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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3288605..3290225+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010423-T1 ID=KJC3_010423-T1|Name=KJC3_010423-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1621bp|location=Sequence derived from alignment at ch7:3288605..3290225+ (Aspergillus niger KJC3)
AAATGAATTCCTCGGTCTTTAGGTGTGTAAGTAGAATACGCTGCGATCCC
ACATGCAAACAAGGCAAACAGATAAGGAATCGCCCAAATTTGTCCCGCCC
GAAAAAGGGAATTTCTATGCTCCGCCTTCTCGAAATTCAAAGCTTCAAGC
ATTTACACTCAATATTTTTGTTGATAAAACCATTCTACCCTTTACTCCGT
GTCCTCGAAAAACTCTTTCAAGTACGTTTGACTTATAATTCCGCTACAGC
TTATAGATCATGGGAAAATCAAGACCTCACAACAAGAAGGCCTCCAAATC
TCGCTCGAAGTCCGTTTTGGGCGCTGGCGGCTCGGTTTCGAAACAGAAAA
TGAACGAAGACCCCTCTAAGCTCCTCGAGCAGGCCACGATACAGCTCCAG
ACCGGTCAACCGGATGTGGCACTTTCGTTAGCTCAGCAAGCCCTGAACAA
TGCGCCGGATAATTCTCCATCTCAATTAGTGGCACTTAATACCGTTGGGG
AGATCTACGTTGAACTGGGCGAGATCGATGTTGCGAAACAACACTTTATG
CGTGCCATCGAGCTCGACCCGAATGGCACAATCCCTGAGGCTCAAGGAGG
CGGTGCTGAGAAGTTCCTATGGTTAGCTCAATTGAGCGAACAGGGTGGGA
AGGACAGCGTTCAATGGTTCGAGAAGGGAGTGTCGTCGCTCAGGCATATT
ATCCAGCAGCTCGAGCAGAAACCTGGCCCTGAGGAAGCGCTTGAGCTGGC
CGAGAAGAAGCGCAAGATGGCGAATGCCCTATGCGGTGTTGCTGAGATCT
ATATGACCGATCTCTCGTGAGTCGCTCTCCCTCCCTTTGCAAGGTTGGCT
TGCAGATCTTTTGGTGCTGACTGTCAGTAGGTGGGAAGAAGATGCGGAAA
ATCGTTGCGAATCACTCATCACAGAAGCCCTCCTTGTCGCTCCGAATGCG
CCCGAAGTACTACAGACCCTCGCATCGATCCGTATCTCGCAGCTACGGAC
AGAAGAGGCTCAAGCAGCGCTCAGGAGGAGTCTCGACCTTTGGAAAGACC
TACCGCCTGAGGACTTGTCCATTCCTGATTTTGCGACAAGAATTAGTCTT
TCCCGTCTCCTGATGGAGGTCGGCATGGAGCTTGAGGCTTTAGAGGTGCT
GGAACGCCTAATCTTGGAGGACGACCAAAGTGTGGAGGCATGGTATCTTG
GAGGATGGTGTCTGCAGCTCCTAGCCGGGAAGCAACAAGCACCCAAGGAT
GCCGATGAAGAGGACGGCAACACCCCAGAGGCCAGGCGCCATGCATCACT
CGTGGCTAGCCGCGAATGGCTCAAACAAAGCTTAACGCTGTACGATCTCG
TTCAGTATGAGGATGAGAGACTCAAGGAACACGCACTGGAGTTGGTCCAA
GAGATGAACAAGGAGATCGGAGAAGATATGGATGATGATGAGGCCGGGGA
GGGTGAGGAAGATTGGGAGGACGAGGAGATCGAGGTGGAATCTGATGGCG
ATGACGAGATGGCTGACTCCTAAAAAGTTGGATGTTTTGATGGTTACGAA
AGTTCTTTGTCATGATACCAGTATATAAAAGGGCATGTTTTCCAATCCAG
CCTACGGCTATTCATTCAAAG back to topCoding sequence (CDS) from alignment at ch7:3288605..3290225+ >KJC3_010423-T1 ID=KJC3_010423-T1|Name=KJC3_010423-T1|organism=Aspergillus niger KJC3|type=CDS|length=2400bp|location=Sequence derived from alignment at ch7:3288605..3290225+ (Aspergillus niger KJC3)
ATGGGAAAATCAAGACCTCACAACAAGAAGGCCTCCAAATCTCGCTCGAA
GTCCGTTTTGGGCGCTGGCGGCTCGGTTTCGAAACAGAAAATGAACGAAG
ACCCCTCTAAGCTCCTCGAGCAGGCCACGATACAGCTCCAGACCGGTCAA
CCGGATGTGGCACTTTCGTTAGCTCAGCAAGCCCTGAACAATGCGCCGGA
TAATTCTCCATCTCAATTAGTGGCACTTAATACCGTTGGGGAGATCTACG
TTGAACTGGGCGAGATCGATGTTGCGAAACAACACTTTATGCGTGCCATC
GAGCTCGACCCGAATGGCACAATCCCTGAGGCTCAAGGAGGCGGTGCTGA
GAAGTTCCTATGGTTAGCTCAATTGAGCGAACAGGGTGGGAAGGACAGCG
TTCAATGGTTCGAGAAGGGAGTGTCGTCGCTCAGGCATATTATCCAGCAG
CTCGAGCAGAAACCTGGCCCTGAGGAAGCGCTTGAGCTGGCCGAGAAGAA
GCGCAAGATGGCGAATGCCCTATGCGGTGTTGCTGAGATCTATATGACCG
ATCTCTCGTGGGAAGAAGATGCGGAAAATCGTTGCGAATCACTCATCACA
GAAGCCCTCCTTGTCGCTCCGAATGCGCCCGAAGTACTACAGACCCTCGC
ATCGATCCGTATCTCGCAGCTACGGACAGAAGAGGCTCAAGCAGCGCTCA
GGAGGAGTCTCGACCTTTGGAAAGACCTACCGCCTGAGGACTTGTCCATT
CCTGATTTTGCGACAAGAATTAGTCTTTCCCGTCTCCTGATGGAGGTCGG
CATGGAGCTTGAGGCTTTAGAGGTGCTGGAACGCCTAATCTTGGAGGACG
ACCAAAGTGTGGAGGCATGGTATCTTGGAGGATGGTGTCTGCAGCTCCTA
GCCGGGAAGCAACAAGCACCCAAGGATGCCGATGAAGAGGACGGCAACAC
CCCAGAGGCCAGGCGCCATGCATCACTCGTGGCTAGCCGCGAATGGCTCA
AACAAAGCTTAACGCTGTACGATCTCGTTCAGTATGAGGATGAGAGACTC
AAGGAACACGCACTGGAGTTGGTCCAAGAGATGAACAAGGAGATCGGAGA
AGATATGGATGATGATGAGGCCGGGGAGGGTGAGGAAGATTGGGAGGACG
AGGAGATCGAGGTGGAATCTGATGGCGATGACGAGATGGCTGACTCCTAA
ATGGGAAAATCAAGACCTCACAACAAGAAGGCCTCCAAATCTCGCTCGAA
GTCCGTTTTGGGCGCTGGCGGCTCGGTTTCGAAACAGAAAATGAACGAAG
ACCCCTCTAAGCTCCTCGAGCAGGCCACGATACAGCTCCAGACCGGTCAA
CCGGATGTGGCACTTTCGTTAGCTCAGCAAGCCCTGAACAATGCGCCGGA
TAATTCTCCATCTCAATTAGTGGCACTTAATACCGTTGGGGAGATCTACG
TTGAACTGGGCGAGATCGATGTTGCGAAACAACACTTTATGCGTGCCATC
GAGCTCGACCCGAATGGCACAATCCCTGAGGCTCAAGGAGGCGGTGCTGA
GAAGTTCCTATGGTTAGCTCAATTGAGCGAACAGGGTGGGAAGGACAGCG
TTCAATGGTTCGAGAAGGGAGTGTCGTCGCTCAGGCATATTATCCAGCAG
CTCGAGCAGAAACCTGGCCCTGAGGAAGCGCTTGAGCTGGCCGAGAAGAA
GCGCAAGATGGCGAATGCCCTATGCGGTGTTGCTGAGATCTATATGACCG
ATCTCTCGTGGGAAGAAGATGCGGAAAATCGTTGCGAATCACTCATCACA
GAAGCCCTCCTTGTCGCTCCGAATGCGCCCGAAGTACTACAGACCCTCGC
ATCGATCCGTATCTCGCAGCTACGGACAGAAGAGGCTCAAGCAGCGCTCA
GGAGGAGTCTCGACCTTTGGAAAGACCTACCGCCTGAGGACTTGTCCATT
CCTGATTTTGCGACAAGAATTAGTCTTTCCCGTCTCCTGATGGAGGTCGG
CATGGAGCTTGAGGCTTTAGAGGTGCTGGAACGCCTAATCTTGGAGGACG
ACCAAAGTGTGGAGGCATGGTATCTTGGAGGATGGTGTCTGCAGCTCCTA
GCCGGGAAGCAACAAGCACCCAAGGATGCCGATGAAGAGGACGGCAACAC
CCCAGAGGCCAGGCGCCATGCATCACTCGTGGCTAGCCGCGAATGGCTCA
AACAAAGCTTAACGCTGTACGATCTCGTTCAGTATGAGGATGAGAGACTC
AAGGAACACGCACTGGAGTTGGTCCAAGAGATGAACAAGGAGATCGGAGA
AGATATGGATGATGATGAGGCCGGGGAGGGTGAGGAAGATTGGGAGGACG
AGGAGATCGAGGTGGAATCTGATGGCGATGACGAGATGGCTGACTCCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010423-T1.utr5p1 | KJC3_010423-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010423-T1.utr3p1 | KJC3_010423-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013026 |
| DBxref | InterPro:IPR011990 |
| DBxref | InterPro:IPR019734 |
| DBxref | PFAM:PF13181 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3288605..3290225 + |
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