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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3647443..3648061+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010532-T1 ID=KJC3_010532-T1|Name=KJC3_010532-T1|organism=Aspergillus niger KJC3|type=mRNA|length=619bp|location=Sequence derived from alignment at ch7:3647443..3648061+ (Aspergillus niger KJC3)
AACGAAGCTTCACTTATAAAACCAGATATTATGCAATTGCCCTTGAGAAC
AGCACTATACCGTCCAACGTGGACACAAAGGCTAGTGAAATATTATCACA
AATCTGCCATCGAGGTATGTTTGCGGGTTCCAGCTATTTGGATGACTAGC
CATTGACCGGTGTCAGACATCGTCCACCCCCATGTCAGCAAATGCGTTGA
AGACAGCATTGATGGAGGGTTATAAACCGAGCTTCCGAACCGTCTCCATA
GGCAAAGCTGCTGATTATACGACGACGCTGAGACCTCAACAAAAGATCTG
TTTCTACCCAGGCAAGCTGCATGGAGGAATCCAGGCGTTCTACTTGGACC
AGATTTTTGCAGATTGCTGTGCAGGAGCCCTTACAGCCAATCTAGCTATC
TCGTATTTGCGGCCAGTCAACCCTCAGGCCCCCTTGAGAATCAGCACCTG
GCCTGTGAAAAAGGAGGGGCGCAAGGTGTATATGGAAGGGTCAATCAAGA
TTCCCGACCACGCCACAGGGGCTCTGGTGGAGGCGGTCCGTGCTACAGCT
TTATTTATTACGCCCAAAAACAAAGCTGTTTGAATCTCTATTCGGATATA
GTTCGATGGCTAGCCACGC back to topCoding sequence (CDS) from alignment at ch7:3647443..3648061+ >KJC3_010532-T1 ID=KJC3_010532-T1|Name=KJC3_010532-T1|organism=Aspergillus niger KJC3|type=CDS|length=1002bp|location=Sequence derived from alignment at ch7:3647443..3648061+ (Aspergillus niger KJC3)
ATGCAATTGCCCTTGAGAACAGCACTATACCGTCCAACGTGGACACAAAG
GCTAGTGAAATATTATCACAAATCTGCCATCGAGACATCGTCCACCCCCA
TGTCAGCAAATGCGTTGAAGACAGCATTGATGGAGGGTTATAAACCGAGC
TTCCGAACCGTCTCCATAGGCAAAGCTGCTGATTATACGACGACGCTGAG
ACCTCAACAAAAGATCTGTTTCTACCCAGGCAAGCTGCATGGAGGAATCC
AGGCGTTCTACTTGGACCAGATTTTTGCAGATTGCTGTGCAGGAGCCCTT
ACAGCCAATCTAGCTATCTCGTATTTGCGGCCAGTCAACCCTCAGGCCCC
CTTGAGAATCAGCACCTGGCCTGTGAAAAAGGAGGGGCGCAAGGTGTATA
TGGAAGGGTCAATCAAGATTCCCGACCACGCCACAGGGGCTCTGGTGGAG
GCGGTCCGTGCTACAGCTTTATTTATTACGCCCAAAAACAAAGCTGTTTG
AATGCAATTGCCCTTGAGAACAGCACTATACCGTCCAACGTGGACACAAA
GGCTAGTGAAATATTATCACAAATCTGCCATCGAGACATCGTCCACCCCC
ATGTCAGCAAATGCGTTGAAGACAGCATTGATGGAGGGTTATAAACCGAG
CTTCCGAACCGTCTCCATAGGCAAAGCTGCTGATTATACGACGACGCTGA
GACCTCAACAAAAGATCTGTTTCTACCCAGGCAAGCTGCATGGAGGAATC
CAGGCGTTCTACTTGGACCAGATTTTTGCAGATTGCTGTGCAGGAGCCCT
TACAGCCAATCTAGCTATCTCGTATTTGCGGCCAGTCAACCCTCAGGCCC
CCTTGAGAATCAGCACCTGGCCTGTGAAAAAGGAGGGGCGCAAGGTGTAT
ATGGAAGGGTCAATCAAGATTCCCGACCACGCCACAGGGGCTCTGGTGGA
GGCGGTCCGTGCTACAGCTTTATTTATTACGCCCAAAAACAAAGCTGTTT
GA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010532-T1.utr5p1 | KJC3_010532-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010532-T1.utr3p1 | KJC3_010532-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029069 |
| DBxref | InterPro:IPR006683 |
| DBxref | PFAM:PF03061 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3647443..3648061 + |
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