You are here

Home

KJC3_010438-T1, KJC3_010438-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010438-T1
Unique NameKJC3_010438-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3328068..3328831+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010438-T1 ID=KJC3_010438-T1|Name=KJC3_010438-T1|organism=Aspergillus niger KJC3|type=mRNA|length=764bp|location=Sequence derived from alignment at ch7:3328068..3328831+ (Aspergillus niger KJC3)
ATGGCAGACGATTCAGATTACAAGCTCAAGTGCGATGCCTCTCTCTCTGA
GGAAATAGAGAATGTCATTACTTCACCTTTCTCTCCCGAGGAAGAGAAAG
CCCTCGTGCGCAAGGTGGACTTGACTTTACTTCCAACAATATGGATCATG
TATCTGCTCTCCTACATGGATCGAACCAAGTTGGTACCCCAGTCCTCCTA
TACATCGCTACAAATCCGTAACTAATCTCACCATATCAGTATCGGCAACG
CAAAAATCTCAGGTATGCAGGCGGATCTTGATTTGACATCGGGCCAATAT
TCAATTGCCCTGGTTGTCTTCTTCATCGGATATGTTGTCTTTGAAGTTCC
CAGCAAGTACGTTCCGCTCCAATAACTCAGGATGGTCGCACGTTAATACT
AACCGTTACTGAACTATATAGTTTGGTGCTAAGCCACACGCGCCCTTCGC
TGTTTTTAACTGGAATTATGGTTATATGGGGAGCACTTACCTGTGTGATG
GGCGTGATAAAGGACTACAAGCATCTTGTGGTGTTGCGTGCATTGATTGG
TGAGACATCTTACTGACTCATCTGTGGGGATAGTATGTTCCTAACTTTGG
TAGGCTGCGTGGAAGCAGGCTTCGCACCTGGTGTTCTCCTTGTCCTCTCG
TCTTGGTACAAACGAACTGAGCAATCGAAGCGATTCGGTGTCTACATATC
TGCTGCAATCCTTTCTGGGGCGTTTGGTTCTTTGCTAGCAGCGGGTATTA
TTCAAGGCCTATAA
back to top

Coding sequence (CDS) from alignment at ch7:3328068..3328831+

>KJC3_010438-T1 ID=KJC3_010438-T1|Name=KJC3_010438-T1|organism=Aspergillus niger KJC3|type=CDS|length=2340bp|location=Sequence derived from alignment at ch7:3328068..3328831+ (Aspergillus niger KJC3)
ATGGCAGACGATTCAGATTACAAGCTCAAGTGCGATGCCTCTCTCTCTGA
GGAAATAGAGAATGTCATTACTTCACCTTTCTCTCCCGAGGAAGAGAAAG
CCCTCGTGCGCAAGGTGGACTTGACTTTACTTCCAACAATATGGATCATG
TATCTGCTCTCCTACATGGATCGAACCAATATCGGCAACGCAAAAATCTC
AGGTATGCAGGCGGATCTTGATTTGACATCGGGCCAATATTCAATTGCCC
TGGTTGTCTTCTTCATCGGATATGTTGTCTTTGAAGTTCCCAGCAATTTG
GTGCTAAGCCACACGCGCCCTTCGCTGTTTTTAACTGGAATTATGGTTAT
ATGGGGAGCACTTACCTGTGTGATGGGCGTGATAAAGGACTACAAGCATC
TTGTGGTGTTGCGTGCATTGATTGGCTGCGTGGAAGCAGGCTTCGCACCT
GGTGTTCTCCTTGTCCTCTCGTCTTGGTACAAACGAACTGAGCAATCGAA
GCGATTCGGTGTCTACATATCTGCTGCAATCCTTTCTGGGGCGTTTGGTT
CTTTGCTAGCAGCGGGTATTATTCAAGGCCTATAAATGGCAGACGATTCA
GATTACAAGCTCAAGTGCGATGCCTCTCTCTCTGAGGAAATAGAGAATGT
CATTACTTCACCTTTCTCTCCCGAGGAAGAGAAAGCCCTCGTGCGCAAGG
TGGACTTGACTTTACTTCCAACAATATGGATCATGTATCTGCTCTCCTAC
ATGGATCGAACCAATATCGGCAACGCAAAAATCTCAGGTATGCAGGCGGA
TCTTGATTTGACATCGGGCCAATATTCAATTGCCCTGGTTGTCTTCTTCA
TCGGATATGTTGTCTTTGAAGTTCCCAGCAATTTGGTGCTAAGCCACACG
CGCCCTTCGCTGTTTTTAACTGGAATTATGGTTATATGGGGAGCACTTAC
CTGTGTGATGGGCGTGATAAAGGACTACAAGCATCTTGTGGTGTTGCGTG
CATTGATTGGCTGCGTGGAAGCAGGCTTCGCACCTGGTGTTCTCCTTGTC
CTCTCGTCTTGGTACAAACGAACTGAGCAATCGAAGCGATTCGGTGTCTA
CATATCTGCTGCAATCCTTTCTGGGGCGTTTGGTTCTTTGCTAGCAGCGG
GTATTATTCAAGGCCTATAAATGGCAGACGATTCAGATTACAAGCTCAAG
TGCGATGCCTCTCTCTCTGAGGAAATAGAGAATGTCATTACTTCACCTTT
CTCTCCCGAGGAAGAGAAAGCCCTCGTGCGCAAGGTGGACTTGACTTTAC
TTCCAACAATATGGATCATGTATCTGCTCTCCTACATGGATCGAACCAAT
ATCGGCAACGCAAAAATCTCAGGTATGCAGGCGGATCTTGATTTGACATC
GGGCCAATATTCAATTGCCCTGGTTGTCTTCTTCATCGGATATGTTGTCT
TTGAAGTTCCCAGCAATTTGGTGCTAAGCCACACGCGCCCTTCGCTGTTT
TTAACTGGAATTATGGTTATATGGGGAGCACTTACCTGTGTGATGGGCGT
GATAAAGGACTACAAGCATCTTGTGGTGTTGCGTGCATTGATTGGCTGCG
TGGAAGCAGGCTTCGCACCTGGTGTTCTCCTTGTCCTCTCGTCTTGGTAC
AAACGAACTGAGCAATCGAAGCGATTCGGTGTCTACATATCTGCTGCAAT
CCTTTCTGGGGCGTTTGGTTCTTTGCTAGCAGCGGGTATTATTCAAGGCC
TATAAATGGCAGACGATTCAGATTACAAGCTCAAGTGCGATGCCTCTCTC
TCTGAGGAAATAGAGAATGTCATTACTTCACCTTTCTCTCCCGAGGAAGA
GAAAGCCCTCGTGCGCAAGGTGGACTTGACTTTACTTCCAACAATATGGA
TCATGTATCTGCTCTCCTACATGGATCGAACCAATATCGGCAACGCAAAA
ATCTCAGGTATGCAGGCGGATCTTGATTTGACATCGGGCCAATATTCAAT
TGCCCTGGTTGTCTTCTTCATCGGATATGTTGTCTTTGAAGTTCCCAGCA
ATTTGGTGCTAAGCCACACGCGCCCTTCGCTGTTTTTAACTGGAATTATG
GTTATATGGGGAGCACTTACCTGTGTGATGGGCGTGATAAAGGACTACAA
GCATCTTGTGGTGTTGCGTGCATTGATTGGCTGCGTGGAAGCAGGCTTCG
CACCTGGTGTTCTCCTTGTCCTCTCGTCTTGGTACAAACGAACTGAGCAA
TCGAAGCGATTCGGTGTCTACATATCTGCTGCAATCCTTTCTGGGGCGTT
TGGTTCTTTGCTAGCAGCGGGTATTATTCAAGGCCTATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010438KJC3_010438Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010438-T1.exon1KJC3_010438-T1.exon1Aspergillus niger KJC3exon
KJC3_010438-T1.exon2KJC3_010438-T1.exon2Aspergillus niger KJC3exon
KJC3_010438-T1.exon3KJC3_010438-T1.exon3Aspergillus niger KJC3exon
KJC3_010438-T1.exon4KJC3_010438-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010438-T1.cdsKJC3_010438-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010438-T1KJC3_010438-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3328068..3328831 +
Powered by Drupal