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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3357335..3358636- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010453-T1 ID=KJC3_010453-T1|Name=KJC3_010453-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1302bp|location=Sequence derived from alignment at ch7:3357335..3358636- (Aspergillus niger KJC3)
GCTCGGATTATCTCAGATTTGCTACTCACGTAATACATTTCGGGAATTTT
TGCTTCTAGTCTATGAAGAGGATGCCTTTTCTAGCATTACCACACCTGTT
CCTCCTTGGTAGACTTGGGGCGGTGCAGCCGAATACGAGATCCTGGTCCT
CCTCGTCTACAAGCTTCTGATTACTGTCTTGCCAATCAACACTTCAGGAT
GTAGATGTATCAGCCATGCTTCTCCGTGAATACTAACCTCAATTTCGGAA
GCACCTTTACACAAACCGATTCTAATCGGCCCGTTCAATTCAAGGCAGTG
AAACAAGCATTTGGCAAGGGACTATAAGAACAATCTGGATGGAGCCAAGA
TTGAGAGATTCGCACCACAATCCTAACCAACACTCCTCTACAGAAAGAAT
TAGCACCACAGAAATGCGTTCTCTCCAGATCTTGGCTTCCACTCTTGCTG
TCGGCCTCGCGGCCGCGGCGACTCCCTCCTCCTTTACTCCGTCCGTCGAT
GCGGATGTTGGCGTGGTTTTCACCAAAGATGGGAGCCATCTAACTCTCAC
TTCGGGGGCCTTAATCAACCAGAACTGTAAGAAAAATTGCTTCTGACACA
CATGAACCCTTTGCATTCCGTGCTCACAACGCTTCCACAGGGACCATCAA
CATTCCCACCTTGTACCTGGAGGACACCACCTCCACTGATGACGAGTACG
TCATCATCATGATCGACCCAACCATCAATGAGGATGGTGTCTCAACAGCC
GCCCTACACTGGTACCAGCCCTACTTAGCCTACTCGTCTGGTGTCTTGGA
AATCAGCAACAAGAGCGCCCCAAACGCGGAGTATGTCTACCCGACACCGC
TGGAAGGACCTGCCCACGATTACATCCTGCTGCTGTACAGCCAGCCAGAA
GACTACTCCCTGCCCGACTGCCTCGAGAGCTTGCTGCCTGCAACAGATGC
GGCCCGTCTTGGGTTCAACATTGATGAGTTCGAGGAAGTAACGGGCTTGG
GTACTCCCGTGGCGGCGAATTGGTTTCAAGTCGTGAACCCGACCCCTGCA
ACTACCACCTATGCTATCACGTCTACTCTCGTTTCCACATATGCGTGTGA
GGCCACCGCCACGGCTACTTCTAGCTCATGAGGGTAGATTGAAGTCTGTC
GGCTATTGACGAGCGGTTGCTCCGTACTAAGAGTATGGAGATGTGTCTTG
GATGTTCTTATTGACTTCGGCTTACTGGAAGACGAGGCAAAACACTGTAC
AAATACTATAAATATAGACAAGTATCAAGATTCTGAATAATCAACTTCGG
GC back to topCoding sequence (CDS) from alignment at ch7:3357335..3358636- >KJC3_010453-T1 ID=KJC3_010453-T1|Name=KJC3_010453-T1|organism=Aspergillus niger KJC3|type=CDS|length=1458bp|location=Sequence derived from alignment at ch7:3357335..3358636- (Aspergillus niger KJC3)
GGACCATCAACATTCCCACCTTGTACCTGGAGGACACCACCTCCACTGAT
GACGAGTACGTCATCATCATGATCGACCCAACCATCAATGAGGATGGTGT
CTCAACAGCCGCCCTACACTGGTACCAGCCCTACTTAGCCTACTCGTCTG
GTGTCTTGGAAATCAGCAACAAGAGCGCCCCAAACGCGGAGTATGTCTAC
CCGACACCGCTGGAAGGACCTGCCCACGATTACATCCTGCTGCTGTACAG
CCAGCCAGAAGACTACTCCCTGCCCGACTGCCTCGAGAGCTTGCTGCCTG
CAACAGATGCGGCCCGTCTTGGGTTCAACATTGATGAGTTCGAGGAAGTA
ACGGGCTTGGGTACTCCCGTGGCGGCGAATTGGTTTCAAGTCGTGAACCC
GACCCCTGCAACTACCACCTATGCTATCACGTCTACTCTCGTTTCCACAT
ATGCGTGTGAGGCCACCGCCACGGCTACTTCTAGCTCATGAATGGAGCCA
AGATTGAGAGATTCGCACCACAATCCTAACCAACACTCCTCTACAGAAAG
AATTAGCACCACAGAAATGCGTTCTCTCCAGATCTTGGCTTCCACTCTTG
CTGTCGGCCTCGCGGCCGCGGCGACTCCCTCCTCCTTTACTCCGTCCGTC
GATGCGGATGTTGGCGTGGTTTTCACCAAAGATGGGAGCCATCTAACTCT
CACTTCGGGGGCCTTAATCAACCAGAACTGGACCATCAACATTCCCACCT
TGTACCTGGAGGACACCACCTCCACTGATGACGAGTACGTCATCATCATG
ATCGACCCAACCATCAATGAGGATGGTGTCTCAACAGCCGCCCTACACTG
GTACCAGCCCTACTTAGCCTACTCGTCTGGTGTCTTGGAAATCAGCAACA
AGAGCGCCCCAAACGCGGAGTATGTCTACCCGACACCGCTGGAAGGACCT
GCCCACGATTACATCCTGCTGCTGTACAGCCAGCCAGAAGACTACTCCCT
GCCCGACTGCCTCGAGAGCTTGCTGCCTGCAACAGATGCGGCCCGTCTTG
GGTTCAACATTGATGAGTTCGAGGAAGTAACGGGCTTGGGTACTCCCGTG
GCGGCGAATTGGTTTCAAGTCGTGAACCCGACCCCTGCAACTACCACCTA
TGCTATCACGTCTACTCTCGTTTCCACATATGCGTGTGAGGCCACCGCCA
CGGCTACTTCTAGCTCATGAATGGAGCCAAGATTGAGAGATTCGCACCAC
AATCCTAACCAACACTCCTCTACAGAAAGAATTAGCACCACAGAAATGCG
TTCTCTCCAGATCTTGGCTTCCACTCTTGCTGTCGGCCTCGCGGCCGCGG
CGACTCCCTCCTCCTTTACTCCGTCCGTCGATGCGGATGTTGGCGTGGTT
TTCACCAAAGATGGGAGCCATCTAACTCTCACTTCGGGGGCCTTAATCAA
CCAGAACT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010453-T1.utr3p1 | KJC3_010453-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010453-T1.utr5p1 | KJC3_010453-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035810 |
| DBxref | InterPro:IPR036610 |
| DBxref | InterPro:IPR008914 |
| DBxref | PFAM:PF01161 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3357335..3358636 - |
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