You are here

Home

KJC3_010533-T1, KJC3_010533-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010533-T1
Unique NameKJC3_010533-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3649077..3650223+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010533-T1 ID=KJC3_010533-T1|Name=KJC3_010533-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1147bp|location=Sequence derived from alignment at ch7:3649077..3650223+ (Aspergillus niger KJC3)
GGCAGGAAATCACCTTCGGAGATAGGACTCTAGTTACTCTGGGTAAAACT
CTTGTTCTCATTTTATCTTTGAGGCTTGGTGCACAATGCTATTGACTGCC
GCTTACGCAGCTGCCGTACTGAGCAATGCTGCGCTCGGAACACACATCTC
GAGATATGAACGTGATACTGAGTCTTCGGTGTCGGAGGGTGTCTGTGGTG
TTGTGAAGAGTGGTACAGAGTATACTTCACTTACTGTCTCCTTCACAAGA
AATGGAACAAACATGACCTACAGCTGGTCTATGGAGACTACAGGCGATTG
TGTCACGTTCTTGGATGACGTCTTGGAACCCTGTGAGTCAATAGTTCTGT
TTATGCAACAAATATTGATTCATCTGCGTAGGCAAGGGTCCTTCTGCCTT
ATATTGCGAGTATCTTGATTTCTCCTTCAAACTGCCGTCAACTGGCGTGG
CAACGACGCAGTACTCCGACCAGCTGCGGTCATCAAACATGAATGGAAGG
GAACCAGGATCCAGCACCACCAGCTTAAGTACCTCCCGGTCATCTATTGA
GATTACTTCACGGCAGACGCCCCGCACCAGTACGCCCTTTCGAGCGCGAA
TTACAAGCTCAGCTCAAGAAACTTTATCCGTACGTCCCGGTACAATGGGA
GCAACATCCACAGCTGCACTCTCAGTATCGTCCACATCTACTCAACCGAC
TCTGTGTGTCGTGAAGTAAGTCAATCCTTATCCGTGGCTGCAGGGGTGAT
TAGACGCGAGTCTGATCAATTGAGGCATCTCTAACGTTGAACCTCAGAGA
AAGCGACCTTGATCAGGGAGTCTGTTACTGTCTTGATCAAACCATTGTGC
AGTATTCTAGCTCTGTCTGTAAAGTCTTCGGTGACTGAGATGCTACGTAG
TTGTAGTCGCTGATGATGAAAGTCCACCGCGAAAGGACCCTGTTGAACAG
TCAAGGGCTCAGACGAAGTGCTTACTTTACAAGAGCTTTATTGTGCTTTG
GGGACCAGCCCTAATCTCCATTAGTGGCGCGTAGAATGCCAGAGGTCGAG
ATGGACAGTTTGACCCGTCATTTTCCAGGGGCCATCATCGCTCGTACTTT
TGCAATAGGATGCACATCTCAAGCAACCAACACATATATCATCAAAG
back to top

Coding sequence (CDS) from alignment at ch7:3649077..3650223+

>KJC3_010533-T1 ID=KJC3_010533-T1|Name=KJC3_010533-T1|organism=Aspergillus niger KJC3|type=CDS|length=2016bp|location=Sequence derived from alignment at ch7:3649077..3650223+ (Aspergillus niger KJC3)
ATGCTATTGACTGCCGCTTACGCAGCTGCCGTACTGAGCAATGCTGCGCT
CGGAACACACATCTCGAGATATGAACGTGATACTGAGTCTTCGGTGTCGG
AGGGTGTCTGTGGTGTTGTGAAGAGTGGTACAGAGTATACTTCACTTACT
GTCTCCTTCACAAGAAATGGAACAAACATGACCTACAGCTGGTCTATGGA
GACTACAGGCGATTGTGTCACGTTCTTGGATGACGTCTTGGAACCCTGCA
AGGGTCCTTCTGCCTTATATTGCGAGTATCTTGATTTCTCCTTCAAACTG
CCGTCAACTGGCGTGGCAACGACGCAGTACTCCGACCAGCTGCGGTCATC
AAACATGAATGGAAGGGAACCAGGATCCAGCACCACCAGCTTAAGTACCT
CCCGGTCATCTATTGAGATTACTTCACGGCAGACGCCCCGCACCAGTACG
CCCTTTCGAGCGCGAATTACAAGCTCAGCTCAAGAAACTTTATCCGTACG
TCCCGGTACAATGGGAGCAACATCCACAGCTGCACTCTCAGTATCGTCCA
CATCTACTCAACCGACTCTGTGTGTCGTGAAAGAAAGCGACCTTGATCAG
GGAGTCTGTTACTGTCTTGATCAAACCATTGTGCAGTATTCTAGCTCTGT
CTGTAAAGTCTTCGGTGACTGAATGCTATTGACTGCCGCTTACGCAGCTG
CCGTACTGAGCAATGCTGCGCTCGGAACACACATCTCGAGATATGAACGT
GATACTGAGTCTTCGGTGTCGGAGGGTGTCTGTGGTGTTGTGAAGAGTGG
TACAGAGTATACTTCACTTACTGTCTCCTTCACAAGAAATGGAACAAACA
TGACCTACAGCTGGTCTATGGAGACTACAGGCGATTGTGTCACGTTCTTG
GATGACGTCTTGGAACCCTGCAAGGGTCCTTCTGCCTTATATTGCGAGTA
TCTTGATTTCTCCTTCAAACTGCCGTCAACTGGCGTGGCAACGACGCAGT
ACTCCGACCAGCTGCGGTCATCAAACATGAATGGAAGGGAACCAGGATCC
AGCACCACCAGCTTAAGTACCTCCCGGTCATCTATTGAGATTACTTCACG
GCAGACGCCCCGCACCAGTACGCCCTTTCGAGCGCGAATTACAAGCTCAG
CTCAAGAAACTTTATCCGTACGTCCCGGTACAATGGGAGCAACATCCACA
GCTGCACTCTCAGTATCGTCCACATCTACTCAACCGACTCTGTGTGTCGT
GAAAGAAAGCGACCTTGATCAGGGAGTCTGTTACTGTCTTGATCAAACCA
TTGTGCAGTATTCTAGCTCTGTCTGTAAAGTCTTCGGTGACTGAATGCTA
TTGACTGCCGCTTACGCAGCTGCCGTACTGAGCAATGCTGCGCTCGGAAC
ACACATCTCGAGATATGAACGTGATACTGAGTCTTCGGTGTCGGAGGGTG
TCTGTGGTGTTGTGAAGAGTGGTACAGAGTATACTTCACTTACTGTCTCC
TTCACAAGAAATGGAACAAACATGACCTACAGCTGGTCTATGGAGACTAC
AGGCGATTGTGTCACGTTCTTGGATGACGTCTTGGAACCCTGCAAGGGTC
CTTCTGCCTTATATTGCGAGTATCTTGATTTCTCCTTCAAACTGCCGTCA
ACTGGCGTGGCAACGACGCAGTACTCCGACCAGCTGCGGTCATCAAACAT
GAATGGAAGGGAACCAGGATCCAGCACCACCAGCTTAAGTACCTCCCGGT
CATCTATTGAGATTACTTCACGGCAGACGCCCCGCACCAGTACGCCCTTT
CGAGCGCGAATTACAAGCTCAGCTCAAGAAACTTTATCCGTACGTCCCGG
TACAATGGGAGCAACATCCACAGCTGCACTCTCAGTATCGTCCACATCTA
CTCAACCGACTCTGTGTGTCGTGAAAGAAAGCGACCTTGATCAGGGAGTC
TGTTACTGTCTTGATCAAACCATTGTGCAGTATTCTAGCTCTGTCTGTAA
AGTCTTCGGTGACTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010533KJC3_010533Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010533-T1KJC3_010533-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010533-T1.utr5p1KJC3_010533-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010533-T1.exon1KJC3_010533-T1.exon1Aspergillus niger KJC3exon
KJC3_010533-T1.exon2KJC3_010533-T1.exon2Aspergillus niger KJC3exon
KJC3_010533-T1.exon3KJC3_010533-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010533-T1.cdsKJC3_010533-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010533-T1.utr3p1KJC3_010533-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3649077..3650223 +
Powered by Drupal