
TGCAGCACCCCCAGACCTTCCCGTTCAACTTCAAGAATATCGAGAAGCAA
TACGAATCATACAACGGTATCAATGTTAAGCTACGATACTTTGTCCGCGT
GACAGTGTCCAGGCGCATGGCGGACGTGATTCGGGAAAAGGACCTCTGGG
TCTACTCCTACCGCATGCCCCCGGAGACCAACAGCCCCATCAAGATGGAC
GTTGGTATCGAAGATTGCCTGCACATTGAGTTCGAATACTCCAAATCCAA
GTACCACCTCAAGGATGTCATCGTGGGACGCATCTACTTCCTCCTCGTGC
GCTTGAAGATCAAACACATGGAGCTATCCATCATCCGTCGTGAGACGACT
GGATCTCCGCCAAACCAGTACAACGAAAGTGAGACGCTCGTGCGCTTCGA
GGTAAGACTGAATCCAACTTGAATCGCTGTATGACGTCCGAAGCACTAAC
ATGCTGCGCGCAGATCATGGATGGATCACCTTCCCGAGGTAAGTCGATGG
CTCGGACTCACCTGGCTCTCAGACACCGCAACACGTCACATCTGCGGCAT
TGTCACAGCCGAACATCTCTTCTGACCTATTTCTAGGTGAAACCATCCCC
ATCCGTCTGTTCCTGGGGGGATTTGACCTCACCCCGACATTCCGCGACGT
GAACAAGAAGTATTCGACACGCTACTACCTCAGCCTGGTGCTTATCGACG
AAGGTACGTGATGCTACATCCATTTGCGTTTCATCTGCGTTTTAGCCTTG
TTTTGCGACTGCCGTTCATGAATCCCGTCTGGCGTGGGAGCACCACATCG
GCCATCCCACGCATGTGAGACCAGGCCTTGGGTTGCAAAGGCGTGGTGGC
TAGCTAGCCGGCCCACTTCCTCCATACCATCATCCCACGGCATCCCACCA
CCCAGGTCAATAGCCGGTCGGCTATTGAAACCCTTAATCGGGCCGAAAAC
CTGCAATCTGGCCAGTGGCCACAGTTGGGGTGTTTCCCCCCGTGACTAAC
CCCCACGCTAAACCTCAAACTATTCTGGTCTCGCGTGGTGGCCCCACCGG
CCCCAGTTCCCTCCCGTTTTCTCTGCCTTCCGGAAGTTTCGATCGTCACA
TTCGAACCCCCATCTTGCTAACCCGGGTCTATACAGACGCTCGCCGTTAC
TTCAAGCAATCCGAAATTGTCCTCTACCGTCAAGCTCCCGAGATCGCCAC
CACCCCTCAAATCGCCCAGCAGCAACAGATCCAACAACAGCAGCTCCTCC
AACAGCAGCAGCAACAGCAACAGCTGCCTGCCGGTTCGGCGACAGCCGGC
CCCGGACGGACTGACACCCAGCCTCAGTTCACTCAGCAAATCTCTGCTCA
GGCGGCTTGATTCAATCTGTGCGCGTCTCGTGCTGTAGCGAAATAGATCG
TCTTTTGTTCATGGGCTGCTACTGATGCTGATGCTGTGCTGTGCTGCGCT
GTGTCAGACTTCCGTTTGATGTTACCTAACTTTACCCATTATACCCTTCT
GTGTATTAACCTATTTCTGGCTGTATTTCTCTGTACGTTATGATGAAATC
TCAGCAACATGAAACTTTATGATTTCGTTACGTATTCGATCCTTTATATT
CGTTTATCTTGCGATGGTACGGAAGGTAGCAGACATAGTTTTCACTAAAC
TACAGCACTGGTGTGCCAAAATGCTGATAAGGCTTTA back to topCoding sequence (CDS) from alignment at ch7:3276297..3278483+ >KJC3_010418-T1 ID=KJC3_010418-T1|Name=KJC3_010418-T1|organism=Aspergillus niger KJC3|type=CDS|length=5295bp|location=Sequence derived from alignment at ch7:3276297..3278483+ (Aspergillus niger KJC3)
ATGACCTCCCTCTTCTTCTCCACGCCCGTCGACATCGATGTGGTCCTCGA
AGACAGCGATGAGCGTCAGACGGTTGATGTCAAGCTCGACAAGGGCCGTC
GCGAGAGGGTCCCCCTCTACATGGACGGAGAGTCTGTCAAGGGTGCTGTG
ACGGTCAGACCTAAGGATGGAAAGCGTTTGGAACACACGGGCATCAAAGT
GCAATTCATTGGCACGATCGAAATGTTCTATGACCGCGGTAACCACTACG
AATTCCTGTCGCTGGTACAGGAGCTCGCAGCTCCCGGAGAACTGCAGCAC
CCCCAGACCTTCCCGTTCAACTTCAAGAATATCGAGAAGCAATACGAATC
ATACAACGGTATCAATGTTAAGCTACGATACTTTGTCCGCGTGACAGTGT
CCAGGCGCATGGCGGACGTGATTCGGGAAAAGGACCTCTGGGTCTACTCC
TACCGCATGCCCCCGGAGACCAACAGCCCCATCAAGATGGACGTTGGTAT
CGAAGATTGCCTGCACATTGAGTTCGAATACTCCAAATCCAAGTACCACC
TCAAGGATGTCATCGTGGGACGCATCTACTTCCTCCTCGTGCGCTTGAAG
ATCAAACACATGGAGCTATCCATCATCCGTCGTGAGACGACTGGATCTCC
GCCAAACCAGTACAACGAAAGTGAGACGCTCGTGCGCTTCGAGATCATGG
ATGGATCACCTTCCCGAGGTGAAACCATCCCCATCCGTCTGTTCCTGGGG
GGATTTGACCTCACCCCGACATTCCGCGACGTGAACAAGAAGTATTCGAC
ACGCTACTACCTCAGCCTGGTGCTTATCGACGAAGACGCTCGCCGTTACT
TCAAGCAATCCGAAATTGTCCTCTACCGTCAAGCTCCCGAGATCGCCACC
ACCCCTCAAATCGCCCAGCAGCAACAGATCCAACAACAGCAGCTCCTCCA
ACAGCAGCAGCAACAGCAACAGCTGCCTGCCGGTTCGGCGACAGCCGGCC
CCGGACGGACTGACACCCAGCCTCAGTTCACTCAGCAAATCTCTGCTCAG
GCGGCTTGAATGACCTCCCTCTTCTTCTCCACGCCCGTCGACATCGATGT
GGTCCTCGAAGACAGCGATGAGCGTCAGACGGTTGATGTCAAGCTCGACA
AGGGCCGTCGCGAGAGGGTCCCCCTCTACATGGACGGAGAGTCTGTCAAG
GGTGCTGTGACGGTCAGACCTAAGGATGGAAAGCGTTTGGAACACACGGG
CATCAAAGTGCAATTCATTGGCACGATCGAAATGTTCTATGACCGCGGTA
ACCACTACGAATTCCTGTCGCTGGTACAGGAGCTCGCAGCTCCCGGAGAA
CTGCAGCACCCCCAGACCTTCCCGTTCAACTTCAAGAATATCGAGAAGCA
ATACGAATCATACAACGGTATCAATGTTAAGCTACGATACTTTGTCCGCG
TGACAGTGTCCAGGCGCATGGCGGACGTGATTCGGGAAAAGGACCTCTGG
GTCTACTCCTACCGCATGCCCCCGGAGACCAACAGCCCCATCAAGATGGA
CGTTGGTATCGAAGATTGCCTGCACATTGAGTTCGAATACTCCAAATCCA
AGTACCACCTCAAGGATGTCATCGTGGGACGCATCTACTTCCTCCTCGTG
CGCTTGAAGATCAAACACATGGAGCTATCCATCATCCGTCGTGAGACGAC
TGGATCTCCGCCAAACCAGTACAACGAAAGTGAGACGCTCGTGCGCTTCG
AGATCATGGATGGATCACCTTCCCGAGGTGAAACCATCCCCATCCGTCTG
TTCCTGGGGGGATTTGACCTCACCCCGACATTCCGCGACGTGAACAAGAA
GTATTCGACACGCTACTACCTCAGCCTGGTGCTTATCGACGAAGACGCTC
GCCGTTACTTCAAGCAATCCGAAATTGTCCTCTACCGTCAAGCTCCCGAG
ATCGCCACCACCCCTCAAATCGCCCAGCAGCAACAGATCCAACAACAGCA
GCTCCTCCAACAGCAGCAGCAACAGCAACAGCTGCCTGCCGGTTCGGCGA
CAGCCGGCCCCGGACGGACTGACACCCAGCCTCAGTTCACTCAGCAAATC
TCTGCTCAGGCGGCTTGAATGACCTCCCTCTTCTTCTCCACGCCCGTCGA
CATCGATGTGGTCCTCGAAGACAGCGATGAGCGTCAGACGGTTGATGTCA
AGCTCGACAAGGGCCGTCGCGAGAGGGTCCCCCTCTACATGGACGGAGAG
TCTGTCAAGGGTGCTGTGACGGTCAGACCTAAGGATGGAAAGCGTTTGGA
ACACACGGGCATCAAAGTGCAATTCATTGGCACGATCGAAATGTTCTATG
ACCGCGGTAACCACTACGAATTCCTGTCGCTGGTACAGGAGCTCGCAGCT
CCCGGAGAACTGCAGCACCCCCAGACCTTCCCGTTCAACTTCAAGAATAT
CGAGAAGCAATACGAATCATACAACGGTATCAATGTTAAGCTACGATACT
TTGTCCGCGTGACAGTGTCCAGGCGCATGGCGGACGTGATTCGGGAAAAG
GACCTCTGGGTCTACTCCTACCGCATGCCCCCGGAGACCAACAGCCCCAT
CAAGATGGACGTTGGTATCGAAGATTGCCTGCACATTGAGTTCGAATACT
CCAAATCCAAGTACCACCTCAAGGATGTCATCGTGGGACGCATCTACTTC
CTCCTCGTGCGCTTGAAGATCAAACACATGGAGCTATCCATCATCCGTCG
TGAGACGACTGGATCTCCGCCAAACCAGTACAACGAAAGTGAGACGCTCG
TGCGCTTCGAGATCATGGATGGATCACCTTCCCGAGGTGAAACCATCCCC
ATCCGTCTGTTCCTGGGGGGATTTGACCTCACCCCGACATTCCGCGACGT
GAACAAGAAGTATTCGACACGCTACTACCTCAGCCTGGTGCTTATCGACG
AAGACGCTCGCCGTTACTTCAAGCAATCCGAAATTGTCCTCTACCGTCAA
GCTCCCGAGATCGCCACCACCCCTCAAATCGCCCAGCAGCAACAGATCCA
ACAACAGCAGCTCCTCCAACAGCAGCAGCAACAGCAACAGCTGCCTGCCG
GTTCGGCGACAGCCGGCCCCGGACGGACTGACACCCAGCCTCAGTTCACT
CAGCAAATCTCTGCTCAGGCGGCTTGAATGACCTCCCTCTTCTTCTCCAC
GCCCGTCGACATCGATGTGGTCCTCGAAGACAGCGATGAGCGTCAGACGG
TTGATGTCAAGCTCGACAAGGGCCGTCGCGAGAGGGTCCCCCTCTACATG
GACGGAGAGTCTGTCAAGGGTGCTGTGACGGTCAGACCTAAGGATGGAAA
GCGTTTGGAACACACGGGCATCAAAGTGCAATTCATTGGCACGATCGAAA
TGTTCTATGACCGCGGTAACCACTACGAATTCCTGTCGCTGGTACAGGAG
CTCGCAGCTCCCGGAGAACTGCAGCACCCCCAGACCTTCCCGTTCAACTT
CAAGAATATCGAGAAGCAATACGAATCATACAACGGTATCAATGTTAAGC
TACGATACTTTGTCCGCGTGACAGTGTCCAGGCGCATGGCGGACGTGATT
CGGGAAAAGGACCTCTGGGTCTACTCCTACCGCATGCCCCCGGAGACCAA
CAGCCCCATCAAGATGGACGTTGGTATCGAAGATTGCCTGCACATTGAGT
TCGAATACTCCAAATCCAAGTACCACCTCAAGGATGTCATCGTGGGACGC
ATCTACTTCCTCCTCGTGCGCTTGAAGATCAAACACATGGAGCTATCCAT
CATCCGTCGTGAGACGACTGGATCTCCGCCAAACCAGTACAACGAAAGTG
AGACGCTCGTGCGCTTCGAGATCATGGATGGATCACCTTCCCGAGGTGAA
ACCATCCCCATCCGTCTGTTCCTGGGGGGATTTGACCTCACCCCGACATT
CCGCGACGTGAACAAGAAGTATTCGACACGCTACTACCTCAGCCTGGTGC
TTATCGACGAAGACGCTCGCCGTTACTTCAAGCAATCCGAAATTGTCCTC
TACCGTCAAGCTCCCGAGATCGCCACCACCCCTCAAATCGCCCAGCAGCA
ACAGATCCAACAACAGCAGCTCCTCCAACAGCAGCAGCAACAGCAACAGC
TGCCTGCCGGTTCGGCGACAGCCGGCCCCGGACGGACTGACACCCAGCCT
CAGTTCACTCAGCAAATCTCTGCTCAGGCGGCTTGAATGACCTCCCTCTT
CTTCTCCACGCCCGTCGACATCGATGTGGTCCTCGAAGACAGCGATGAGC
GTCAGACGGTTGATGTCAAGCTCGACAAGGGCCGTCGCGAGAGGGTCCCC
CTCTACATGGACGGAGAGTCTGTCAAGGGTGCTGTGACGGTCAGACCTAA
GGATGGAAAGCGTTTGGAACACACGGGCATCAAAGTGCAATTCATTGGCA
CGATCGAAATGTTCTATGACCGCGGTAACCACTACGAATTCCTGTCGCTG
GTACAGGAGCTCGCAGCTCCCGGAGAACTGCAGCACCCCCAGACCTTCCC
GTTCAACTTCAAGAATATCGAGAAGCAATACGAATCATACAACGGTATCA
ATGTTAAGCTACGATACTTTGTCCGCGTGACAGTGTCCAGGCGCATGGCG
GACGTGATTCGGGAAAAGGACCTCTGGGTCTACTCCTACCGCATGCCCCC
GGAGACCAACAGCCCCATCAAGATGGACGTTGGTATCGAAGATTGCCTGC
ACATTGAGTTCGAATACTCCAAATCCAAGTACCACCTCAAGGATGTCATC
GTGGGACGCATCTACTTCCTCCTCGTGCGCTTGAAGATCAAACACATGGA
GCTATCCATCATCCGTCGTGAGACGACTGGATCTCCGCCAAACCAGTACA
ACGAAAGTGAGACGCTCGTGCGCTTCGAGATCATGGATGGATCACCTTCC
CGAGGTGAAACCATCCCCATCCGTCTGTTCCTGGGGGGATTTGACCTCAC
CCCGACATTCCGCGACGTGAACAAGAAGTATTCGACACGCTACTACCTCA
GCCTGGTGCTTATCGACGAAGACGCTCGCCGTTACTTCAAGCAATCCGAA
ATTGTCCTCTACCGTCAAGCTCCCGAGATCGCCACCACCCCTCAAATCGC
CCAGCAGCAACAGATCCAACAACAGCAGCTCCTCCAACAGCAGCAGCAAC
AGCAACAGCTGCCTGCCGGTTCGGCGACAGCCGGCCCCGGACGGACTGAC
ACCCAGCCTCAGTTCACTCAGCAAATCTCTGCTCAGGCGGCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006886 | intracellular protein transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010418-T1.utr5p1 | KJC3_010418-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010418-T1.utr3p1 | KJC3_010418-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092632FC |
| DBxref | InterPro:IPR014752 |
| DBxref | InterPro:IPR028934 |
| DBxref | PFAM:PF03643 |
| Product | Vacuolar protein sorting-associated protein 26 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3276297..3278483 + |
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