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KJC3_010453-T1, KJC3_010453-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010453-T1
Unique NameKJC3_010453-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3357335..3358636-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010453-T1 ID=KJC3_010453-T1|Name=KJC3_010453-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1302bp|location=Sequence derived from alignment at ch7:3357335..3358636- (Aspergillus niger KJC3)
GCTCGGATTATCTCAGATTTGCTACTCACGTAATACATTTCGGGAATTTT
TGCTTCTAGTCTATGAAGAGGATGCCTTTTCTAGCATTACCACACCTGTT
CCTCCTTGGTAGACTTGGGGCGGTGCAGCCGAATACGAGATCCTGGTCCT
CCTCGTCTACAAGCTTCTGATTACTGTCTTGCCAATCAACACTTCAGGAT
GTAGATGTATCAGCCATGCTTCTCCGTGAATACTAACCTCAATTTCGGAA
GCACCTTTACACAAACCGATTCTAATCGGCCCGTTCAATTCAAGGCAGTG
AAACAAGCATTTGGCAAGGGACTATAAGAACAATCTGGATGGAGCCAAGA
TTGAGAGATTCGCACCACAATCCTAACCAACACTCCTCTACAGAAAGAAT
TAGCACCACAGAAATGCGTTCTCTCCAGATCTTGGCTTCCACTCTTGCTG
TCGGCCTCGCGGCCGCGGCGACTCCCTCCTCCTTTACTCCGTCCGTCGAT
GCGGATGTTGGCGTGGTTTTCACCAAAGATGGGAGCCATCTAACTCTCAC
TTCGGGGGCCTTAATCAACCAGAACTGTAAGAAAAATTGCTTCTGACACA
CATGAACCCTTTGCATTCCGTGCTCACAACGCTTCCACAGGGACCATCAA
CATTCCCACCTTGTACCTGGAGGACACCACCTCCACTGATGACGAGTACG
TCATCATCATGATCGACCCAACCATCAATGAGGATGGTGTCTCAACAGCC
GCCCTACACTGGTACCAGCCCTACTTAGCCTACTCGTCTGGTGTCTTGGA
AATCAGCAACAAGAGCGCCCCAAACGCGGAGTATGTCTACCCGACACCGC
TGGAAGGACCTGCCCACGATTACATCCTGCTGCTGTACAGCCAGCCAGAA
GACTACTCCCTGCCCGACTGCCTCGAGAGCTTGCTGCCTGCAACAGATGC
GGCCCGTCTTGGGTTCAACATTGATGAGTTCGAGGAAGTAACGGGCTTGG
GTACTCCCGTGGCGGCGAATTGGTTTCAAGTCGTGAACCCGACCCCTGCA
ACTACCACCTATGCTATCACGTCTACTCTCGTTTCCACATATGCGTGTGA
GGCCACCGCCACGGCTACTTCTAGCTCATGAGGGTAGATTGAAGTCTGTC
GGCTATTGACGAGCGGTTGCTCCGTACTAAGAGTATGGAGATGTGTCTTG
GATGTTCTTATTGACTTCGGCTTACTGGAAGACGAGGCAAAACACTGTAC
AAATACTATAAATATAGACAAGTATCAAGATTCTGAATAATCAACTTCGG
GC
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Coding sequence (CDS) from alignment at ch7:3357335..3358636-

>KJC3_010453-T1 ID=KJC3_010453-T1|Name=KJC3_010453-T1|organism=Aspergillus niger KJC3|type=CDS|length=1458bp|location=Sequence derived from alignment at ch7:3357335..3358636- (Aspergillus niger KJC3)
GGACCATCAACATTCCCACCTTGTACCTGGAGGACACCACCTCCACTGAT
GACGAGTACGTCATCATCATGATCGACCCAACCATCAATGAGGATGGTGT
CTCAACAGCCGCCCTACACTGGTACCAGCCCTACTTAGCCTACTCGTCTG
GTGTCTTGGAAATCAGCAACAAGAGCGCCCCAAACGCGGAGTATGTCTAC
CCGACACCGCTGGAAGGACCTGCCCACGATTACATCCTGCTGCTGTACAG
CCAGCCAGAAGACTACTCCCTGCCCGACTGCCTCGAGAGCTTGCTGCCTG
CAACAGATGCGGCCCGTCTTGGGTTCAACATTGATGAGTTCGAGGAAGTA
ACGGGCTTGGGTACTCCCGTGGCGGCGAATTGGTTTCAAGTCGTGAACCC
GACCCCTGCAACTACCACCTATGCTATCACGTCTACTCTCGTTTCCACAT
ATGCGTGTGAGGCCACCGCCACGGCTACTTCTAGCTCATGAATGGAGCCA
AGATTGAGAGATTCGCACCACAATCCTAACCAACACTCCTCTACAGAAAG
AATTAGCACCACAGAAATGCGTTCTCTCCAGATCTTGGCTTCCACTCTTG
CTGTCGGCCTCGCGGCCGCGGCGACTCCCTCCTCCTTTACTCCGTCCGTC
GATGCGGATGTTGGCGTGGTTTTCACCAAAGATGGGAGCCATCTAACTCT
CACTTCGGGGGCCTTAATCAACCAGAACTGGACCATCAACATTCCCACCT
TGTACCTGGAGGACACCACCTCCACTGATGACGAGTACGTCATCATCATG
ATCGACCCAACCATCAATGAGGATGGTGTCTCAACAGCCGCCCTACACTG
GTACCAGCCCTACTTAGCCTACTCGTCTGGTGTCTTGGAAATCAGCAACA
AGAGCGCCCCAAACGCGGAGTATGTCTACCCGACACCGCTGGAAGGACCT
GCCCACGATTACATCCTGCTGCTGTACAGCCAGCCAGAAGACTACTCCCT
GCCCGACTGCCTCGAGAGCTTGCTGCCTGCAACAGATGCGGCCCGTCTTG
GGTTCAACATTGATGAGTTCGAGGAAGTAACGGGCTTGGGTACTCCCGTG
GCGGCGAATTGGTTTCAAGTCGTGAACCCGACCCCTGCAACTACCACCTA
TGCTATCACGTCTACTCTCGTTTCCACATATGCGTGTGAGGCCACCGCCA
CGGCTACTTCTAGCTCATGAATGGAGCCAAGATTGAGAGATTCGCACCAC
AATCCTAACCAACACTCCTCTACAGAAAGAATTAGCACCACAGAAATGCG
TTCTCTCCAGATCTTGGCTTCCACTCTTGCTGTCGGCCTCGCGGCCGCGG
CGACTCCCTCCTCCTTTACTCCGTCCGTCGATGCGGATGTTGGCGTGGTT
TTCACCAAAGATGGGAGCCATCTAACTCTCACTTCGGGGGCCTTAATCAA
CCAGAACT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010453KJC3_010453Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010453-T1KJC3_010453-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010453-T1.cdsKJC3_010453-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010453-T1.utr3p1KJC3_010453-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010453-T1.exon2KJC3_010453-T1.exon2Aspergillus niger KJC3exon
KJC3_010453-T1.exon1KJC3_010453-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010453-T1.utr5p1KJC3_010453-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR035810
DBxrefInterPro:IPR036610
DBxrefInterPro:IPR008914
DBxrefPFAM:PF01161
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3357335..3358636 -
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