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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3835077..3836029+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010600-T1 ID=KJC3_010600-T1|Name=KJC3_010600-T1|organism=Aspergillus niger KJC3|type=mRNA|length=953bp|location=Sequence derived from alignment at ch7:3835077..3836029+ (Aspergillus niger KJC3)
CGCCGCGGCTTCTCCGCCTCTCCTCCGCCATCTCCATCCAGTATCTCCGT
TTCACCACCACCGTTCAAGAACCATTTCAATCTACATTCCTCCTTCCCCT
CCCCCAACCACCCAAGATGTTCTTCTTCGGTCTTGGGAAACTCGTCTACG
GTGCGCATAATCCATGTCTCCCCTCCCCCTCCCACGACTCAGCTCACAGG
AGACAACAAGTAACTAACTCAATCGCATAATCACAGTCATCATCCTCCTC
ATCAACTCCCTCGCTGTCCTCTCCGAAGACCGCTTCCTAGCCAGAAGTAC
GCCATTCCCCCATCTGCCACGAGGAAAGCAATAATGAATAAATGATTAAC
TCATGAAATTGAAAACAGTCGGATGGGGCCGCACACAAAATGACCCTGCT
TTCGGCGCAACCTACGATACTACCAGCGTCAAAGCGAAGACTATTAATCT
GATTGCGAGTGTAAGGACTGTTATGCGAAGTACGTCATCCCTCTTACTCA
AATTGTGATTACGCTTGCGAAATGGTGGAATGAAAGGAAAGAAAGAAAGG
GAAACACAAGCTAACCGACCGCGGGGAATTGTTTAGTACCGCTTATTGTG
ATCAATACGATAATTATCGTGTACGAGCTTATTCTGGGTTAAACTGGGAT
GAAGCTGAGCCGGGGATAATATGGAGGAATGGGGAGTTGTGTTATAAATG
CATACATACATGATTACTACTGCTGCTGGGATTCTTGCTCCGGTCTTGGG
AGGGCTAGAGAGGGTGTGTTTGTATTCCAACTTTTTCTTCTTTCTCTTGT
TCTGTTCATTGTACGATTGAAAATGGATTGAATGTGTTGGACAGAATAGG
GATCGACGCTTGCTTTCCTGCTGTAGTCATATGGGGATGTGCGAGTGCTT
AGCTCCTAGTGCTAAGGATGAGACGCATGTGTATGTCTGCCCCGTACCTC
AAG back to topCoding sequence (CDS) from alignment at ch7:3835077..3836029+ >KJC3_010600-T1 ID=KJC3_010600-T1|Name=KJC3_010600-T1|organism=Aspergillus niger KJC3|type=CDS|length=1044bp|location=Sequence derived from alignment at ch7:3835077..3836029+ (Aspergillus niger KJC3)
ATGTTCTTCTTCGGTCTTGGGAAACTCGTCTACGTCATCATCCTCCTCAT
CAACTCCCTCGCTGTCCTCTCCGAAGACCGCTTCCTAGCCAGAATCGGAT
GGGGCCGCACACAAAATGACCCTGCTTTCGGCGCAACCTACGATACTACC
AGCGTCAAAGCGAAGACTATTAATCTGATTGCGAGTGTAAGGACTGTTAT
GCGAATACCGCTTATTGTGATCAATACGATAATTATCGTGTACGAGCTTA
TTCTGGGTTAAATGTTCTTCTTCGGTCTTGGGAAACTCGTCTACGTCATC
ATCCTCCTCATCAACTCCCTCGCTGTCCTCTCCGAAGACCGCTTCCTAGC
CAGAATCGGATGGGGCCGCACACAAAATGACCCTGCTTTCGGCGCAACCT
ACGATACTACCAGCGTCAAAGCGAAGACTATTAATCTGATTGCGAGTGTA
AGGACTGTTATGCGAATACCGCTTATTGTGATCAATACGATAATTATCGT
GTACGAGCTTATTCTGGGTTAAATGTTCTTCTTCGGTCTTGGGAAACTCG
TCTACGTCATCATCCTCCTCATCAACTCCCTCGCTGTCCTCTCCGAAGAC
CGCTTCCTAGCCAGAATCGGATGGGGCCGCACACAAAATGACCCTGCTTT
CGGCGCAACCTACGATACTACCAGCGTCAAAGCGAAGACTATTAATCTGA
TTGCGAGTGTAAGGACTGTTATGCGAATACCGCTTATTGTGATCAATACG
ATAATTATCGTGTACGAGCTTATTCTGGGTTAAATGTTCTTCTTCGGTCT
TGGGAAACTCGTCTACGTCATCATCCTCCTCATCAACTCCCTCGCTGTCC
TCTCCGAAGACCGCTTCCTAGCCAGAATCGGATGGGGCCGCACACAAAAT
GACCCTGCTTTCGGCGCAACCTACGATACTACCAGCGTCAAAGCGAAGAC
TATTAATCTGATTGCGAGTGTAAGGACTGTTATGCGAATACCGCTTATTG
TGATCAATACGATAATTATCGTGTACGAGCTTATTCTGGGTTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010600-T1.utr5p1 | KJC3_010600-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010600-T1.utr3p1 | KJC3_010600-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013880 |
| DBxref | PFAM:PF08571 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3835077..3836029 + |
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