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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3285944..3287025+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010421-T1 ID=KJC3_010421-T1|Name=KJC3_010421-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1082bp|location=Sequence derived from alignment at ch7:3285944..3287025+ (Aspergillus niger KJC3)
CTTAAGCCTTCAGGATCATGCTGCCTCTTCGATAATGCATAGAATAGTTG
TGCCCAAGCAGTCTTCCGCTCATCGTTTCGCAAGTAAGTTTGATAAGACA
CATTCCTGAATATTGGACGTCGCAAGAATACGACTAAAGACCATCTACCT
GGCAGCTTTGGCACTCTATCGAGCGCTTCTCCGACAATGCGCCAAACTAC
CACAGTGTCCCTCCGAACTCGCTGCGTGCAAGCCATACATCCAGAATAGA
TTCAACAGATACAAAACGCTTCAGAGTCCATCTCAAACAGCCAATTCCCT
GAAGGCAGGCTACGAGGTGCGTTGAAAATCGACTCGATATCGACCGTTCA
GGATCTAAATTCGGCGGTTTCGCAAACACTCAGGCTCTTGACCTATTGTA
CTCAGCGTCGCAAGGCGACCAGAATGGTGTTCAACGGATAAGGAAGCTCA
TATCGGAGAGCGAATCGTCAAAGCGACAAAAATCCGAATGGCACAAGGAA
CGAGCTAAGGTTATTCCGGTAAAGCCCGTGAGCCGGAAGGAGCTGAAGAA
AGAGGCAAACAAACGGTACCGAGTATTGACTGCGAAACGGCATCCGGATG
CTACCTCTATTCTTGCACGTCCTCGGCCTGTGGTCAATGGGAAGCGTCGA
GTTCCTGTACTCGTGAATGCGCGTGGTTTCCCATTTCTACTCATCAAGAA
GCCCCAGCCCAAGTTCCTTAGCGCCGTATTGGACTCGAAACTCAAAAGAC
GCTGGAAGAGGATGGAGCGCCTAAAAAGGCTCGAGTCTGAACTGCCGATG
GCCAGGGATGAGGATGAATGGGACTTATTAACTGGTCATAAAGAAGAAGC
AAGGTGGTCTGGGCCTGTTAGAGCATCACTCAAAGAGGTACAAGGACAAA
TATCAGAAGGCGATCGGAAGACCAAGGAACTGGCACAAGCTATGTGGAAA
GTCGTCCTTGAGGAGCGCAAATTGGCGGAACAAGAGGAAAAGCAACGGGT
TGAACAAGCCAAGCAATCAGCGGAAGAGAAAGAGAATCTACCAACAGGGG
AGCAGGATAAGAAACAGTCGAGTGACGGATGA back to topCoding sequence (CDS) from alignment at ch7:3285944..3287025+ >KJC3_010421-T1 ID=KJC3_010421-T1|Name=KJC3_010421-T1|organism=Aspergillus niger KJC3|type=CDS|length=2727bp|location=Sequence derived from alignment at ch7:3285944..3287025+ (Aspergillus niger KJC3)
ATGCATAGAATAGTTGTGCCCAAGCAGTCTTCCGCTCATCGTTTCGCAAC
TTTGGCACTCTATCGAGCGCTTCTCCGACAATGCGCCAAACTACCACAGT
GTCCCTCCGAACTCGCTGCGTGCAAGCCATACATCCAGAATAGATTCAAC
AGATACAAAACGCTTCAGAGTCCATCTCAAACAGCCAATTCCCTGAAGGC
AGGCTACGAGGCTCTTGACCTATTGTACTCAGCGTCGCAAGGCGACCAGA
ATGGTGTTCAACGGATAAGGAAGCTCATATCGGAGAGCGAATCGTCAAAG
CGACAAAAATCCGAATGGCACAAGGAACGAGCTAAGGTTATTCCGGTAAA
GCCCGTGAGCCGGAAGGAGCTGAAGAAAGAGGCAAACAAACGGTACCGAG
TATTGACTGCGAAACGGCATCCGGATGCTACCTCTATTCTTGCACGTCCT
CGGCCTGTGGTCAATGGGAAGCGTCGAGTTCCTGTACTCGTGAATGCGCG
TGGTTTCCCATTTCTACTCATCAAGAAGCCCCAGCCCAAGTTCCTTAGCG
CCGTATTGGACTCGAAACTCAAAAGACGCTGGAAGAGGATGGAGCGCCTA
AAAAGGCTCGAGTCTGAACTGCCGATGGCCAGGGATGAGGATGAATGGGA
CTTATTAACTGGTCATAAAGAAGAAGCAAGGTGGTCTGGGCCTGTTAGAG
CATCACTCAAAGAGGTACAAGGACAAATATCAGAAGGCGATCGGAAGACC
AAGGAACTGGCACAAGCTATGTGGAAAGTCGTCCTTGAGGAGCGCAAATT
GGCGGAACAAGAGGAAAAGCAACGGGTTGAACAAGCCAAGCAATCAGCGG
AAGAGAAAGAGAATCTACCAACAGGGGAGCAGGATAAGAAACAGTCGAGT
GACGGATGAATGCATAGAATAGTTGTGCCCAAGCAGTCTTCCGCTCATCG
TTTCGCAACTTTGGCACTCTATCGAGCGCTTCTCCGACAATGCGCCAAAC
TACCACAGTGTCCCTCCGAACTCGCTGCGTGCAAGCCATACATCCAGAAT
AGATTCAACAGATACAAAACGCTTCAGAGTCCATCTCAAACAGCCAATTC
CCTGAAGGCAGGCTACGAGGCTCTTGACCTATTGTACTCAGCGTCGCAAG
GCGACCAGAATGGTGTTCAACGGATAAGGAAGCTCATATCGGAGAGCGAA
TCGTCAAAGCGACAAAAATCCGAATGGCACAAGGAACGAGCTAAGGTTAT
TCCGGTAAAGCCCGTGAGCCGGAAGGAGCTGAAGAAAGAGGCAAACAAAC
GGTACCGAGTATTGACTGCGAAACGGCATCCGGATGCTACCTCTATTCTT
GCACGTCCTCGGCCTGTGGTCAATGGGAAGCGTCGAGTTCCTGTACTCGT
GAATGCGCGTGGTTTCCCATTTCTACTCATCAAGAAGCCCCAGCCCAAGT
TCCTTAGCGCCGTATTGGACTCGAAACTCAAAAGACGCTGGAAGAGGATG
GAGCGCCTAAAAAGGCTCGAGTCTGAACTGCCGATGGCCAGGGATGAGGA
TGAATGGGACTTATTAACTGGTCATAAAGAAGAAGCAAGGTGGTCTGGGC
CTGTTAGAGCATCACTCAAAGAGGTACAAGGACAAATATCAGAAGGCGAT
CGGAAGACCAAGGAACTGGCACAAGCTATGTGGAAAGTCGTCCTTGAGGA
GCGCAAATTGGCGGAACAAGAGGAAAAGCAACGGGTTGAACAAGCCAAGC
AATCAGCGGAAGAGAAAGAGAATCTACCAACAGGGGAGCAGGATAAGAAA
CAGTCGAGTGACGGATGAATGCATAGAATAGTTGTGCCCAAGCAGTCTTC
CGCTCATCGTTTCGCAACTTTGGCACTCTATCGAGCGCTTCTCCGACAAT
GCGCCAAACTACCACAGTGTCCCTCCGAACTCGCTGCGTGCAAGCCATAC
ATCCAGAATAGATTCAACAGATACAAAACGCTTCAGAGTCCATCTCAAAC
AGCCAATTCCCTGAAGGCAGGCTACGAGGCTCTTGACCTATTGTACTCAG
CGTCGCAAGGCGACCAGAATGGTGTTCAACGGATAAGGAAGCTCATATCG
GAGAGCGAATCGTCAAAGCGACAAAAATCCGAATGGCACAAGGAACGAGC
TAAGGTTATTCCGGTAAAGCCCGTGAGCCGGAAGGAGCTGAAGAAAGAGG
CAAACAAACGGTACCGAGTATTGACTGCGAAACGGCATCCGGATGCTACC
TCTATTCTTGCACGTCCTCGGCCTGTGGTCAATGGGAAGCGTCGAGTTCC
TGTACTCGTGAATGCGCGTGGTTTCCCATTTCTACTCATCAAGAAGCCCC
AGCCCAAGTTCCTTAGCGCCGTATTGGACTCGAAACTCAAAAGACGCTGG
AAGAGGATGGAGCGCCTAAAAAGGCTCGAGTCTGAACTGCCGATGGCCAG
GGATGAGGATGAATGGGACTTATTAACTGGTCATAAAGAAGAAGCAAGGT
GGTCTGGGCCTGTTAGAGCATCACTCAAAGAGGTACAAGGACAAATATCA
GAAGGCGATCGGAAGACCAAGGAACTGGCACAAGCTATGTGGAAAGTCGT
CCTTGAGGAGCGCAAATTGGCGGAACAAGAGGAAAAGCAACGGGTTGAAC
AAGCCAAGCAATCAGCGGAAGAGAAAGAGAATCTACCAACAGGGGAGCAG
GATAAGAAACAGTCGAGTGACGGATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010421-T1.utr5p1 | KJC3_010421-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008011 |
| DBxref | PFAM:PF05347 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3285944..3287025 + |
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