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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3412038..3413341+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010470-T1 ID=KJC3_010470-T1|Name=KJC3_010470-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1304bp|location=Sequence derived from alignment at ch7:3412038..3413341+ (Aspergillus niger KJC3)
CTATTTTAACACCAAAGTTGAAAGGGGTCAAAACTTGGGCACAATAGCTC
TGACCCTGAAGGTCTCCTCTCAGTAATTCGTCCGAGAGCTCATCCGAGGT
ATAGTCTCGACCAAATCAGCCATTACCCCAAATTGCTGATGTTGCTACAT
AAAGCCCGCATAATCCCACCACAATCCGGAGTGATGATAGCCAGCCAGCA
ATTTGGTGACACTCAAACGTCTCCCGTCCTACGACATTGAGTCAAGACCA
GATCACCTACATCCGTTAATTACTACGATATATCATATACAAGCCTCGAG
ATGGACCATACTGAGAAGAGGAAGCCATCTTTTTGTGACCTACCGCAGGA
GATCTTGGAATTGATCGCAGTGGATCTTTCCCTTCTTGATTACTTCAATT
TCCGTGCGGTTTGCCGTCGTATATGGTCTTTGTTTGACTGTTCGGCTCCT
TCATCTGTCCTGCAGAAGATTCGAATGAAAGGGATCCAAACCACTGAAAA
CGATGCTTCGGAAATGGAGGACAAGGATTGTCAATTCGGAAGATGTCATT
ACATATCGCGTGCCCATCTCTTATCTGGCCACGTGCTTGAGCGCGCAGCT
CGTTCAAAAAGTTACGAATTGCTTACGAGTTGGTTGATCGATCATGGTGC
TTCTTTTCGAGAGGTTCCAGGTGGTATTGATCGGCTCTGTTGCGAAGCGT
TCGAGCAAGGCGACTATGAAAGGTTTCGCTGGCTGTTCTCAAAAGGGGCG
TGTTTAAATTCTTTGGCTGGAATGGTATTCCGATTTCCTGGTTATGATGG
GCCAAGGACGCGTGAAGCTCGCCGGTATTATCTACGTCCGCTGGCAAGGG
CATTGAAAGAGGGAGCAAGACCTTCTCGCGACCACGAGGCCTTAAAAAGA
GAGCTATTATTTCGTCGACGTCAACTAAGATTGCGTCAACATAAAGAACT
TTTTGACGGTCGGAGGGAGTCGATCGGCTAGATATGCAGCTTGTGGATAT
CTAGAGGACACGAAGCTTGGAACACATCACTAAGCATGTGGTATCCCAAG
CGATCAAGTTGCTGAAGAGCTGTGTTGCATCCCGCTCATCCCGAGCCCGT
ATCCGATTCTATCACCTTGCTGTTATAGGAAACCAAGATCTAACCACCGC
TTCATAGTCAAACTATGACTTCAATTCACCTTATGATAGTAGCTATCGGG
GGTTGTTCTAATTTACAGACGATCTATCTTCTATTGAACTTGCTCCATCA
TTATAAGTAATAGCATGGAATAAGACACTATAGAACGTTGCTATGTAAGC
TCGG back to topCoding sequence (CDS) from alignment at ch7:3412038..3413341+ >KJC3_010470-T1 ID=KJC3_010470-T1|Name=KJC3_010470-T1|organism=Aspergillus niger KJC3|type=CDS|length=681bp|location=Sequence derived from alignment at ch7:3412038..3413341+ (Aspergillus niger KJC3)
ATGGACCATACTGAGAAGAGGAAGCCATCTTTTTGTGACCTACCGCAGGA
GATCTTGGAATTGATCGCAGTGGATCTTTCCCTTCTTGATTACTTCAATT
TCCGTGCGGTTTGCCGTCGTATATGGTCTTTGTTTGACTGTTCGGCTCCT
TCATCTGTCCTGCAGAAGATTCGAATGAAAGGGATCCAAACCACTGAAAA
CGATGCTTCGGAAATGGAGGACAAGGATTGTCAATTCGGAAGATGTCATT
ACATATCGCGTGCCCATCTCTTATCTGGCCACGTGCTTGAGCGCGCAGCT
CGTTCAAAAAGTTACGAATTGCTTACGAGTTGGTTGATCGATCATGGTGC
TTCTTTTCGAGAGGTTCCAGGTGGTATTGATCGGCTCTGTTGCGAAGCGT
TCGAGCAAGGCGACTATGAAAGGTTTCGCTGGCTGTTCTCAAAAGGGGCG
TGTTTAAATTCTTTGGCTGGAATGGTATTCCGATTTCCTGGTTATGATGG
GCCAAGGACGCGTGAAGCTCGCCGGTATTATCTACGTCCGCTGGCAAGGG
CATTGAAAGAGGGAGCAAGACCTTCTCGCGACCACGAGGCCTTAAAAAGA
GAGCTATTATTTCGTCGACGTCAACTAAGATTGCGTCAACATAAAGAACT
TTTTGACGGTCGGAGGGAGTCGATCGGCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010470-T1.utr5p1 | KJC3_010470-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010470-T1.utr3p1 | KJC3_010470-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036047 |
| DBxref | InterPro:IPR001810 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3412038..3413341 + |
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