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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3324099..3327845+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010437-T2 ID=KJC3_010437-T2|Name=KJC3_010437-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3747bp|location=Sequence derived from alignment at ch7:3324099..3327845+ (Aspergillus niger KJC3)
CTAGTATCCATGAGCTCATGGAAACTAATCGTTATTAACTACTCACTAAT
TACTGTCTCCGATGCGCGCTAACTCGCTAACCCTGTAAGAATAACGCTTT
ATCGCCCTCAAGCAAGGAAAACGGATCTAGTTGGGCAGATCCGATCTCTC
TAGTTGATTCCATACCTGGCCCACTGCCCAGCCACCCATTTGAATCTCAT
TGGCTCTATTCGATTATATTAGACACTTACTTCATAGCTCTGCGACTGAG
AGCCAACTCATCATCCTACCCCTTCCTGATATCCCCCCTTGGTATGATCT
CGCAGGTGCAACTTCCATGGCCAGTATGATGCATAGGCCTCAATTTCACA
AGGCCAGGGACAGCCAGCGCAAGGTCTCGCCTCCCGGTCCAACTTACATG
TCCAACGATCAGATCGGTACGTGTTTACGCTGCTGCGATATTGAGTCAGA
GCATTGTTTGCGTTTTCTAAGGATGTTGGCCGAGCGACCGGCTGTGGGTT
GACATTGCGATATTAATTAATTCCTGGCGTAACAGCGACCTATCTGAAAG
ATCTGCGGACGAATCGTCCTGCCCGTCCCAGCGGATCCAGGCCGCTTCCT
TCGAGATCAACTGGATCGTCCTCTGACACTCGGGAGGATCCCCCTCCACG
GGCAGCATCTGCAATGTCGTCGTATGGACATTCATATATGCACTCGACAC
CAGCAGCTGAGGCCGAGCATCCTCGGGCCACCAGCTCACTTTCTAACCAT
AGGCCAACTTCATCGCGAGGCGCACTGGGCAGCCCTATCGGACGACCGTT
GGTCCAGGAACCAAGGACAGTCCCCATACGGCAGCATATCTCACCCACCC
GAGCCTTCAGTCGCGCACTTCCTACCTCCCCCAGCGCCGCTTATCGTGAA
AGCCCGCAACGGCGCATAGAGAAAGAAGAGGCAAAGTCCTTACGAGATGC
CTTGCAACAGATGGACCTGGAGGATGACGTCGAGCTCCATGCAGCAGCAC
AAGATGAAGCTACCGAGCTGGTGTGGATGCACCAGAACCCCGGTGTTCCC
TATAAGAACCCATATGCACCATATCACAATCCTGATTTGGACACGCTCCA
GAAAAGCCCAGATAGGAAAAGTCAGTATTCGCGTGACGAGAGGCTAGGCT
CTCCTACTCCACGACGGGGCAGTCGTCGTCTTGCCTACCAGGGATCGACT
ATAAGCTACAACGGTCCTAGCAGCATTCAAGAGTCGGATGAAAGGGCAGC
ACATGATGAGCAGGAAGTTGCTCTGGAAAGGGATCTCCCCAGCCCTAAGA
AGAATGGCACTCTACGGAAGAACCTCAAGGTCAACTTTGCGTTGCCGCGG
GACGAAGTTTCAACGCAGCATACCAGCAGCAGCTATGGGCTAGGCTTGGC
GAATGTTGGTAGAGATTCATCCAAAGGTATCTTTAGGAACCCGAACGACC
AGATATACGAAGAACCTCAGCTTTCTCCTCAGAAGGATGAGGACACTCGA
CCGGACTTCTCAAGGTCGGACTCTTCGGCTCTAAGGAATAAGCCACGCAA
CGCTCTTCCTCGCGGTTCTCGTCCCCTACCTAGTCGGTTCAGTAGCCTTC
CTTTTGTGGACAAGCTGGCTCGCTTCGAACTTCATAAGAACCCCCCAAGC
CAGTCAAGAAACCCAGAGTATAGAATGAACGATCCGCTTCCACAACCTCC
TACGGCAGGCTCTGAGGTTGAGGAGCAAGATACCCCTATGAAAAATGGCC
TAGAAATCCGCAGCGATGACATCCGAGCAGCCACTAGCAAGAAACTGAGA
GATCGGAGCACTCGCCTACCTATGCCAACCGCTGTGAGTGATCGTGCTGG
TCGGCCGATTGTGAGTTTTGATCCGACTTGGAAGCCAACTGAGGCACAAA
GTCCGCGCAACCGAGACAGCTTCAAGGAAAGGGATGCAACACCGGACGTG
CCTTCTCCCGAGCCTGCTGCTCCGACTATCGAGGTGTCTGAGGCACCGTC
AATTCCGGTGATCAACTTGCCGGACGACAAAGAGCCCACTATCTCTGAGA
TGGCAGGATCATCCCAGAGCACAACGACCGGTGCGAAGTCATCGTCGAGC
CCGCCCAAAAAGAACGAAGCTCCCAAGCGATCCCCAAGAAAGCCAACAGC
AGGGTTGCAGAATCGGTGGCTATCCACCTATAGCCGCTCTGGTGTTCCCA
CCGCAACATGTGAGGCATGTTCTCTCCCAATTGCAGGGAAGATAGTGACC
GCTGCGGGATCCCGATTCCACCCTGAGTGCTTCGTGTGCCACCATTGCCA
GACTGCTCTGGAGTGTGTTGCATTCTATGAGGAACCTGAAGTGAAGCGCC
AAGAGCGTCTCGCGCAAGCTTCCAGTGATGATGAAGAGGCCCATGCACTG
AGGTTCTATTGCCACCTTGATTTCCATGAGCTATTCAGTCCAAGGTGCAA
GAGCTGCAAAACCCCGATAGAGGGAGAAGTGGTTGTTGCTTGTGGCGCTG
AGTGGCATGTCGGGCACTTCTTCTGTGCCGAGTGTGGTGATGTACTGTCT
CCCCCTCCGCTTTGTAATCGATGACTGCTAACATATCTCCTCTAGCCTTT
CAACGCCGATACACCATTCGTAGAAAAGGATGGCTTTGCATGGTGCTTGC
AGTGCCACTCTCGTCGCACAGCTCCTCGGTGCCTTGGATGCAAGAAGCCA
GTGTTAGAGGATGTTGTGATAAGTGCGGTCGGAGGGCAGTGGCATGATGA
ATGCTTTGTCTGCCACGAGTGCGGGGATGGATTTGGTCCCGACGGTCGTT
ACTTCGTCCGAGAAGGGGAACCGAGAAGGACAGCCAAGGGACGCATCATC
GGCGGGCCGGTCCAATTGGCTGTCTGTGAAAGATGTGAAGGTATTCGCTT
GAAAGCGTCGCCATGATGTGGGGTATCTGTTGGATGGTGGAGTCCGGGGT
CTGAGGCTCCAACAACCGATGGCCGACACCAATGACATGATCATTGTGGC
CATCTGCATAGTGCTGAGCGCAGTGCGCTTAACAAGATGCATCATCCGAC
GTTATACGGCCAATGTTTTCTATGTATGTCTCTCAGTTTTTTTTTTTCCT
TTCCTTTTTTTCCTTCTATTTGTTGCGACCTATGAATTGCATAGCATCCA
GCGGGAGTCTACGATAGCGTATACTTAGGTGAATTATGATAGTGAATAGT
TTACGAGACATTTTCTTTCTTGGTTCAGATAAAGTGTTGAATACTTTAAA
GCCAGCAGCGCAACGGCATCTGGTTGTTGCATGGAAAACATCTCACTAGC
TACAACTAACGAAGAACCCCCTGGGGTGAGATGCGTGCATAATTCCAGAG
CCGGTTCAAGGCTATTCCGGAAAAGGAAGGCACGCTCCTGTCATCTCGGC
TCGAGGCATCGCTTCGTCTCGCGGCAACTTCCCTGCGAGGGTGTGATTCC
TTTGAACTAGCCTTCCCCGTCCCTAGATGGGCAACAAGGCAGCTTGGCTT
TGGCAAGTGTCGATTGTCATACGAGTGCCTCGAGTCGAGGCACTTGTGTA
GTCAGTTCGGCAAGACGGAGAAGCTTGGATGTCAACCCCAGCTTTGCGGG
GGTTCCCGAGCTTTTGCGGGGATCGTGCCCTCCATTGCCGTCATCGCATC
AAAGCCAGATGTACGACCATCTATCGATTGCACGGCTCTTGCGCAGGGAT
CGGGAGATTCAGCTGCTGCAATGTCCTTCGGATGACGTCTGATCCAT back to topCoding sequence (CDS) from alignment at ch7:3324099..3327845+ >KJC3_010437-T2 ID=KJC3_010437-T2|Name=KJC3_010437-T2|organism=Aspergillus niger KJC3|type=CDS|length=4278bp|location=Sequence derived from alignment at ch7:3324099..3327845+ (Aspergillus niger KJC3)
ATGGCCAGTATGATGCATAGGCCTCAATTTCACAAGGCCAGGGACAGCCA
GCGCAAGGTCTCGCCTCCCGGTCCAACTTACATGTCCAACGATCAGATCG
CGACCTATCTGAAAGATCTGCGGACGAATCGTCCTGCCCGTCCCAGCGGA
TCCAGGCCGCTTCCTTCGAGATCAACTGGATCGTCCTCTGACACTCGGGA
GGATCCCCCTCCACGGGCAGCATCTGCAATGTCGTCGTATGGACATTCAT
ATATGCACTCGACACCAGCAGCTGAGGCCGAGCATCCTCGGGCCACCAGC
TCACTTTCTAACCATAGGCCAACTTCATCGCGAGGCGCACTGGGCAGCCC
TATCGGACGACCGTTGGTCCAGGAACCAAGGACAGTCCCCATACGGCAGC
ATATCTCACCCACCCGAGCCTTCAGTCGCGCACTTCCTACCTCCCCCAGC
GCCGCTTATCGTGAAAGCCCGCAACGGCGCATAGAGAAAGAAGAGGCAAA
GTCCTTACGAGATGCCTTGCAACAGATGGACCTGGAGGATGACGTCGAGC
TCCATGCAGCAGCACAAGATGAAGCTACCGAGCTGGTGTGGATGCACCAG
AACCCCGGTGTTCCCTATAAGAACCCATATGCACCATATCACAATCCTGA
TTTGGACACGCTCCAGAAAAGCCCAGATAGGAAAAGTCAGTATTCGCGTG
ACGAGAGGCTAGGCTCTCCTACTCCACGACGGGGCAGTCGTCGTCTTGCC
TACCAGGGATCGACTATAAGCTACAACGGTCCTAGCAGCATTCAAGAGTC
GGATGAAAGGGCAGCACATGATGAGCAGGAAGTTGCTCTGGAAAGGGATC
TCCCCAGCCCTAAGAAGAATGGCACTCTACGGAAGAACCTCAAGGTCAAC
TTTGCGTTGCCGCGGGACGAAGTTTCAACGCAGCATACCAGCAGCAGCTA
TGGGCTAGGCTTGGCGAATGTTGGTAGAGATTCATCCAAAGGTATCTTTA
GGAACCCGAACGACCAGATATACGAAGAACCTCAGCTTTCTCCTCAGAAG
GATGAGGACACTCGACCGGACTTCTCAAGGTCGGACTCTTCGGCTCTAAG
GAATAAGCCACGCAACGCTCTTCCTCGCGGTTCTCGTCCCCTACCTAGTC
GGTTCAGTAGCCTTCCTTTTGTGGACAAGCTGGCTCGCTTCGAACTTCAT
AAGAACCCCCCAAGCCAGTCAAGAAACCCAGAGTATAGAATGAACGATCC
GCTTCCACAACCTCCTACGGCAGGCTCTGAGGTTGAGGAGCAAGATACCC
CTATGAAAAATGGCCTAGAAATCCGCAGCGATGACATCCGAGCAGCCACT
AGCAAGAAACTGAGAGATCGGAGCACTCGCCTACCTATGCCAACCGCTGT
GAGTGATCGTGCTGGTCGGCCGATTGTGAGTTTTGATCCGACTTGGAAGC
CAACTGAGGCACAAAGTCCGCGCAACCGAGACAGCTTCAAGGAAAGGGAT
GCAACACCGGACGTGCCTTCTCCCGAGCCTGCTGCTCCGACTATCGAGGT
GTCTGAGGCACCGTCAATTCCGGTGATCAACTTGCCGGACGACAAAGAGC
CCACTATCTCTGAGATGGCAGGATCATCCCAGAGCACAACGACCGGTGCG
AAGTCATCGTCGAGCCCGCCCAAAAAGAACGAAGCTCCCAAGCGATCCCC
AAGAAAGCCAACAGCAGGGTTGCAGAATCGGTGGCTATCCACCTATAGCC
GCTCTGGTGTTCCCACCGCAACATGTGAGGCATGTTCTCTCCCAATTGCA
GGGAAGATAGTGACCGCTGCGGGATCCCGATTCCACCCTGAGTGCTTCGT
GTGCCACCATTGCCAGACTGCTCTGGAGTGTGTTGCATTCTATGAGGAAC
CTGAAGTGAAGCGCCAAGAGCGTCTCGCGCAAGCTTCCAGTGATGATGAA
GAGGCCCATGCACTGAGGTTCTATTGCCACCTTGATTTCCATGAGCTATT
CAGTCCAAGGTGCAAGAGCTGCAAAACCCCGATAGAGGGAGAAGTGGTTG
TTGCTTGTGGCGCTGAGTGGCATGTCGGGCACTTCTTCTGTGCCGAGTGT
GGTGATGTACTGTCTCCCCCTCCGCTTTGTAATCGATGAATGGCCAGTAT
GATGCATAGGCCTCAATTTCACAAGGCCAGGGACAGCCAGCGCAAGGTCT
CGCCTCCCGGTCCAACTTACATGTCCAACGATCAGATCGCGACCTATCTG
AAAGATCTGCGGACGAATCGTCCTGCCCGTCCCAGCGGATCCAGGCCGCT
TCCTTCGAGATCAACTGGATCGTCCTCTGACACTCGGGAGGATCCCCCTC
CACGGGCAGCATCTGCAATGTCGTCGTATGGACATTCATATATGCACTCG
ACACCAGCAGCTGAGGCCGAGCATCCTCGGGCCACCAGCTCACTTTCTAA
CCATAGGCCAACTTCATCGCGAGGCGCACTGGGCAGCCCTATCGGACGAC
CGTTGGTCCAGGAACCAAGGACAGTCCCCATACGGCAGCATATCTCACCC
ACCCGAGCCTTCAGTCGCGCACTTCCTACCTCCCCCAGCGCCGCTTATCG
TGAAAGCCCGCAACGGCGCATAGAGAAAGAAGAGGCAAAGTCCTTACGAG
ATGCCTTGCAACAGATGGACCTGGAGGATGACGTCGAGCTCCATGCAGCA
GCACAAGATGAAGCTACCGAGCTGGTGTGGATGCACCAGAACCCCGGTGT
TCCCTATAAGAACCCATATGCACCATATCACAATCCTGATTTGGACACGC
TCCAGAAAAGCCCAGATAGGAAAAGTCAGTATTCGCGTGACGAGAGGCTA
GGCTCTCCTACTCCACGACGGGGCAGTCGTCGTCTTGCCTACCAGGGATC
GACTATAAGCTACAACGGTCCTAGCAGCATTCAAGAGTCGGATGAAAGGG
CAGCACATGATGAGCAGGAAGTTGCTCTGGAAAGGGATCTCCCCAGCCCT
AAGAAGAATGGCACTCTACGGAAGAACCTCAAGGTCAACTTTGCGTTGCC
GCGGGACGAAGTTTCAACGCAGCATACCAGCAGCAGCTATGGGCTAGGCT
TGGCGAATGTTGGTAGAGATTCATCCAAAGGTATCTTTAGGAACCCGAAC
GACCAGATATACGAAGAACCTCAGCTTTCTCCTCAGAAGGATGAGGACAC
TCGACCGGACTTCTCAAGGTCGGACTCTTCGGCTCTAAGGAATAAGCCAC
GCAACGCTCTTCCTCGCGGTTCTCGTCCCCTACCTAGTCGGTTCAGTAGC
CTTCCTTTTGTGGACAAGCTGGCTCGCTTCGAACTTCATAAGAACCCCCC
AAGCCAGTCAAGAAACCCAGAGTATAGAATGAACGATCCGCTTCCACAAC
CTCCTACGGCAGGCTCTGAGGTTGAGGAGCAAGATACCCCTATGAAAAAT
GGCCTAGAAATCCGCAGCGATGACATCCGAGCAGCCACTAGCAAGAAACT
GAGAGATCGGAGCACTCGCCTACCTATGCCAACCGCTGTGAGTGATCGTG
CTGGTCGGCCGATTGTGAGTTTTGATCCGACTTGGAAGCCAACTGAGGCA
CAAAGTCCGCGCAACCGAGACAGCTTCAAGGAAAGGGATGCAACACCGGA
CGTGCCTTCTCCCGAGCCTGCTGCTCCGACTATCGAGGTGTCTGAGGCAC
CGTCAATTCCGGTGATCAACTTGCCGGACGACAAAGAGCCCACTATCTCT
GAGATGGCAGGATCATCCCAGAGCACAACGACCGGTGCGAAGTCATCGTC
GAGCCCGCCCAAAAAGAACGAAGCTCCCAAGCGATCCCCAAGAAAGCCAA
CAGCAGGGTTGCAGAATCGGTGGCTATCCACCTATAGCCGCTCTGGTGTT
CCCACCGCAACATGTGAGGCATGTTCTCTCCCAATTGCAGGGAAGATAGT
GACCGCTGCGGGATCCCGATTCCACCCTGAGTGCTTCGTGTGCCACCATT
GCCAGACTGCTCTGGAGTGTGTTGCATTCTATGAGGAACCTGAAGTGAAG
CGCCAAGAGCGTCTCGCGCAAGCTTCCAGTGATGATGAAGAGGCCCATGC
ACTGAGGTTCTATTGCCACCTTGATTTCCATGAGCTATTCAGTCCAAGGT
GCAAGAGCTGCAAAACCCCGATAGAGGGAGAAGTGGTTGTTGCTTGTGGC
GCTGAGTGGCATGTCGGGCACTTCTTCTGTGCCGAGTGTGGTGATGTACT
GTCTCCCCCTCCGCTTTGTAATCGATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010437-T2.utr5p1 | KJC3_010437-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010437-T2.utr3p1 | KJC3_010437-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001781 |
| DBxref | PFAM:PF00412 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3324099..3327845 + |
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