|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3367550..3369829+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010459-T1 ID=KJC3_010459-T1|Name=KJC3_010459-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2280bp|location=Sequence derived from alignment at ch7:3367550..3369829+ (Aspergillus niger KJC3)
CTTCAATCCCGCTGTCATTCCCACGCCCTCGTCACAACCCCCCCACAACT
CTCAACTCTTGTATTCGAAAACCCTTATCCATGAGGCTACTATCGAGTAT
ACGATCCTGACAATACCTACTCAGCATCATAGTTCATTTTGCCCTCGTCC
GGCTTTTCCCCGATCATCCAGGGCTGTCAAGTCTTCCCTCCTGAGGATTA
CGAGTCCCATTGAGCTCCGATTCTTCGCTGGCCCGCCATGCTTCAAACGC
AGACTCAGCACGTCTTTTCCCACCAGCACCAGTATCCGCAGGCTGATCCA
TCCTGGCTGCAGCAACAGCAGCAGCAGCATCATCAAACCCACCCGCACCA
GGCTCAGCAACCGCATTCTTCGTTGGTCGCCCAACAGCATGCCCAAGTCC
AGGCGGCTGCAGCCGCCGCTGCAGCTGCTCAACAACAACACTATACTCGC
ATAGCCATGGCTGGGAACGCCGGTGCCGGTAATTCCGCTCAAGGGGCTGG
TGCAGGGGGCATTGGTGGGGATGGTGCTTTGCCCGGTGCGGTGTCCGTGA
TGGATGGTGGCATCAGTGATGAGAATCGGAAAGTTTTCATCTGGGTCGCA
GAACTCCTCGATCCGAGTCGCAGAGAAGCAGCTCTCATGGAGCTTAGCAA
GAAGAGAGAGCAAGTGCCGGAACTTGCGTTGGTTATCTGGCACTCTTTCG
GTACGGAAACCCCCCTTTGATCGGCTTTGTTGGTGGCGACTAACGGGCGT
TTTTTCAGGCGTCATGACCGCTTTACTCCAGGAAATTATCTCTGTATACC
CGTTGTTGAACCCTTCGCAACTGACTGCGGCTGCATCAAATCGAGTTTGC
AATGCGCTTGCTCTCTTGCAGTGTGTGGCTTCCCACAACGAGACTCGCAC
CTTATTTCTAAATGGTACGCAGCCGTCACCTAGGAGCCATCCACCCCACC
CTTCGTTTCCAAGTAGTGTGTGCTTTGACTCACAAAATCTCTTTCGCAAC
AGCTCACATTCCTCTGTTTCTCTATCCTTTCCTCAACACAACGTCAAAGT
CGCGGCCCTTCGAGTATCTCCGCCTCACCTCGCTCGGCGTAATCGGAGCG
TTGGTCAAGAATGACTCATCCGATGTCATCAACTTCCTCCTTACCACAGA
GATCATCCCTCTTTGCCTACGAATTATGGAGACCGGCTCAGAACTTAGCA
AGACCGTTGCAATTTTCATCGTGCAGAAGATTCTCCTCGACGACATCGGC
CTCGCGTATATTTGCGCAACGTATGAGAGGTTCTATGCAGTTGGAACCGT
TCTGAGTAATATGGTTACTCAACTTGTTGAGCAACAGACAGTACGGCTTC
TCAAGCATGTAGTGCGCTGCTTCCTTCGGTGAGTCCTGCCACGATTTTCC
TTGTATCGCGTAACTCGGTTTGGTTCTTCAAATGCTGACTTCTGTAGCTT
GAGTGATAACAGCAGGGCGCGAGAGGCGTTGCGTCAATGCCTTCCCGAAC
CTTTGCGCGATGCGACATTCTCCTCCGTACTCCGCGACGACGCCGCCACT
AAGCGCTGCTTGGCACAGCTTCTCATCAACCTTTCGGATAACGTCTCCGA
TGGCGCACCTGGTGTTGCGATGTAAAAAGTTTCAAAAGCATTTGTTTTCC
TTCTGGTTTACTTGATATATTTGACAACCTTACGACATGCATGGGGCGGG
CTTTAGGCGAAACACGGAATACAAGGCGCAAACTGTGTGGAATGGCAATG
CAATGACGCGATCTCAGGAAAGTTGCACAAAATCAACAGAGAGAAAAAGA
GAAGACATGGCGGGTATGGGAGCACTGGGCTTGGGGGTTTCTGTCTTGTT
ATGGTTTGAATGGTTCTGTTGTTTTGCTGGTTATCTATTCTTTCTTCCCT
GTCCCTGGCTTTTACTGTGGCTTTCTTTCTGCTTTCTATTTACCCCTATT
TTTCATTCGTCCAACACTTCGTTCCCCTTCGGCCATAGTGGTATGGCTGT
GCGGTGGCGTGGATACGGCTGGCGCTATTTTTCTGTGTGCATTTTGCTTG
TCCTCTATGTTCCCCATTCCCCATCCTCCATCTGAGTGAGATAGACCCTC
TTTGAGCGAGATACCAAGATCTAGTTTTATGTTTCGTTGGATGGTGCTGA
TTCTGCTTGTTGCTTAAGTTTCATTTGCTGGTGACCTGATTACATGCAGA
GGCAAATTATCATTATCATAAGACATTCTCTCCTTGACTTCATAATATGA
GCCTGTATCATCATCTAAAATAGTCTCCAC back to topCoding sequence (CDS) from alignment at ch7:3367550..3369829+ >KJC3_010459-T1 ID=KJC3_010459-T1|Name=KJC3_010459-T1|organism=Aspergillus niger KJC3|type=CDS|length=4692bp|location=Sequence derived from alignment at ch7:3367550..3369829+ (Aspergillus niger KJC3)
ATGCTTCAAACGCAGACTCAGCACGTCTTTTCCCACCAGCACCAGTATCC
GCAGGCTGATCCATCCTGGCTGCAGCAACAGCAGCAGCAGCATCATCAAA
CCCACCCGCACCAGGCTCAGCAACCGCATTCTTCGTTGGTCGCCCAACAG
CATGCCCAAGTCCAGGCGGCTGCAGCCGCCGCTGCAGCTGCTCAACAACA
ACACTATACTCGCATAGCCATGGCTGGGAACGCCGGTGCCGGTAATTCCG
CTCAAGGGGCTGGTGCAGGGGGCATTGGTGGGGATGGTGCTTTGCCCGGT
GCGGTGTCCGTGATGGATGGTGGCATCAGTGATGAGAATCGGAAAGTTTT
CATCTGGGTCGCAGAACTCCTCGATCCGAGTCGCAGAGAAGCAGCTCTCA
TGGAGCTTAGCAAGAAGAGAGAGCAAGTGCCGGAACTTGCGTTGGTTATC
TGGCACTCTTTCGGCGTCATGACCGCTTTACTCCAGGAAATTATCTCTGT
ATACCCGTTGTTGAACCCTTCGCAACTGACTGCGGCTGCATCAAATCGAG
TTTGCAATGCGCTTGCTCTCTTGCAGTGTGTGGCTTCCCACAACGAGACT
CGCACCTTATTTCTAAATGCTCACATTCCTCTGTTTCTCTATCCTTTCCT
CAACACAACGTCAAAGTCGCGGCCCTTCGAGTATCTCCGCCTCACCTCGC
TCGGCGTAATCGGAGCGTTGGTCAAGAATGACTCATCCGATGTCATCAAC
TTCCTCCTTACCACAGAGATCATCCCTCTTTGCCTACGAATTATGGAGAC
CGGCTCAGAACTTAGCAAGACCGTTGCAATTTTCATCGTGCAGAAGATTC
TCCTCGACGACATCGGCCTCGCGTATATTTGCGCAACGTATGAGAGGTTC
TATGCAGTTGGAACCGTTCTGAGTAATATGGTTACTCAACTTGTTGAGCA
ACAGACAGTACGGCTTCTCAAGCATGTAGTGCGCTGCTTCCTTCGCTTGA
GTGATAACAGCAGGGCGCGAGAGGCGTTGCGTCAATGCCTTCCCGAACCT
TTGCGCGATGCGACATTCTCCTCCGTACTCCGCGACGACGCCGCCACTAA
GCGCTGCTTGGCACAGCTTCTCATCAACCTTTCGGATAACGTCTCCGATG
GCGCACCTGGTGTTGCGATGTAAATGCTTCAAACGCAGACTCAGCACGTC
TTTTCCCACCAGCACCAGTATCCGCAGGCTGATCCATCCTGGCTGCAGCA
ACAGCAGCAGCAGCATCATCAAACCCACCCGCACCAGGCTCAGCAACCGC
ATTCTTCGTTGGTCGCCCAACAGCATGCCCAAGTCCAGGCGGCTGCAGCC
GCCGCTGCAGCTGCTCAACAACAACACTATACTCGCATAGCCATGGCTGG
GAACGCCGGTGCCGGTAATTCCGCTCAAGGGGCTGGTGCAGGGGGCATTG
GTGGGGATGGTGCTTTGCCCGGTGCGGTGTCCGTGATGGATGGTGGCATC
AGTGATGAGAATCGGAAAGTTTTCATCTGGGTCGCAGAACTCCTCGATCC
GAGTCGCAGAGAAGCAGCTCTCATGGAGCTTAGCAAGAAGAGAGAGCAAG
TGCCGGAACTTGCGTTGGTTATCTGGCACTCTTTCGGCGTCATGACCGCT
TTACTCCAGGAAATTATCTCTGTATACCCGTTGTTGAACCCTTCGCAACT
GACTGCGGCTGCATCAAATCGAGTTTGCAATGCGCTTGCTCTCTTGCAGT
GTGTGGCTTCCCACAACGAGACTCGCACCTTATTTCTAAATGCTCACATT
CCTCTGTTTCTCTATCCTTTCCTCAACACAACGTCAAAGTCGCGGCCCTT
CGAGTATCTCCGCCTCACCTCGCTCGGCGTAATCGGAGCGTTGGTCAAGA
ATGACTCATCCGATGTCATCAACTTCCTCCTTACCACAGAGATCATCCCT
CTTTGCCTACGAATTATGGAGACCGGCTCAGAACTTAGCAAGACCGTTGC
AATTTTCATCGTGCAGAAGATTCTCCTCGACGACATCGGCCTCGCGTATA
TTTGCGCAACGTATGAGAGGTTCTATGCAGTTGGAACCGTTCTGAGTAAT
ATGGTTACTCAACTTGTTGAGCAACAGACAGTACGGCTTCTCAAGCATGT
AGTGCGCTGCTTCCTTCGCTTGAGTGATAACAGCAGGGCGCGAGAGGCGT
TGCGTCAATGCCTTCCCGAACCTTTGCGCGATGCGACATTCTCCTCCGTA
CTCCGCGACGACGCCGCCACTAAGCGCTGCTTGGCACAGCTTCTCATCAA
CCTTTCGGATAACGTCTCCGATGGCGCACCTGGTGTTGCGATGTAAATGC
TTCAAACGCAGACTCAGCACGTCTTTTCCCACCAGCACCAGTATCCGCAG
GCTGATCCATCCTGGCTGCAGCAACAGCAGCAGCAGCATCATCAAACCCA
CCCGCACCAGGCTCAGCAACCGCATTCTTCGTTGGTCGCCCAACAGCATG
CCCAAGTCCAGGCGGCTGCAGCCGCCGCTGCAGCTGCTCAACAACAACAC
TATACTCGCATAGCCATGGCTGGGAACGCCGGTGCCGGTAATTCCGCTCA
AGGGGCTGGTGCAGGGGGCATTGGTGGGGATGGTGCTTTGCCCGGTGCGG
TGTCCGTGATGGATGGTGGCATCAGTGATGAGAATCGGAAAGTTTTCATC
TGGGTCGCAGAACTCCTCGATCCGAGTCGCAGAGAAGCAGCTCTCATGGA
GCTTAGCAAGAAGAGAGAGCAAGTGCCGGAACTTGCGTTGGTTATCTGGC
ACTCTTTCGGCGTCATGACCGCTTTACTCCAGGAAATTATCTCTGTATAC
CCGTTGTTGAACCCTTCGCAACTGACTGCGGCTGCATCAAATCGAGTTTG
CAATGCGCTTGCTCTCTTGCAGTGTGTGGCTTCCCACAACGAGACTCGCA
CCTTATTTCTAAATGCTCACATTCCTCTGTTTCTCTATCCTTTCCTCAAC
ACAACGTCAAAGTCGCGGCCCTTCGAGTATCTCCGCCTCACCTCGCTCGG
CGTAATCGGAGCGTTGGTCAAGAATGACTCATCCGATGTCATCAACTTCC
TCCTTACCACAGAGATCATCCCTCTTTGCCTACGAATTATGGAGACCGGC
TCAGAACTTAGCAAGACCGTTGCAATTTTCATCGTGCAGAAGATTCTCCT
CGACGACATCGGCCTCGCGTATATTTGCGCAACGTATGAGAGGTTCTATG
CAGTTGGAACCGTTCTGAGTAATATGGTTACTCAACTTGTTGAGCAACAG
ACAGTACGGCTTCTCAAGCATGTAGTGCGCTGCTTCCTTCGCTTGAGTGA
TAACAGCAGGGCGCGAGAGGCGTTGCGTCAATGCCTTCCCGAACCTTTGC
GCGATGCGACATTCTCCTCCGTACTCCGCGACGACGCCGCCACTAAGCGC
TGCTTGGCACAGCTTCTCATCAACCTTTCGGATAACGTCTCCGATGGCGC
ACCTGGTGTTGCGATGTAAATGCTTCAAACGCAGACTCAGCACGTCTTTT
CCCACCAGCACCAGTATCCGCAGGCTGATCCATCCTGGCTGCAGCAACAG
CAGCAGCAGCATCATCAAACCCACCCGCACCAGGCTCAGCAACCGCATTC
TTCGTTGGTCGCCCAACAGCATGCCCAAGTCCAGGCGGCTGCAGCCGCCG
CTGCAGCTGCTCAACAACAACACTATACTCGCATAGCCATGGCTGGGAAC
GCCGGTGCCGGTAATTCCGCTCAAGGGGCTGGTGCAGGGGGCATTGGTGG
GGATGGTGCTTTGCCCGGTGCGGTGTCCGTGATGGATGGTGGCATCAGTG
ATGAGAATCGGAAAGTTTTCATCTGGGTCGCAGAACTCCTCGATCCGAGT
CGCAGAGAAGCAGCTCTCATGGAGCTTAGCAAGAAGAGAGAGCAAGTGCC
GGAACTTGCGTTGGTTATCTGGCACTCTTTCGGCGTCATGACCGCTTTAC
TCCAGGAAATTATCTCTGTATACCCGTTGTTGAACCCTTCGCAACTGACT
GCGGCTGCATCAAATCGAGTTTGCAATGCGCTTGCTCTCTTGCAGTGTGT
GGCTTCCCACAACGAGACTCGCACCTTATTTCTAAATGCTCACATTCCTC
TGTTTCTCTATCCTTTCCTCAACACAACGTCAAAGTCGCGGCCCTTCGAG
TATCTCCGCCTCACCTCGCTCGGCGTAATCGGAGCGTTGGTCAAGAATGA
CTCATCCGATGTCATCAACTTCCTCCTTACCACAGAGATCATCCCTCTTT
GCCTACGAATTATGGAGACCGGCTCAGAACTTAGCAAGACCGTTGCAATT
TTCATCGTGCAGAAGATTCTCCTCGACGACATCGGCCTCGCGTATATTTG
CGCAACGTATGAGAGGTTCTATGCAGTTGGAACCGTTCTGAGTAATATGG
TTACTCAACTTGTTGAGCAACAGACAGTACGGCTTCTCAAGCATGTAGTG
CGCTGCTTCCTTCGCTTGAGTGATAACAGCAGGGCGCGAGAGGCGTTGCG
TCAATGCCTTCCCGAACCTTTGCGCGATGCGACATTCTCCTCCGTACTCC
GCGACGACGCCGCCACTAAGCGCTGCTTGGCACAGCTTCTCATCAACCTT
TCGGATAACGTCTCCGATGGCGCACCTGGTGTTGCGATGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010459-T1.utr5p1 | KJC3_010459-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010459-T1.utr3p1 | KJC3_010459-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263Q8J |
| DBxref | InterPro:IPR016024 |
| DBxref | InterPro:IPR011989 |
| DBxref | PFAM:PF04078 |
| Product | Cell differentiation protein rcd1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3367550..3369829 + |
|
