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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3822047..3823671- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010594-T1 ID=KJC3_010594-T1|Name=KJC3_010594-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1625bp|location=Sequence derived from alignment at ch7:3822047..3823671- (Aspergillus niger KJC3)
CTTTCCCTGGGGATTGTGATTTACACAGACTCACGCTGTTTAGATAGATT
ACTTCCTCTTCCGTTGCTTGTCCACCAATGGTCGGCGATGGCGCGAACAC
ACTCCCCCCGCTACCTTAATCCACCCAAAGGCGTTAGTGAGGTGATTTGC
TTCTGCTTTCCCCTCCCCGCCGCCTGACAGTTTTTTATTTTTTTGTCAAA
CCTCCTCCTGCCTCACCTGTACGACGTCCAAGGCACTGTCGCTGTATTTT
CAATATATAGATCTATTTCTTCTATCTTCAAATTTAGGGAAGATCTACTG
CAGGATTAGTGCTTGAGAATCCGTGACAATCACCCTAAAGCCGATCGCCC
CGAGCTGTCTGTGCCTATCTAATCGATCTTCCAACCACGCGCAATATCCA
TCGCCATGGCCCAGGAAATCCAAAAAGAGAACAATGACCATTTGGTCCAG
TCGTCTGACCCCGAGCATCCCGCCAACTTGATCCCTGATCTCTGTCGCCG
GTTCTACAATTGGGGCTGGGTCACCGGTACTGGTGGCGGGGTAAGCACTG
TTGCACCTCCAGGACGATCATGAGTAATCGCTAATCGATTCCTATTTATT
TCTGCATTAGACTTCCATTCGTCGCGATAATCATATATTCATTGCTCCTT
CTGGCGTGCAGAAGGAGATGATGAAATCCGACAACATCTTTGTCTTGGAA
TTCCCTACGCCCAAGTATCCTCCGTCCGATCGCAAATATATTCGCAAGCC
GCTCGACCTGAAGCCCTCGGCATGCACGCCACTGTTCCTTGCCGCTTTTG
AGCGCGGGGCTGGCTGCTGCATCCACACTCATTCTCAGTGGGCGGTCCTG
GTGACCCTCCTGGTTGAGCGCGAGAAGGGCCCGAACGCCTGCTTCGAAAT
TAGCAACATTGAACAGATTAAGGGTATTCCCCGTGGAAAGGGCAAGGGCA
TGATGGGTTTCTACGATACTCTTCGTATCCCGATTATTGATAACACCGCG
TTTGAGGAAGATCTCACGGGAAGCTTGGAGAAGGCGATGGAGGAGTACCC
TGACACCTATGCTGTCCTTGTGCGGAGACACGGAATGTAAGTTTCATTTT
TTTAACCCTTAACTTTCGAGTGACGGCGGGCTTATGTGTGTGTATAGTTA
TGTGTGGGGAGACGACGTCGTCAAAGCCAAGACTCAGTGCGAGAGTCTAG
ACTACCTGTTCCAGCTTGCTGTTGAGATGCACAAGCTTGGCCTTCCGTGG
GTGAAAGAAACGTAGTTTGAAGGAATTGTTCGCTGAAATGCTCAATTCTT
TGTAGTCCGGCAGTTGGAGGTCTTCTGTCTTGGGCCGCACGGCTATGATG
ACGATACATATGAAATAAACAACTGATTCACGTGAAATACTATAGTCTAG
TACTTTTTTGTAAGAAATGGGGACGGGGAATTTGAGTGCCTAGTATATAT
CTTGGGGAATGTACTGGCTTGGGATTGGTATTCATCCACCAGGCCAGTGT
GTTCTTCGCCAAGTGCTCAAGTTCACCGGACTTTAAGCATTGAACAGAAT
CTCAGTCGTGTTTGTATAGGCAGGAAGGACGTCTTTTTAGTTAAACAATG
GGAAGAGTTGCAAGTTCGAATGGAG back to topCoding sequence (CDS) from alignment at ch7:3822047..3823671- >KJC3_010594-T1 ID=KJC3_010594-T1|Name=KJC3_010594-T1|organism=Aspergillus niger KJC3|type=CDS|length=2187bp|location=Sequence derived from alignment at ch7:3822047..3823671- (Aspergillus niger KJC3)
TTATGTGTGGGGAGACGACGTCGTCAAAGCCAAGACTCAGTGCGAGAGTC
TAGACTACCTGTTCCAGCTTGCTGTTGAGATGCACAAGCTTGGCCTTCCG
TGGGTGAAAGAAACGTAGACTTCCATTCGTCGCGATAATCATATATTCAT
TGCTCCTTCTGGCGTGCAGAAGGAGATGATGAAATCCGACAACATCTTTG
TCTTGGAATTCCCTACGCCCAAGTATCCTCCGTCCGATCGCAAATATATT
CGCAAGCCGCTCGACCTGAAGCCCTCGGCATGCACGCCACTGTTCCTTGC
CGCTTTTGAGCGCGGGGCTGGCTGCTGCATCCACACTCATTCTCAGTGGG
CGGTCCTGGTGACCCTCCTGGTTGAGCGCGAGAAGGGCCCGAACGCCTGC
TTCGAAATTAGCAACATTGAACAGATTAAGGGTATTCCCCGTGGAAAGGG
CAAGGGCATGATGGGTTTCTACGATACTCTTCGTATCCCGATTATTGATA
ACACCGCGTTTGAGGAAGATCTCACGGGAAGCTTGGAGAAGGCGATGGAG
GAGTACCCTGACACCTATGCTGTCCTTGTGCGGAGACACGGAATATGGCC
CAGGAAATCCAAAAAGAGAACAATGACCATTTGGTCCAGTCGTCTGACCC
CGAGCATCCCGCCAACTTGATCCCTGATCTCTGTCGCCGGTTCTACAATT
GGGGCTGGGTCACCGGTACTGGTGGCGGGTTATGTGTGGGGAGACGACGT
CGTCAAAGCCAAGACTCAGTGCGAGAGTCTAGACTACCTGTTCCAGCTTG
CTGTTGAGATGCACAAGCTTGGCCTTCCGTGGGTGAAAGAAACGTAGACT
TCCATTCGTCGCGATAATCATATATTCATTGCTCCTTCTGGCGTGCAGAA
GGAGATGATGAAATCCGACAACATCTTTGTCTTGGAATTCCCTACGCCCA
AGTATCCTCCGTCCGATCGCAAATATATTCGCAAGCCGCTCGACCTGAAG
CCCTCGGCATGCACGCCACTGTTCCTTGCCGCTTTTGAGCGCGGGGCTGG
CTGCTGCATCCACACTCATTCTCAGTGGGCGGTCCTGGTGACCCTCCTGG
TTGAGCGCGAGAAGGGCCCGAACGCCTGCTTCGAAATTAGCAACATTGAA
CAGATTAAGGGTATTCCCCGTGGAAAGGGCAAGGGCATGATGGGTTTCTA
CGATACTCTTCGTATCCCGATTATTGATAACACCGCGTTTGAGGAAGATC
TCACGGGAAGCTTGGAGAAGGCGATGGAGGAGTACCCTGACACCTATGCT
GTCCTTGTGCGGAGACACGGAATATGGCCCAGGAAATCCAAAAAGAGAAC
AATGACCATTTGGTCCAGTCGTCTGACCCCGAGCATCCCGCCAACTTGAT
CCCTGATCTCTGTCGCCGGTTCTACAATTGGGGCTGGGTCACCGGTACTG
GTGGCGGGTTATGTGTGGGGAGACGACGTCGTCAAAGCCAAGACTCAGTG
CGAGAGTCTAGACTACCTGTTCCAGCTTGCTGTTGAGATGCACAAGCTTG
GCCTTCCGTGGGTGAAAGAAACGTAGACTTCCATTCGTCGCGATAATCAT
ATATTCATTGCTCCTTCTGGCGTGCAGAAGGAGATGATGAAATCCGACAA
CATCTTTGTCTTGGAATTCCCTACGCCCAAGTATCCTCCGTCCGATCGCA
AATATATTCGCAAGCCGCTCGACCTGAAGCCCTCGGCATGCACGCCACTG
TTCCTTGCCGCTTTTGAGCGCGGGGCTGGCTGCTGCATCCACACTCATTC
TCAGTGGGCGGTCCTGGTGACCCTCCTGGTTGAGCGCGAGAAGGGCCCGA
ACGCCTGCTTCGAAATTAGCAACATTGAACAGATTAAGGGTATTCCCCGT
GGAAAGGGCAAGGGCATGATGGGTTTCTACGATACTCTTCGTATCCCGAT
TATTGATAACACCGCGTTTGAGGAAGATCTCACGGGAAGCTTGGAGAAGG
CGATGGAGGAGTACCCTGACACCTATGCTGTCCTTGTGCGGAGACACGGA
ATATGGCCCAGGAAATCCAAAAAGAGAACAATGACCATTTGGTCCAGTCG
TCTGACCCCGAGCATCCCGCCAACTTGATCCCTGATCTCTGTCGCCGGTT
CTACAATTGGGGCTGGGTCACCGGTACTGGTGGCGGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0019509 | L-methionine salvage from methylthioadenosine |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046872 | metal ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010594-T1.utr3p1 | KJC3_010594-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010594-T1.utr5p1 | KJC3_010594-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027514 |
| DBxref | InterPro:IPR017714 |
| DBxref | InterPro:IPR036409 |
| DBxref | InterPro:IPR001303 |
| DBxref | PFAM:PF00596 |
| Product | Methylthioribulose-1-phosphate dehydratase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3822047..3823671 - |
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