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KJC3_010525-T1, KJC3_010525-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010525-T1
Unique NameKJC3_010525-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3628553..3629266+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010525-T1 ID=KJC3_010525-T1|Name=KJC3_010525-T1|organism=Aspergillus niger KJC3|type=mRNA|length=714bp|location=Sequence derived from alignment at ch7:3628553..3629266+ (Aspergillus niger KJC3)
ATGGATCGCTACGTCGATTTCTGGAACTTAATGAGCTATGACTATGCTGG
CAGCTGGGATTCAATTAGTGGCCACATGGCCAATCTCTTTGAGTCTACTG
ATCGACCCGCGTCTACTCCTTCTAACACCGATCAGGCAATTGATAGTTAC
CTCAATGCTAACATATCTTCTAGAAAGATTGTCCTCGGGCTGCCGCTATA
TGGCCGTGGGTTTTCGAATACGAACGGCCCTGGCCAAGCTTTCACTGGTA
TTCCTGAGGGCGACTGGGAGGAGGGTGTTTATGACTATAAGTCACTCCCG
CTCAGTGGAGATAATGTGACCGTATTAGAGGATATTGGGGCAAGCTATAG
TTATAGTTCGCAGAATCGGCTGATGGTTAGTTATGATACTCCGGAAATAA
TAAGACGCAAGGCGAAATATATCATTGAAAAGGGCCTTGGGGGCGGGATG
TGGTGGGAGGTCTCGGGGGATGAAGAGGGGGAGGACAGTTTGATATCGAT
AGTGAGTATCTCTCAACCACCAGAAAGGCAGTTCTCACATGAACTATAGC
TCGTCGAATCCCTGGGTGGATCAAGAGCATTGGAAAAATCTGAGAATATG
TTGATATATCCTGTATCGTCCTACAAAAACATTAGGGATGGTTGGTTAAG
GCAGAAAACATGAGTCCTTACCGATACACTACTGACATAACTCACAGTTG
AACCGGAGAGGTAA
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Coding sequence (CDS) from alignment at ch7:3628553..3629266+

>KJC3_010525-T1 ID=KJC3_010525-T1|Name=KJC3_010525-T1|organism=Aspergillus niger KJC3|type=CDS|length=1008bp|location=Sequence derived from alignment at ch7:3628553..3629266+ (Aspergillus niger KJC3)
ATGGATCGCTACGTCGATTTCTGGAACTTAATGAGCTATGACTATGCTGG
CAGCTGGGATTCAATTAGTGGCCACATGGCCAATCTCTTTGAGTCTACTG
ATCGACCCGCGTCTACTCCTTCTAACACCGATCAGGCAATTGATAGTTAC
CTCAATGCTAACATATCTTCTAGAAAGATTGTCCTCGGGCTGCCGCTATA
TGGCCGTGGGTTTTCGAATACGAACGGCCCTGGCCAAGCTTTCACTGGTA
TTCCTGAGGGCGACTGGGAGGAGGGTGTTTATGACTATAAGTCACTCCCG
CTCAGTGGAGATAATGTGACCGTATTAGAGGATATTGGGGCAAGCTATAG
TTATAGTTCGCAGAATCGGCTGATGGTTAGTTATGATACTCCGGAAATAA
TAAGACGCAAGGCGAAATATATCATTGAAAAGGGCCTTGGGGGCGGGATG
TGGTGGGAGGTCTCGGGGGATGAAGAGGGGGAGGACATTGAACCGGAGAG
GTAAATGGATCGCTACGTCGATTTCTGGAACTTAATGAGCTATGACTATG
CTGGCAGCTGGGATTCAATTAGTGGCCACATGGCCAATCTCTTTGAGTCT
ACTGATCGACCCGCGTCTACTCCTTCTAACACCGATCAGGCAATTGATAG
TTACCTCAATGCTAACATATCTTCTAGAAAGATTGTCCTCGGGCTGCCGC
TATATGGCCGTGGGTTTTCGAATACGAACGGCCCTGGCCAAGCTTTCACT
GGTATTCCTGAGGGCGACTGGGAGGAGGGTGTTTATGACTATAAGTCACT
CCCGCTCAGTGGAGATAATGTGACCGTATTAGAGGATATTGGGGCAAGCT
ATAGTTATAGTTCGCAGAATCGGCTGATGGTTAGTTATGATACTCCGGAA
ATAATAAGACGCAAGGCGAAATATATCATTGAAAAGGGCCTTGGGGGCGG
GATGTGGTGGGAGGTCTCGGGGGATGAAGAGGGGGAGGACATTGAACCGG
AGAGGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010525KJC3_010525Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010525-T1.exon1KJC3_010525-T1.exon1Aspergillus niger KJC3exon
KJC3_010525-T1.exon2KJC3_010525-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010525-T1.cdsKJC3_010525-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010525-T1KJC3_010525-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteCAZy:GH18
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR029070
DBxrefInterPro:IPR001223
DBxrefInterPro:IPR011583
DBxrefPFAM:PF00704
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3628553..3629266 +
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