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KJC3_010441-T1, KJC3_010441-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010441-T1
Unique NameKJC3_010441-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3331604..3332681+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010441-T1 ID=KJC3_010441-T1|Name=KJC3_010441-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1078bp|location=Sequence derived from alignment at ch7:3331604..3332681+ (Aspergillus niger KJC3)
CCTACCACCACTTATCATCACTACATTTACCATCGTGACAATTAATCCAA
CCACATCACTCTTTGAGACTACTCCACAGCAGCGCAATATACCACGCATC
GACATTCAGTCTACCCACAGACATAATCACCCCACCACCAAAATGACAAG
CGCAACAGCATCAACAACAACAACCCCACCCTTCCAATTCCCCCTCACCT
ACTCATTTCCAGCCTTCTTCACCCCCCAACCCAACAGCACGACACGCACC
TCCCAACTCCAAAAATGGTCTTCCCTGATCCAATCCTGGTGCCGACACCA
CCGCGTCTACCGACTATCGTTAATCGAAGCCATCGAGTCCCCATTATTCC
ATAACACGACGCTCCGAAAGCGCATATCGATGAGCGATGCGCGGGATATT
CTAGACTGGATGGCGAAAAGTGAAGAGGAGGGCGGTGGCGGGAAGAGAGC
GGAGTGGATTGATGGTGGGAGTAAGAGTGTTGCGTGGATTTGGTGGAAGA
GGCCTGAGGAGTGGGCAGGGTTGATTGCGGATTGGGTATGTATTCTTATA
TTCCGGATCATCATTCGAGATGTTGGAGGGGAGTTGGGGGTAGAGTTGGG
ATTGAGGGGAGATAGTTGCTAATTGCTTATTTTTGCTGTATAGGTGGAAA
ACACTGGCCAGAAGAACGTGGTGCTTACGGTTTATGAGTTGTTGGAGGGG
GAGGCCACGATGTCGCAAGGTAGGTTAAGTGGATTTGCTCCTAATCATTG
GGTGATGCTGGTATGGTATGGTGGCTAATGGTTTGGCTGGAATAGAATGG
CATGGGATGGACCCCGATGTGATGCACAAGTCCCTCAATGTTCTCGTGAA
ACGGGGCAAGGCGCAGGTCTTCGGTAGCGAAGGCCAGGAGGGTGTCAAGT
TCTTCTAGGAATCGGCTAGGTTATCTGGCTGATTTACAGCATGCGGTTGA
CTCGTGGGTTCGTTCGAAAGCAATGTCCATTGGCAACGCTGAGGATACGG
CAACTATCTTCATGATAAAGTAAGGGATATACAAAAACCAGACAATGTCC
CCGAAAGAGCTATACGAGTTTCCCGCTG
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Coding sequence (CDS) from alignment at ch7:3331604..3332681+

>KJC3_010441-T1 ID=KJC3_010441-T1|Name=KJC3_010441-T1|organism=Aspergillus niger KJC3|type=CDS|length=1746bp|location=Sequence derived from alignment at ch7:3331604..3332681+ (Aspergillus niger KJC3)
ATGACAAGCGCAACAGCATCAACAACAACAACCCCACCCTTCCAATTCCC
CCTCACCTACTCATTTCCAGCCTTCTTCACCCCCCAACCCAACAGCACGA
CACGCACCTCCCAACTCCAAAAATGGTCTTCCCTGATCCAATCCTGGTGC
CGACACCACCGCGTCTACCGACTATCGTTAATCGAAGCCATCGAGTCCCC
ATTATTCCATAACACGACGCTCCGAAAGCGCATATCGATGAGCGATGCGC
GGGATATTCTAGACTGGATGGCGAAAAGTGAAGAGGAGGGCGGTGGCGGG
AAGAGAGCGGAGTGGATTGATGGTGGGAGTAAGAGTGTTGCGTGGATTTG
GTGGAAGAGGCCTGAGGAGTGGGCAGGGTTGATTGCGGATTGGGTGGAAA
ACACTGGCCAGAAGAACGTGGTGCTTACGGTTTATGAGTTGTTGGAGGGG
GAGGCCACGATGTCGCAAGAATGGCATGGGATGGACCCCGATGTGATGCA
CAAGTCCCTCAATGTTCTCGTGAAACGGGGCAAGGCGCAGGTCTTCGGTA
GCGAAGGCCAGGAGGGTGTCAAGTTCTTCTAGATGACAAGCGCAACAGCA
TCAACAACAACAACCCCACCCTTCCAATTCCCCCTCACCTACTCATTTCC
AGCCTTCTTCACCCCCCAACCCAACAGCACGACACGCACCTCCCAACTCC
AAAAATGGTCTTCCCTGATCCAATCCTGGTGCCGACACCACCGCGTCTAC
CGACTATCGTTAATCGAAGCCATCGAGTCCCCATTATTCCATAACACGAC
GCTCCGAAAGCGCATATCGATGAGCGATGCGCGGGATATTCTAGACTGGA
TGGCGAAAAGTGAAGAGGAGGGCGGTGGCGGGAAGAGAGCGGAGTGGATT
GATGGTGGGAGTAAGAGTGTTGCGTGGATTTGGTGGAAGAGGCCTGAGGA
GTGGGCAGGGTTGATTGCGGATTGGGTGGAAAACACTGGCCAGAAGAACG
TGGTGCTTACGGTTTATGAGTTGTTGGAGGGGGAGGCCACGATGTCGCAA
GAATGGCATGGGATGGACCCCGATGTGATGCACAAGTCCCTCAATGTTCT
CGTGAAACGGGGCAAGGCGCAGGTCTTCGGTAGCGAAGGCCAGGAGGGTG
TCAAGTTCTTCTAGATGACAAGCGCAACAGCATCAACAACAACAACCCCA
CCCTTCCAATTCCCCCTCACCTACTCATTTCCAGCCTTCTTCACCCCCCA
ACCCAACAGCACGACACGCACCTCCCAACTCCAAAAATGGTCTTCCCTGA
TCCAATCCTGGTGCCGACACCACCGCGTCTACCGACTATCGTTAATCGAA
GCCATCGAGTCCCCATTATTCCATAACACGACGCTCCGAAAGCGCATATC
GATGAGCGATGCGCGGGATATTCTAGACTGGATGGCGAAAAGTGAAGAGG
AGGGCGGTGGCGGGAAGAGAGCGGAGTGGATTGATGGTGGGAGTAAGAGT
GTTGCGTGGATTTGGTGGAAGAGGCCTGAGGAGTGGGCAGGGTTGATTGC
GGATTGGGTGGAAAACACTGGCCAGAAGAACGTGGTGCTTACGGTTTATG
AGTTGTTGGAGGGGGAGGCCACGATGTCGCAAGAATGGCATGGGATGGAC
CCCGATGTGATGCACAAGTCCCTCAATGTTCTCGTGAAACGGGGCAAGGC
GCAGGTCTTCGGTAGCGAAGGCCAGGAGGGTGTCAAGTTCTTCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000814ESCRT II complex
Vocabulary: Biological Process
TermDefinition
GO:0071985multivesicular body sorting pathway
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010441KJC3_010441Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010441-T1KJC3_010441-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010441-T1.utr5p1KJC3_010441-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010441-T1.exon1KJC3_010441-T1.exon1Aspergillus niger KJC3exon
KJC3_010441-T1.exon2KJC3_010441-T1.exon2Aspergillus niger KJC3exon
KJC3_010441-T1.exon3KJC3_010441-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010441-T1.cdsKJC3_010441-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010441-T1.utr3p1KJC3_010441-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR014041
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR008570
DBxrefPFAM:PF05871
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3331604..3332681 +
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