You are here

Home

KJC3_010504-T1, KJC3_010504-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010504-T1
Unique NameKJC3_010504-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3555222..3556237+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010504-T1 ID=KJC3_010504-T1|Name=KJC3_010504-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1016bp|location=Sequence derived from alignment at ch7:3555222..3556237+ (Aspergillus niger KJC3)
CAGCCCCTCCCTTCCTTACCAACTTCGAGGTTAGAATGAACTCGGCTTCA
AAAAGAATCAGCAGTCTATCATCGTTCTGACTGCAAAACAGGTAGGTACA
TTTCCAAAAGTTGAGTTATTTTGTTATATTGTTAGACTATATCGGAGGTT
ATGTGGTATAATATTTGACACTGACCTTGTTTCCATCTATTAGTACATAC
CTCGCCATTAGCCGGAGGTGCCAGCACGATTTTTGAATTTGCTTCACCAA
CTTTCGGCGAGTAGCCTCGCCCAGAGAGCATTGAAATACGCTGCTACAAA
ATGACCAGCACACAAGGGTTTATTGTGTTGCGGCAAGTTGTGTCCCAGGC
ACTTGTACAAGCTTTGGGGAATGAGCTGGGCGTTGTTATATTAGAGTCGA
AGCCCACAGTGTGTCGGGAGAAATATAAGGAATATCAAGTTCCACCCTTG
GGATACTCCGTCAGGGATGAGTTCAGTAAAGTACGGTTGCATTACCTGTT
CCTTACGAATTTAGACTAAGTCCTCCGAAGAATACAGATGGAAATCGACT
CGCCCCGTTATTTTACCCGAATCCAGTGCCCCGTGTGCCATCTTCCATTA
ATGTTGGGGTCTTTCATCAAACGGACGCCGATCCGTCAAAATTGAAAACT
GCAAATGCAGAGGAGGTTTATGTTACAATTGCAATTACGGACCTTGGGGA
ACACAACGGTTGGTTTACATTCTATGAAGGCTCACATTCTCGACAGCCAC
CACTTGGGCCAGCTATATCGTTGAATCTGAAGGAAGGGGACGCCGTCGCT
TGGAGTGGTAAACTAGTATATTCTCATGTATCCGGGGGTGGAGGCAAGTT
TATAACATTGGTGTATAGGTAACAGCAGCAAAGAGACGAATCTTCATCTG
GCATCATGTATGTATATCAGGATTGAGTACTACCCTGTTCCATCTGTGCC
CACTGAAGGTCGAATTCCCTTTCCCAGTCTAACCAAGGCAGGCTGAAGTC
TCGTTCCCAATCTAAG
back to top

Coding sequence (CDS) from alignment at ch7:3555222..3556237+

>KJC3_010504-T1 ID=KJC3_010504-T1|Name=KJC3_010504-T1|organism=Aspergillus niger KJC3|type=CDS|length=1044bp|location=Sequence derived from alignment at ch7:3555222..3556237+ (Aspergillus niger KJC3)
ATGACCAGCACACAAGGGTTTATTGTGTTGCGGCAAGTTGTGTCCCAGGC
ACTTGTACAAGCTTTGGGGAATGAGCTGGGCGTTGTTATATTAGAGTCGA
AGCCCACAGTGTGTCGGGAGAAATATAAGGAATATCAAGTTCCACCCTTG
GGATACTCCGTCAGGGATGAGTTCAGTAAAAATACAGATGGAAATCGACT
CGCCCCGTTATTTTACCCGAATCCAGTGCCCCGTGTGCCATCTTCCATTA
ATGTTGGGGTCTTTCATCAAACGGACGCCGATCCGTCAAAATTGAAAACT
GCAAATGCAGAGGAGGTTTATGTTACAATTGCAATTACGGACCTTGGGGA
ACACAACGGTTGGTTTACATTCTATGAAGGCTCACATTCTCGACAGCCAC
CACTTGGGCCAGCTATATCGTTGAATCTGAAGGAAGGGGACGCCGTCGCT
TGGAGTGGTAAACTAGTATATTCTCATGTATCCGGGGGTGGAGGCAAGTT
TATAACATTGGTGTATAGGTAAATGACCAGCACACAAGGGTTTATTGTGT
TGCGGCAAGTTGTGTCCCAGGCACTTGTACAAGCTTTGGGGAATGAGCTG
GGCGTTGTTATATTAGAGTCGAAGCCCACAGTGTGTCGGGAGAAATATAA
GGAATATCAAGTTCCACCCTTGGGATACTCCGTCAGGGATGAGTTCAGTA
AAAATACAGATGGAAATCGACTCGCCCCGTTATTTTACCCGAATCCAGTG
CCCCGTGTGCCATCTTCCATTAATGTTGGGGTCTTTCATCAAACGGACGC
CGATCCGTCAAAATTGAAAACTGCAAATGCAGAGGAGGTTTATGTTACAA
TTGCAATTACGGACCTTGGGGAACACAACGGTTGGTTTACATTCTATGAA
GGCTCACATTCTCGACAGCCACCACTTGGGCCAGCTATATCGTTGAATCT
GAAGGAAGGGGACGCCGTCGCTTGGAGTGGTAAACTAGTATATTCTCATG
TATCCGGGGGTGGAGGCAAGTTTATAACATTGGTGTATAGGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010504KJC3_010504Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010504-T1KJC3_010504-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010504-T1.utr5p1KJC3_010504-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_010504-T1.utr5p2KJC3_010504-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010504-T1.exon1KJC3_010504-T1.exon1Aspergillus niger KJC3exon
KJC3_010504-T1.exon2KJC3_010504-T1.exon2Aspergillus niger KJC3exon
KJC3_010504-T1.exon3KJC3_010504-T1.exon3Aspergillus niger KJC3exon
KJC3_010504-T1.exon4KJC3_010504-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010504-T1.cdsKJC3_010504-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010504-T1.utr3p1KJC3_010504-T1.utr3p1Aspergillus niger KJC3three_prime_UTR
KJC3_010504-T1.utr3p2KJC3_010504-T1.utr3p2Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3555222..3556237 +
Powered by Drupal