You are here

Home

KJC3_010524-T1, KJC3_010524-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010524-T1
Unique NameKJC3_010524-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3624725..3626760+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010524-T1 ID=KJC3_010524-T1|Name=KJC3_010524-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2036bp|location=Sequence derived from alignment at ch7:3624725..3626760+ (Aspergillus niger KJC3)
ATGCTACTGAGTGGATCTCTATTGCCTCCGTGTCCAATGCTCGCAAGAGG
AACAAAACTATACTTTTACTAGCAAAAATACCGTGGAAGGTGCCGTTTTG
CTTTAAGAGAACGAGGGCTCCAGCGCATCTCACAACCGCTCATTCTATGT
GGCAAGCAACGATAGAGAATGTCCGTCGAGGGTCGAGTATCGAGGGGAGA
GACCGGGTGTGCAGATGCATGGCGGGTAGTTGATTTTGAGAGACCCAAAC
TACCAGAGAACCTACAGCCTCTCATCACGGACAAGTTCGGCTTATCCGAC
CTGCTCACCGAACTGGAAAGGTACAACGGGGTTTTAAGAAACAGTTGTAG
TATCGCTTGCAATCGAGGCGCGACTCTCCGTACTCCGCGATTATGTGCGC
AACTAGAAAGCATATTCTCGACCCCAGAACCACAGACCTCTGCGTCGTCA
CGTCCCCTAACTTGGGCACGGCTCATTCGCCATGTGGAAAGTCCTGGAGC
GAACCTGCCTGACACCGTTCTGACAATTAAAGATATCGTGGCTCAGCTTC
CAGAAGACGATCGCAAGCCTTCGGTCACTGGGAGGCCATGGCAATTCTTC
AAACCGAGGCCAGATGAGAATGATCTTGGCGCAGAACTCAAATTAATCGA
AAGCACCGTGGCAGAGCTCAGCAATGTCAGCGAACGGGTAAACCAAGGTA
TACTCACAAACCAATTGCCTCTGCCTCTGCTAATTCAGCATTTCCGTTAG
CTGCTCGTGGAATAGACACCTTGAAAGAAGAGTTATTGCGTCGCCATAAT
CGGCTTGTCCTACTTCAAAGCCAGCAATATAGCCCTAGCGGCCCGGTGAA
TCCGTACTCGACCAATCCGACAATAGGAACAGCAATCCAGTCAACAGGTT
GGCAAGATGGGACCAAACAGTCAAAGAATATGGAGCCTCCCAATAACTCA
TCGAGTCAGCATGCTCAGTCCCTTTCTGAAACTTACGGATCCCCTCCAAA
CGCGGCGAGGCGGTTGAAGGTCATAGATCTCATAGATATCTCCAACCAGC
ACGCTCAGTCTGCACCTTACGCCACTGCATCACCAAACGCGGTGGTACAG
TCCAAAGACTTGAAGCCTGTGGAGAACCCGTCTCAGCAGCACAGTCAGTG
TCCAACAGGCCCGTCCACACCATCTGTCAGCCATGCGCCATCTTCCGCTT
GTACGTCGAATACTGATGCCATGTATTCGCTCACTGCGACGGAAGAGCAA
GCATCCCCGAACTCGACAGCGTCGTACTATGTAGCCGAAGAAACAAGCGA
ACTCAGGCAGCCGCACCTTGAGCTTCAGGTGCAGGCGTCACCACAATGTG
AGGGCACTGGGGCTTGCGATCAGCCTACCTCTTTCCTACATACTCTACGA
CGATAAGGAATCATTGGCACGATGCTCTTGCTTTAGAAACGCGACTCATG
CTCATCTTCAGCAGTATAATAAACGATCCCAAGAATGCACTTCTCATCAG
ATGGTCCGACAAAGGGGATTCTTTCATCATTCCAGACAGGAACGAATTTG
CTCGGAAGTTGCTCCCTACCCTATGCGGTCATGGCGATTTCAGAGCATTT
TGCAGGCTTCTATGGTATTACAACTTCCATCTCAAGAAGCAAATCGTAAA
TGAATCCTCTCTGTGGAGATCATGGCAAAGCACTCCTTTCAGAGAATACA
GCAATCCAAATTTTCGGCGAGACGATGAAACCGGGCTTTCGCGTATCGAA
TGTCGAAGGAGGAAGACCAGAAAGTCCCCAGACCCTGAATCTCGGTCTTC
CGTGTCCGATCTGTTTCCCCGTGCACGCGGAGACTTCACTATGGATGAAG
ATCATGTCGCAAGCGACATGTGGCGAGGCGAAAAGACATGTGAGAGTGTC
CGAGGGTCACACACTAGATATCGAAAGCGGAGACGGGTAGCTTAGGGCAA
CAGACGGTGTGAGAACTACATTATACCGTATCATTCTATAGATTATGAAA
GTTCACACATGGTAGTACAGGCTACTCCACACAGAA
back to top

Coding sequence (CDS) from alignment at ch7:3624725..3626760+

>KJC3_010524-T1 ID=KJC3_010524-T1|Name=KJC3_010524-T1|organism=Aspergillus niger KJC3|type=CDS|length=2370bp|location=Sequence derived from alignment at ch7:3624725..3626760+ (Aspergillus niger KJC3)
ATGTCCGTCGAGGGTCGAGTATCGAGGGGAGAGACCGGGTGTGCAGATGC
ATGGCGGGTAGTTGATTTTGAGAGACCCAAACTACCAGAGAACCTACAGC
CTCTCATCACGGACAAGTTCGGCTTATCCGACCTGCTCACCGAACTGGAA
AGGTACAACGGGGTTTTAAGAAACAGTTGTAGTATCGCTTGCAATCGAGG
CGCGACTCTCCGTACTCCGCGATTATGTGCGCAACTAGAAAGCATATTCT
CGACCCCAGAACCACAGACCTCTGCGTCGTCACGTCCCCTAACTTGGGCA
CGGCTCATTCGCCATGTGGAAAGTCCTGGAGCGAACCTGCCTGACACCGT
TCTGACAATTAAAGATATCGTGGCTCAGCTTCCAGAAGACGATCGCAAGC
CTTCGGTCACTGGGAGGCCATGGCAATTCTTCAAACCGAGGCCAGATGAG
AATGATCTTGGCGCAGAACTCAAATTAATCGAAAGCACCGTGGCAGAGCT
CAGCAATGTCAGCGAACGGGTAAACCAAGCTGCTCGTGGAATAGACACCT
TGAAAGAAGAGTTATTGCGTCGCCATAATCGGCTTGTCCTACTTCAAAGC
CAGCAATATAGCCCTAGCGGCCCGGTGAATCCGTACTCGACCAATCCGAC
AATAGGAACAGCAATCCAGTCAACAGGTTGGCAAGATGGGACCAAACAGT
CAAAGAATATGGAGCCTCCCAATAACTCATCGAGTCAGCATGCTCAGTCC
CTTTCTGAAACTTACGGATCCCCTCCAAACGCGGCGAGGCGGTTGAAGGT
CATAGATCTCATAGATATCTCCAACCAGCACGCTCAGTCTGCACCTTACG
CCACTGCATCACCAAACGCGGTGGTACAGTCCAAAGACTTGAAGCCTGTG
GAGAACCCGTCTCAGCAGCACAGTCAGTGTCCAACAGGCCCGTCCACACC
ATCTGTCAGCCATGCGCCATCTTCCGCTTGTACGTCGAATACTGATGCCA
TGTATTCGCTCACTGCGACGGAAGAGCAAGCATCCCCGAACTCGACAGCG
TCGTACTATGTAGCCGAAGAAACAAGCGAACTCAGGCAGCCGCACCTTGA
GCTTCAGGTGCAGGCGTCACCACAATGTGAGGGCACTGGGGCTTGCGATC
AGCCTACCTCTTTCCTACATACTCTACGACGATAAATGTCCGTCGAGGGT
CGAGTATCGAGGGGAGAGACCGGGTGTGCAGATGCATGGCGGGTAGTTGA
TTTTGAGAGACCCAAACTACCAGAGAACCTACAGCCTCTCATCACGGACA
AGTTCGGCTTATCCGACCTGCTCACCGAACTGGAAAGGTACAACGGGGTT
TTAAGAAACAGTTGTAGTATCGCTTGCAATCGAGGCGCGACTCTCCGTAC
TCCGCGATTATGTGCGCAACTAGAAAGCATATTCTCGACCCCAGAACCAC
AGACCTCTGCGTCGTCACGTCCCCTAACTTGGGCACGGCTCATTCGCCAT
GTGGAAAGTCCTGGAGCGAACCTGCCTGACACCGTTCTGACAATTAAAGA
TATCGTGGCTCAGCTTCCAGAAGACGATCGCAAGCCTTCGGTCACTGGGA
GGCCATGGCAATTCTTCAAACCGAGGCCAGATGAGAATGATCTTGGCGCA
GAACTCAAATTAATCGAAAGCACCGTGGCAGAGCTCAGCAATGTCAGCGA
ACGGGTAAACCAAGCTGCTCGTGGAATAGACACCTTGAAAGAAGAGTTAT
TGCGTCGCCATAATCGGCTTGTCCTACTTCAAAGCCAGCAATATAGCCCT
AGCGGCCCGGTGAATCCGTACTCGACCAATCCGACAATAGGAACAGCAAT
CCAGTCAACAGGTTGGCAAGATGGGACCAAACAGTCAAAGAATATGGAGC
CTCCCAATAACTCATCGAGTCAGCATGCTCAGTCCCTTTCTGAAACTTAC
GGATCCCCTCCAAACGCGGCGAGGCGGTTGAAGGTCATAGATCTCATAGA
TATCTCCAACCAGCACGCTCAGTCTGCACCTTACGCCACTGCATCACCAA
ACGCGGTGGTACAGTCCAAAGACTTGAAGCCTGTGGAGAACCCGTCTCAG
CAGCACAGTCAGTGTCCAACAGGCCCGTCCACACCATCTGTCAGCCATGC
GCCATCTTCCGCTTGTACGTCGAATACTGATGCCATGTATTCGCTCACTG
CGACGGAAGAGCAAGCATCCCCGAACTCGACAGCGTCGTACTATGTAGCC
GAAGAAACAAGCGAACTCAGGCAGCCGCACCTTGAGCTTCAGGTGCAGGC
GTCACCACAATGTGAGGGCACTGGGGCTTGCGATCAGCCTACCTCTTTCC
TACATACTCTACGACGATAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010524KJC3_010524Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010524-T1.utr5p1KJC3_010524-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010524-T1.exon1KJC3_010524-T1.exon1Aspergillus niger KJC3exon
KJC3_010524-T1.exon2KJC3_010524-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010524-T1.cdsKJC3_010524-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010524-T1.utr3p1KJC3_010524-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010524-T1KJC3_010524-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3624725..3626760 +
Powered by Drupal