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KJC3_010420-T1, KJC3_010420-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010420-T1
Unique NameKJC3_010420-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3284550..3285825+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010420-T1 ID=KJC3_010420-T1|Name=KJC3_010420-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1276bp|location=Sequence derived from alignment at ch7:3284550..3285825+ (Aspergillus niger KJC3)
GCCGGAAGTGGGATAAGGTCACAGTGCCCCTCCTCCGCCCCGAGGATCAA
ACGTCTCCCTTACAACTCACTATTTCGCATTATTCATTTTCAACTTAACC
CTGCCTCTTACCTGCACGATGGCAGCTAAAGTGCCCAGAAACTTCAGACT
GCTCGAAGAGCTGGAGAAGGGTGAGAAGGGTCTGGGAGCTGGTAAGTGCT
ATTCTACTTATAGTCATAGGAGACTCATTTCGTTGACATATTCCTATCGC
TGTAACTTAGAGTCATGCTCCTATGGTCTTGCAGATGGTGAAGACATGAT
GATGAGTAACTGGAACGGAACTATTCTTGGCCCCCCTCACGTTCGTCCCA
CGCTTCCGACTCGCATCCATTATACTATACAATAGCATCACTGACATTAT
GAACGAGCGCAGAGTGTCCATGAGAACAGAATTTACAGCGTCAACATCCA
TTGCGGTCCGGACTATCCCGACAACCCCCCTACCATCCAATTCGTATCCC
GAGTCAACTTGCCATGCGTTGATGGCCGGAGCGGAAAGGTAAGGATTCGT
TCTATTTCGACTGCTACTATATGGAAGATTCCAAGTCTGACTTCAATCTA
GGTCGATCCTACCAAGCTGCCCTGCTTGGCTCAGTGGAAGCGCGACTATA
CCATGGAAACTATTCTAGTCGAGCTCAGAAGGTAATCATGTCCTGACCTT
CAGGCCATCGGTGACTTGATACTAATAGTTCCTAGATATATGGCTCTGCC
TCAGCACAAGAAGCTTCCCCAGCCTCCGGAAGGCTCGAACTTCTAAATTG
ACGGTATCATGACTGGACGTGGATTCGAAAGCGGAGTATATGGTTGGTTT
CTAAGTCAGGTTCATCTGCATTTCTCTTCAATAGCTTATTAGAGCATGTA
CAGTCTATGCATAACGGCGGGCATGGCGCGGTCTTCTTTGAAGCCTAGTT
GCAATTCATCGAATTAGAACTTTGCTCAGTATGAACCATGTGCCACTTTC
AGCAGAATTCTACCTGCCGAACCAACAAGACCCTGGTTCTTGGCGGATAC
CCGTTGATATTTTTTTGACAGCTTTCAGAAGCGATCATACCGGCGAAAGA
CACTAGATCATGATCAACACAGAGGAATATCCGAGAATCGGATCTCTTCC
TTCGCCTGTTGTAGATCGGATAGCAGTAGCCCATACTAGCTGCACAGCAC
GCACAGCAAGCGTCCGGTGCAATTGGTTCCCTAATAATAGTCTCGGTCGA
GGGCCAAAGTGTTAAAAATTTATGAT
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Coding sequence (CDS) from alignment at ch7:3284550..3285825+

>KJC3_010420-T1 ID=KJC3_010420-T1|Name=KJC3_010420-T1|organism=Aspergillus niger KJC3|type=CDS|length=2100bp|location=Sequence derived from alignment at ch7:3284550..3285825+ (Aspergillus niger KJC3)
ATGGCAGCTAAAGTGCCCAGAAACTTCAGACTGCTCGAAGAGCTGGAGAA
GGGTGAGAAGGGTCTGGGAGCTGAGTCATGCTCCTATGGTCTTGCAGATG
GTGAAGACATGATGATGAGTAACTGGAACGGAACTATTCTTGGCCCCCCT
CACAGTGTCCATGAGAACAGAATTTACAGCGTCAACATCCATTGCGGTCC
GGACTATCCCGACAACCCCCCTACCATCCAATTCGTATCCCGAGTCAACT
TGCCATGCGTTGATGGCCGGAGCGGAAAGGTCGATCCTACCAAGCTGCCC
TGCTTGGCTCAGTGGAAGCGCGACTATACCATGGAAACTATTCTAGTCGA
GCTCAGAAGATATATGGCTCTGCCTCAGCACAAGAAGCTTCCCCAGCCTC
CGGAAGGCTCGAACTTCTAAATGGCAGCTAAAGTGCCCAGAAACTTCAGA
CTGCTCGAAGAGCTGGAGAAGGGTGAGAAGGGTCTGGGAGCTGAGTCATG
CTCCTATGGTCTTGCAGATGGTGAAGACATGATGATGAGTAACTGGAACG
GAACTATTCTTGGCCCCCCTCACAGTGTCCATGAGAACAGAATTTACAGC
GTCAACATCCATTGCGGTCCGGACTATCCCGACAACCCCCCTACCATCCA
ATTCGTATCCCGAGTCAACTTGCCATGCGTTGATGGCCGGAGCGGAAAGG
TCGATCCTACCAAGCTGCCCTGCTTGGCTCAGTGGAAGCGCGACTATACC
ATGGAAACTATTCTAGTCGAGCTCAGAAGATATATGGCTCTGCCTCAGCA
CAAGAAGCTTCCCCAGCCTCCGGAAGGCTCGAACTTCTAAATGGCAGCTA
AAGTGCCCAGAAACTTCAGACTGCTCGAAGAGCTGGAGAAGGGTGAGAAG
GGTCTGGGAGCTGAGTCATGCTCCTATGGTCTTGCAGATGGTGAAGACAT
GATGATGAGTAACTGGAACGGAACTATTCTTGGCCCCCCTCACAGTGTCC
ATGAGAACAGAATTTACAGCGTCAACATCCATTGCGGTCCGGACTATCCC
GACAACCCCCCTACCATCCAATTCGTATCCCGAGTCAACTTGCCATGCGT
TGATGGCCGGAGCGGAAAGGTCGATCCTACCAAGCTGCCCTGCTTGGCTC
AGTGGAAGCGCGACTATACCATGGAAACTATTCTAGTCGAGCTCAGAAGA
TATATGGCTCTGCCTCAGCACAAGAAGCTTCCCCAGCCTCCGGAAGGCTC
GAACTTCTAAATGGCAGCTAAAGTGCCCAGAAACTTCAGACTGCTCGAAG
AGCTGGAGAAGGGTGAGAAGGGTCTGGGAGCTGAGTCATGCTCCTATGGT
CTTGCAGATGGTGAAGACATGATGATGAGTAACTGGAACGGAACTATTCT
TGGCCCCCCTCACAGTGTCCATGAGAACAGAATTTACAGCGTCAACATCC
ATTGCGGTCCGGACTATCCCGACAACCCCCCTACCATCCAATTCGTATCC
CGAGTCAACTTGCCATGCGTTGATGGCCGGAGCGGAAAGGTCGATCCTAC
CAAGCTGCCCTGCTTGGCTCAGTGGAAGCGCGACTATACCATGGAAACTA
TTCTAGTCGAGCTCAGAAGATATATGGCTCTGCCTCAGCACAAGAAGCTT
CCCCAGCCTCCGGAAGGCTCGAACTTCTAAATGGCAGCTAAAGTGCCCAG
AAACTTCAGACTGCTCGAAGAGCTGGAGAAGGGTGAGAAGGGTCTGGGAG
CTGAGTCATGCTCCTATGGTCTTGCAGATGGTGAAGACATGATGATGAGT
AACTGGAACGGAACTATTCTTGGCCCCCCTCACAGTGTCCATGAGAACAG
AATTTACAGCGTCAACATCCATTGCGGTCCGGACTATCCCGACAACCCCC
CTACCATCCAATTCGTATCCCGAGTCAACTTGCCATGCGTTGATGGCCGG
AGCGGAAAGGTCGATCCTACCAAGCTGCCCTGCTTGGCTCAGTGGAAGCG
CGACTATACCATGGAAACTATTCTAGTCGAGCTCAGAAGATATATGGCTC
TGCCTCAGCACAAGAAGCTTCCCCAGCCTCCGGAAGGCTCGAACTTCTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MMS2KJC3_010420Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010420-T1KJC3_010420-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010420-T1.utr5p1KJC3_010420-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010420-T1.exon1KJC3_010420-T1.exon1Aspergillus niger KJC3exon
KJC3_010420-T1.exon2KJC3_010420-T1.exon2Aspergillus niger KJC3exon
KJC3_010420-T1.exon3KJC3_010420-T1.exon3Aspergillus niger KJC3exon
KJC3_010420-T1.exon4KJC3_010420-T1.exon4Aspergillus niger KJC3exon
KJC3_010420-T1.exon5KJC3_010420-T1.exon5Aspergillus niger KJC3exon
KJC3_010420-T1.exon6KJC3_010420-T1.exon6Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010420-T1.cdsKJC3_010420-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010420-T1.utr3p1KJC3_010420-T1.utr3p1Aspergillus niger KJC3three_prime_UTR
KJC3_010420-T1.utr3p2KJC3_010420-T1.utr3p2Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264UD3
DBxrefInterPro:IPR000608
DBxrefInterPro:IPR016135
DBxrefPFAM:PF00179
ProductE2 ubiquitin-conjugating protein mms2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3284550..3285825 +
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