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KJC3_010430-T1, KJC3_010430-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010430-T1
Unique NameKJC3_010430-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3305314..3307068-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010430-T1 ID=KJC3_010430-T1|Name=KJC3_010430-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1755bp|location=Sequence derived from alignment at ch7:3305314..3307068- (Aspergillus niger KJC3)
GACGCCTAGCCAACTGGCGAGTACCAGCATTATGTCATCTCGATTGTGAT
CTTCTATCGCCGAGCTCCAGCCAATCACCGAACGCGCCTCACGGTCTCTG
CGGGCATCGATCGAACATCGCGCGCAAGAGCTCTCTCGAATCTCCCCGCA
ATCCGGCAGCGCCATTTCGCAATTGGTCCTAGAAATTACTTTCGTTACTG
AAGACTTCTTCGCCACTCTTTTTGCAAGGAACTCTCTCCCCACTTTACCA
TCCACAGCCCCGCGGGGCATCAGTTCAGGCTGCTGCTGCCGCAATCGCGA
ACCCGCCAGCAGCAGGAACAATTACACAAGTACTACCTTGACAATGGCGC
CTCCTCGACGGAACCTCCTCCCGAAAGACCGGTTTGGTCTTGCATTTGGT
GGTCTAAAAACACAAAACTACCATGATCCCGCTGCTCGCGGGCCTGGTTC
CCATACGTATATGCCCATCCGACATATTACTATCACAGCAGAGAAGCAAA
ACGCATACTGATGATGGAGGACGACGGAAAATCTAGAATTCGCACAATAG
CCTGGAACCCTACCGGCCAACTCATTGCCACCGGCTCCGCAGACCGTACC
CTTCGAATCTGGAACCCTGAGCGTTCGCAAGTGAAATACTCCACCGAACT
GCGCGGCCATACTGCTGGAATTGAGAAAGTCGTGTTCAACCCCGTTCGAG
ACTCCGAACTGGCTAGCTGCTCTACGGATGGAACCGTTCGCGTTTGGGAT
GTCCGGTCAAAGACCTGCGTCAGTCGTCTAGACGTCGGAGGCGAGGCATT
CACCTTGTCCTGGTCTGCTGATGGAAGGGTAATGATCGTTGGCAGGAAGG
TGAGCAAAACACACACGAGCACGAAACCAATGCGCTCAGCATCAGGGACT
TGTCAATTGACCAAACGCCCAATATCTCTAGGACGACACCCTCATACCCA
TCTCCGTCGAATCCCCCTCCACCCCGACCATCCACCCAGACGGACCACTC
AACGCTGCAGCGACGCAACAACAACAGAAGCCCACCTTCACACCATCAAC
CTACACAGCCCTAGAACCACACCCTCAACCCATCCAAACAAACGCAACGA
CCTTCTCACATCACATGTCCACCCCTTCCTCCCCAGACCTCCACCTCTTC
GCCACGACCGGCGAAGGCACCGTCAAAATCATCTCTTACCCGTCCTTTGA
CGTCCTCCACACCCTTCACGCCCACACTTCTGCTTGCCTTTCCATCTCCC
TAGCACCCACAGGTCGCTACCTCGCCGTCGGGGGCAGCGACGCCCTCATC
TCCCTATGGGATACAACAGACTGGATCTGCAAGCGTACCGTTTCGAGCAA
TAACGGTGGAGCCGTGCGTGGCGTGAGCTGGAGCTTCGACGGTAGATTCA
TCTGCGGCGCTTGTGATGAGGTAGGCTGTGGTGGTAATGGGTTGGAGATC
TTCCATGCGGAAACGGGTGAGAGTGTTCATACCGTTCCTACGGGAGGAAA
TGCCAATTCGGGGATTCCGGCTGTCGCGTGGCATCCTTCGAGGTATTGGC
TTGCATATTCTACTACTGCGGATGGATCGGGGCCAGGCGGTTTGAGAATT
GTAGGGGCTGCGGGTGGAAGTTTGTAGAAACGGCGGTATCCATGGTTCGA
AAAGGTGATATTACTTTGCATCTTTGTGTATGTGTGTCTTGTGGCGTTTG
GTGCGTTGGATGTTTATTTGAGCTTATGATGTCTACGGTAGATATTAAGC
ATTGT
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Coding sequence (CDS) from alignment at ch7:3305314..3307068-

>KJC3_010430-T1 ID=KJC3_010430-T1|Name=KJC3_010430-T1|organism=Aspergillus niger KJC3|type=CDS|length=3366bp|location=Sequence derived from alignment at ch7:3305314..3307068- (Aspergillus niger KJC3)
GACGACACCCTCATACCCATCTCCGTCGAATCCCCCTCCACCCCGACCAT
CCACCCAGACGGACCACTCAACGCTGCAGCGACGCAACAACAACAGAAGC
CCACCTTCACACCATCAACCTACACAGCCCTAGAACCACACCCTCAACCC
ATCCAAACAAACGCAACGACCTTCTCACATCACATGTCCACCCCTTCCTC
CCCAGACCTCCACCTCTTCGCCACGACCGGCGAAGGCACCGTCAAAATCA
TCTCTTACCCGTCCTTTGACGTCCTCCACACCCTTCACGCCCACACTTCT
GCTTGCCTTTCCATCTCCCTAGCACCCACAGGTCGCTACCTCGCCGTCGG
GGGCAGCGACGCCCTCATCTCCCTATGGGATACAACAGACTGGATCTGCA
AGCGTACCGTTTCGAGCAATAACGGTGGAGCCGTGCGTGGCGTGAGCTGG
AGCTTCGACGGTAGATTCATCTGCGGCGCTTGTGATGAGGTAGGCTGTGG
TGGTAATGGGTTGGAGATCTTCCATGCGGAAACGGGTGAGAGTGTTCATA
CCGTTCCTACGGGAGGAAATGCCAATTCGGGGATTCCGGCTGTCGCGTGG
CATCCTTCGAGGTATTGGCTTGCATATTCTACTACTGCGGATGGATCGGG
GCCAGGCGGTTTGAGAATTGTAGGGGCTGCGGGTGGAAGTTTGTAGAATT
CGCACAATAGCCTGGAACCCTACCGGCCAACTCATTGCCACCGGCTCCGC
AGACCGTACCCTTCGAATCTGGAACCCTGAGCGTTCGCAAGTGAAATACT
CCACCGAACTGCGCGGCCATACTGCTGGAATTGAGAAAGTCGTGTTCAAC
CCCGTTCGAGACTCCGAACTGGCTAGCTGCTCTACGGATGGAACCGTTCG
CGTTTGGGATGTCCGGTCAAAGACCTGCGTCAGTCGTCTAGACGTCGGAG
GCGAGGCATTCACCTTGTCCTGGTCTGCTGATGGAAGGGTAATGATCGTT
GGCAGGAAGATGGCGCCTCCTCGACGGAACCTCCTCCCGAAAGACCGGTT
TGGTCTTGCATTTGGTGGTCTAAAAACACAAAACTACCATGATCCCGCTG
CTCGCGGGCCTGGTTCCCATACGACGACACCCTCATACCCATCTCCGTCG
AATCCCCCTCCACCCCGACCATCCACCCAGACGGACCACTCAACGCTGCA
GCGACGCAACAACAACAGAAGCCCACCTTCACACCATCAACCTACACAGC
CCTAGAACCACACCCTCAACCCATCCAAACAAACGCAACGACCTTCTCAC
ATCACATGTCCACCCCTTCCTCCCCAGACCTCCACCTCTTCGCCACGACC
GGCGAAGGCACCGTCAAAATCATCTCTTACCCGTCCTTTGACGTCCTCCA
CACCCTTCACGCCCACACTTCTGCTTGCCTTTCCATCTCCCTAGCACCCA
CAGGTCGCTACCTCGCCGTCGGGGGCAGCGACGCCCTCATCTCCCTATGG
GATACAACAGACTGGATCTGCAAGCGTACCGTTTCGAGCAATAACGGTGG
AGCCGTGCGTGGCGTGAGCTGGAGCTTCGACGGTAGATTCATCTGCGGCG
CTTGTGATGAGGTAGGCTGTGGTGGTAATGGGTTGGAGATCTTCCATGCG
GAAACGGGTGAGAGTGTTCATACCGTTCCTACGGGAGGAAATGCCAATTC
GGGGATTCCGGCTGTCGCGTGGCATCCTTCGAGGTATTGGCTTGCATATT
CTACTACTGCGGATGGATCGGGGCCAGGCGGTTTGAGAATTGTAGGGGCT
GCGGGTGGAAGTTTGTAGAATTCGCACAATAGCCTGGAACCCTACCGGCC
AACTCATTGCCACCGGCTCCGCAGACCGTACCCTTCGAATCTGGAACCCT
GAGCGTTCGCAAGTGAAATACTCCACCGAACTGCGCGGCCATACTGCTGG
AATTGAGAAAGTCGTGTTCAACCCCGTTCGAGACTCCGAACTGGCTAGCT
GCTCTACGGATGGAACCGTTCGCGTTTGGGATGTCCGGTCAAAGACCTGC
GTCAGTCGTCTAGACGTCGGAGGCGAGGCATTCACCTTGTCCTGGTCTGC
TGATGGAAGGGTAATGATCGTTGGCAGGAAGATGGCGCCTCCTCGACGGA
ACCTCCTCCCGAAAGACCGGTTTGGTCTTGCATTTGGTGGTCTAAAAACA
CAAAACTACCATGATCCCGCTGCTCGCGGGCCTGGTTCCCATACGACGAC
ACCCTCATACCCATCTCCGTCGAATCCCCCTCCACCCCGACCATCCACCC
AGACGGACCACTCAACGCTGCAGCGACGCAACAACAACAGAAGCCCACCT
TCACACCATCAACCTACACAGCCCTAGAACCACACCCTCAACCCATCCAA
ACAAACGCAACGACCTTCTCACATCACATGTCCACCCCTTCCTCCCCAGA
CCTCCACCTCTTCGCCACGACCGGCGAAGGCACCGTCAAAATCATCTCTT
ACCCGTCCTTTGACGTCCTCCACACCCTTCACGCCCACACTTCTGCTTGC
CTTTCCATCTCCCTAGCACCCACAGGTCGCTACCTCGCCGTCGGGGGCAG
CGACGCCCTCATCTCCCTATGGGATACAACAGACTGGATCTGCAAGCGTA
CCGTTTCGAGCAATAACGGTGGAGCCGTGCGTGGCGTGAGCTGGAGCTTC
GACGGTAGATTCATCTGCGGCGCTTGTGATGAGGTAGGCTGTGGTGGTAA
TGGGTTGGAGATCTTCCATGCGGAAACGGGTGAGAGTGTTCATACCGTTC
CTACGGGAGGAAATGCCAATTCGGGGATTCCGGCTGTCGCGTGGCATCCT
TCGAGGTATTGGCTTGCATATTCTACTACTGCGGATGGATCGGGGCCAGG
CGGTTTGAGAATTGTAGGGGCTGCGGGTGGAAGTTTGTAGAATTCGCACA
ATAGCCTGGAACCCTACCGGCCAACTCATTGCCACCGGCTCCGCAGACCG
TACCCTTCGAATCTGGAACCCTGAGCGTTCGCAAGTGAAATACTCCACCG
AACTGCGCGGCCATACTGCTGGAATTGAGAAAGTCGTGTTCAACCCCGTT
CGAGACTCCGAACTGGCTAGCTGCTCTACGGATGGAACCGTTCGCGTTTG
GGATGTCCGGTCAAAGACCTGCGTCAGTCGTCTAGACGTCGGAGGCGAGG
CATTCACCTTGTCCTGGTCTGCTGATGGAAGGGTAATGATCGTTGGCAGG
AAGATGGCGCCTCCTCGACGGAACCTCCTCCCGAAAGACCGGTTTGGTCT
TGCATTTGGTGGTCTAAAAACACAAAACTACCATGATCCCGCTGCTCGCG
GGCCTGGTTCCCATAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010430KJC3_010430Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010430-T1KJC3_010430-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010430-T1.cdsKJC3_010430-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010430-T1.utr3p1KJC3_010430-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010430-T1.exon3KJC3_010430-T1.exon3Aspergillus niger KJC3exon
KJC3_010430-T1.exon2KJC3_010430-T1.exon2Aspergillus niger KJC3exon
KJC3_010430-T1.exon1KJC3_010430-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010430-T1.utr5p1KJC3_010430-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR024977
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
DBxrefPFAM:PF12894
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3305314..3307068 -
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