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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3566360..3568082- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010507-T1 ID=KJC3_010507-T1|Name=KJC3_010507-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1723bp|location=Sequence derived from alignment at ch7:3566360..3568082- (Aspergillus niger KJC3) GCCATCCTCCTTGAATGCCTCGGACTAAAATGACATTGGTACAAATATAT
TCATAACAGGCCTAAGAATAAAACTAATCTACAACAATCTCAAGTCACAA
TGGCGCGGCAGTCCGACCGTGCCGGGGGTGTTGGGGAGGCTATTCCGCTT
CGCCGGCATCGTTCATCTCTGGAAGGGGTCATCTATCCTGCACCGCAACG
CTTAGCGCCAGAAAAGCATGTTGAAGCTATTAAGGTTTTTGACAGGCTCA
TTCAGCATTTCGAGCCTTTGCAGGCATCTAATAAGGATTACAAACCGATG
ACATTACTACGCCTTATGAAGGAAGAGGTCTCTTCTGAAGACGAGTTCCT
GGTCCTTTTTTTCAATCACATTGAACATGGTGAACTCGAAGTCACGGAAG
CCAGTCTATCTAAGACCCTAGCAAGATTACACAGCTTTCAGGAATGGACT
TCCGAAGAACGAGATGCTCTTAATCAGAGTTTGGCCAACTTCGCTAGTTA
TCTGGTGGATAACTTTTTCCTCCCACGTATGTCGCTGATACGTACCTGAA
CCGTGGCATGCTTACCTTTTTTAGTTAAATCGTTGGCCGCAAAGACTCCT
CAGCCTACGCCGGCATCCCTTTCCCGTCTCGATTTGTCAGGATCCGCTAT
TGGTACCCCACAACGTGTCTCTAATTTGAGAAAAAGCTGCCTTACGCGTG
ACCGGCATCGATGTGTCGTGACCCGAAAGTTCGACATTCGGGAGGCTGAA
ATGCGATACAAGATTGATGGAGAAAACGTGAAGGATGATGACGGAAAGCC
TTTGGTGGAGGAAGCTGAAAACACTGCATATCTAGAAGTGGCGCATATAA
TTCCTCATTCTTTGATGTCTCATAGTGACATTGAAGGAGAGTCAAAATTG
GTACGTCATTCATCTATACCTGTGAATCTTTGCTGACAGGACTGGTAGAC
TGAGCGAAAGCAAGTAGCTCACAAGATTCTGAAGATGTTTAACCCCGATG
CTTTCTACCGCATCATGGGGACTGACATTGACCGACAAATGAACGCGCTT
ACCTTGACCCAAGACCTTCATCAATCGTTCGGTAATTTCGAGATTGCGTT
TGAACCAGTCCAGAATCAGCCACCACACACGTACAAAATCGACTACGTAA
ATTCAAACCGCAGATTTCGAACCCACGCACTTCCTGTTACTCGCACGCTC
TATGTAACCCCGGACAGAAATATAGATCCGCCTTCTGCCCAACTTTTGGA
TCTACATCGTGCTATCGGGCGCATTCTTCATCTTAGTGGCGCAGGTGAAA
GGATCGACAAATTTATTCGGGATATGGAGGATATGGAAGGGGGAGAAGTC
TGCTCTAACGGGTCGACTCGTATTGACGATTACGTTCGTTATAAACTTAC
AGCTGAACTTCACCAGATGTCTGTTTTCTAGGATTGGCGAGTTATTGTTA
ATGACGAAACTTATTGAGGATAATGCTGTGCGTTGTTCACTTATTACTGA
TTTGTGGCTCGGACAACTGTCCTCTCAAAAGCTAATATATCGCCGTGAAT
TTGTATGCACCCATCTCATTAGCTCTTTCGCAGGTAGCCCGGGATATGGA
AAAAAGTTGAGGCAGTGAAGCTGGTTCGCATCCGACTGTCTTATTAACGC
ACTGTAGTTAAATGTTATTTACGCCCATTCAATCTTCCGTCGAAGGCTTG
GCATGGTCCACCGAGCCATAGTT back to topCoding sequence (CDS) from alignment at ch7:3566360..3568082- >KJC3_010507-T1 ID=KJC3_010507-T1|Name=KJC3_010507-T1|organism=Aspergillus niger KJC3|type=CDS|length=3708bp|location=Sequence derived from alignment at ch7:3566360..3568082- (Aspergillus niger KJC3) ACTGAGCGAAAGCAAGTAGCTCACAAGATTCTGAAGATGTTTAACCCCGA TGCTTTCTACCGCATCATGGGGACTGACATTGACCGACAAATGAACGCGC TTACCTTGACCCAAGACCTTCATCAATCGTTCGGTAATTTCGAGATTGCG TTTGAACCAGTCCAGAATCAGCCACCACACACGTACAAAATCGACTACGT AAATTCAAACCGCAGATTTCGAACCCACGCACTTCCTGTTACTCGCACGC TCTATGTAACCCCGGACAGAAATATAGATCCGCCTTCTGCCCAACTTTTG GATCTACATCGTGCTATCGGGCGCATTCTTCATCTTAGTGGCGCAGGTGA AAGGATCGACAAATTTATTCGGGATATGGAGGATATGGAAGGGGGAGAAG TCTGCTCTAACGGGTCGACTCGTATTGACGATTACGTTCGTTATAAACTT ACAGCTGAACTTCACCAGATGTCTGTTTTCTAGTTAAATCGTTGGCCGCA AAGACTCCTCAGCCTACGCCGGCATCCCTTTCCCGTCTCGATTTGTCAGG ATCCGCTATTGGTACCCCACAACGTGTCTCTAATTTGAGAAAAAGCTGCC TTACGCGTGACCGGCATCGATGTGTCGTGACCCGAAAGTTCGACATTCGG GAGGCTGAAATGCGATACAAGATTGATGGAGAAAACGTGAAGGATGATGA CGGAAAGCCTTTGGTGGAGGAAGCTGAAAACACTGCATATCTAGAAGTGG CGCATATAATTCCTCATTCTTTGATGTCTCATAGTGACATTGAAGGAGAG TCAAAATTGATGGCGCGGCAGTCCGACCGTGCCGGGGGTGTTGGGGAGGC TATTCCGCTTCGCCGGCATCGTTCATCTCTGGAAGGGGTCATCTATCCTG CACCGCAACGCTTAGCGCCAGAAAAGCATGTTGAAGCTATTAAGGTTTTT GACAGGCTCATTCAGCATTTCGAGCCTTTGCAGGCATCTAATAAGGATTA CAAACCGATGACATTACTACGCCTTATGAAGGAAGAGGTCTCTTCTGAAG ACGAGTTCCTGGTCCTTTTTTTCAATCACATTGAACATGGTGAACTCGAA GTCACGGAAGCCAGTCTATCTAAGACCCTAGCAAGATTACACAGCTTTCA GGAATGGACTTCCGAAGAACGAGATGCTCTTAATCAGAGTTTGGCCAACT TCGCTAGTTATCTGGTGGATAACTTTTTCCTCCCACACTGAGCGAAAGCA AGTAGCTCACAAGATTCTGAAGATGTTTAACCCCGATGCTTTCTACCGCA TCATGGGGACTGACATTGACCGACAAATGAACGCGCTTACCTTGACCCAA GACCTTCATCAATCGTTCGGTAATTTCGAGATTGCGTTTGAACCAGTCCA GAATCAGCCACCACACACGTACAAAATCGACTACGTAAATTCAAACCGCA GATTTCGAACCCACGCACTTCCTGTTACTCGCACGCTCTATGTAACCCCG GACAGAAATATAGATCCGCCTTCTGCCCAACTTTTGGATCTACATCGTGC TATCGGGCGCATTCTTCATCTTAGTGGCGCAGGTGAAAGGATCGACAAAT TTATTCGGGATATGGAGGATATGGAAGGGGGAGAAGTCTGCTCTAACGGG TCGACTCGTATTGACGATTACGTTCGTTATAAACTTACAGCTGAACTTCA CCAGATGTCTGTTTTCTAGTTAAATCGTTGGCCGCAAAGACTCCTCAGCC TACGCCGGCATCCCTTTCCCGTCTCGATTTGTCAGGATCCGCTATTGGTA CCCCACAACGTGTCTCTAATTTGAGAAAAAGCTGCCTTACGCGTGACCGG CATCGATGTGTCGTGACCCGAAAGTTCGACATTCGGGAGGCTGAAATGCG ATACAAGATTGATGGAGAAAACGTGAAGGATGATGACGGAAAGCCTTTGG TGGAGGAAGCTGAAAACACTGCATATCTAGAAGTGGCGCATATAATTCCT CATTCTTTGATGTCTCATAGTGACATTGAAGGAGAGTCAAAATTGATGGC GCGGCAGTCCGACCGTGCCGGGGGTGTTGGGGAGGCTATTCCGCTTCGCC GGCATCGTTCATCTCTGGAAGGGGTCATCTATCCTGCACCGCAACGCTTA GCGCCAGAAAAGCATGTTGAAGCTATTAAGGTTTTTGACAGGCTCATTCA GCATTTCGAGCCTTTGCAGGCATCTAATAAGGATTACAAACCGATGACAT TACTACGCCTTATGAAGGAAGAGGTCTCTTCTGAAGACGAGTTCCTGGTC CTTTTTTTCAATCACATTGAACATGGTGAACTCGAAGTCACGGAAGCCAG TCTATCTAAGACCCTAGCAAGATTACACAGCTTTCAGGAATGGACTTCCG AAGAACGAGATGCTCTTAATCAGAGTTTGGCCAACTTCGCTAGTTATCTG GTGGATAACTTTTTCCTCCCACACTGAGCGAAAGCAAGTAGCTCACAAGA TTCTGAAGATGTTTAACCCCGATGCTTTCTACCGCATCATGGGGACTGAC ATTGACCGACAAATGAACGCGCTTACCTTGACCCAAGACCTTCATCAATC GTTCGGTAATTTCGAGATTGCGTTTGAACCAGTCCAGAATCAGCCACCAC ACACGTACAAAATCGACTACGTAAATTCAAACCGCAGATTTCGAACCCAC GCACTTCCTGTTACTCGCACGCTCTATGTAACCCCGGACAGAAATATAGA TCCGCCTTCTGCCCAACTTTTGGATCTACATCGTGCTATCGGGCGCATTC TTCATCTTAGTGGCGCAGGTGAAAGGATCGACAAATTTATTCGGGATATG GAGGATATGGAAGGGGGAGAAGTCTGCTCTAACGGGTCGACTCGTATTGA CGATTACGTTCGTTATAAACTTACAGCTGAACTTCACCAGATGTCTGTTT TCTAGTTAAATCGTTGGCCGCAAAGACTCCTCAGCCTACGCCGGCATCCC TTTCCCGTCTCGATTTGTCAGGATCCGCTATTGGTACCCCACAACGTGTC TCTAATTTGAGAAAAAGCTGCCTTACGCGTGACCGGCATCGATGTGTCGT GACCCGAAAGTTCGACATTCGGGAGGCTGAAATGCGATACAAGATTGATG GAGAAAACGTGAAGGATGATGACGGAAAGCCTTTGGTGGAGGAAGCTGAA AACACTGCATATCTAGAAGTGGCGCATATAATTCCTCATTCTTTGATGTC TCATAGTGACATTGAAGGAGAGTCAAAATTGATGGCGCGGCAGTCCGACC GTGCCGGGGGTGTTGGGGAGGCTATTCCGCTTCGCCGGCATCGTTCATCT CTGGAAGGGGTCATCTATCCTGCACCGCAACGCTTAGCGCCAGAAAAGCA TGTTGAAGCTATTAAGGTTTTTGACAGGCTCATTCAGCATTTCGAGCCTT TGCAGGCATCTAATAAGGATTACAAACCGATGACATTACTACGCCTTATG AAGGAAGAGGTCTCTTCTGAAGACGAGTTCCTGGTCCTTTTTTTCAATCA CATTGAACATGGTGAACTCGAAGTCACGGAAGCCAGTCTATCTAAGACCC TAGCAAGATTACACAGCTTTCAGGAATGGACTTCCGAAGAACGAGATGCT CTTAATCAGAGTTTGGCCAACTTCGCTAGTTATCTGGTGGATAACTTTTT CCTCCCAC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_010507-T1.utr5p1 | KJC3_010507-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR003615 |
DBxref | PFAM:PF13391 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch7 | supercontig | ch7:3566360..3568082 - |
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