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KJC3_010618-T1, KJC3_010618-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010618-T1
Unique NameKJC3_010618-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3882458..3883515+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010618-T1 ID=KJC3_010618-T1|Name=KJC3_010618-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1058bp|location=Sequence derived from alignment at ch7:3882458..3883515+ (Aspergillus niger KJC3)
ATGGAACAACAACCGCTCCAGCCGCAGCAGGGCGAACTGAACTGGCGCCT
CAGTGCCCATCCGATTACTCTCCTGTTCTTCCTGGGCTTTCGCATCGGCG
CCCTACTGATGTACCTCTTCGGCGTGCTCTTTATCAAGAACTTGTGCGTA
AAACACCTTTCAAACTCAACTTCAAGATTCTAGCTCCCTTAATCTCCAAA
CCCGGAACCTCCCAGAGCTACCCTATCTAGATCCGAGCAAACAACCAAGC
TAACCACTGCAACCAGCGTCCTCGTCTTCATCATCACCCTCCTCATCCTT
TCCGCCGATTTCTACTACCTCAAAAACATCGCCGGTCGCCGACTGGTCGG
TCTCCGTTGGTGGAACGAAGTCAACACTTCCTCCGGCGACTCTACTTGGG
TCTTCGAGTCCTCCGATCCCACTACCCGCACCATCACCGCCACGGACAAA
CGCTTCTTCTGGCTGAGTCTGTACGTGACGCCTGCACTATGGATCGGTCT
CGCCATTTTGGCCATTATTCGTTTGAGCAGTGTGATTTGGTTGAGTCTTG
TTGGTGAGTTTATCCTTGCACTCGTTCTCCCAGCAGGTATATAAGGAGCG
TGGATGCTAACTGTATACAGCCATTGCCCTCGCCTTGACCATCACCAACA
CTGTTGCGTTTTCCCGGTGCGATCGCTTCAGTCAGGCTTCTACCTTCGCG
AATAGTGCGCTTTCGGGTGGAGTTATGAGTAACCTTGCGGGAGGCCTGCT
GGGCAGGCTTTTCAAGTAGGGTGTATGTCTTTGAAAAGAATTATGCTGGG
ATTCATACTGGGTATGGATATCGGTTGTCAGTTTCGTTTTTGATTTGTTC
TTCTAGGTGTGGATTGTGGGGTGTAGTGGTTTTATCGGGAAAGATGGAGC
AGGATGACTTAGGGGACGGGAGCTTTTTGTTTTGTCGGTTATACTCTTCT
AGCGTTATCGGTTAGATTTTATTGTATTGTGTCGTATGTTACTACTGGTG
TATTTTGAGCTTGTAGTTTATAGTCAGATGTCTGACTAGCTGTAAAACGA
GCCTATCC
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Coding sequence (CDS) from alignment at ch7:3882458..3883515+

>KJC3_010618-T1 ID=KJC3_010618-T1|Name=KJC3_010618-T1|organism=Aspergillus niger KJC3|type=CDS|length=1737bp|location=Sequence derived from alignment at ch7:3882458..3883515+ (Aspergillus niger KJC3)
ATGGAACAACAACCGCTCCAGCCGCAGCAGGGCGAACTGAACTGGCGCCT
CAGTGCCCATCCGATTACTCTCCTGTTCTTCCTGGGCTTTCGCATCGGCG
CCCTACTGATGTACCTCTTCGGCGTGCTCTTTATCAAGAACTTCGTCCTC
GTCTTCATCATCACCCTCCTCATCCTTTCCGCCGATTTCTACTACCTCAA
AAACATCGCCGGTCGCCGACTGGTCGGTCTCCGTTGGTGGAACGAAGTCA
ACACTTCCTCCGGCGACTCTACTTGGGTCTTCGAGTCCTCCGATCCCACT
ACCCGCACCATCACCGCCACGGACAAACGCTTCTTCTGGCTGAGTCTGTA
CGTGACGCCTGCACTATGGATCGGTCTCGCCATTTTGGCCATTATTCGTT
TGAGCAGTGTGATTTGGTTGAGTCTTGTTGCCATTGCCCTCGCCTTGACC
ATCACCAACACTGTTGCGTTTTCCCGGTGCGATCGCTTCAGTCAGGCTTC
TACCTTCGCGAATAGTGCGCTTTCGGGTGGAGTTATGAGTAACCTTGCGG
GAGGCCTGCTGGGCAGGCTTTTCAAGTAGATGGAACAACAACCGCTCCAG
CCGCAGCAGGGCGAACTGAACTGGCGCCTCAGTGCCCATCCGATTACTCT
CCTGTTCTTCCTGGGCTTTCGCATCGGCGCCCTACTGATGTACCTCTTCG
GCGTGCTCTTTATCAAGAACTTCGTCCTCGTCTTCATCATCACCCTCCTC
ATCCTTTCCGCCGATTTCTACTACCTCAAAAACATCGCCGGTCGCCGACT
GGTCGGTCTCCGTTGGTGGAACGAAGTCAACACTTCCTCCGGCGACTCTA
CTTGGGTCTTCGAGTCCTCCGATCCCACTACCCGCACCATCACCGCCACG
GACAAACGCTTCTTCTGGCTGAGTCTGTACGTGACGCCTGCACTATGGAT
CGGTCTCGCCATTTTGGCCATTATTCGTTTGAGCAGTGTGATTTGGTTGA
GTCTTGTTGCCATTGCCCTCGCCTTGACCATCACCAACACTGTTGCGTTT
TCCCGGTGCGATCGCTTCAGTCAGGCTTCTACCTTCGCGAATAGTGCGCT
TTCGGGTGGAGTTATGAGTAACCTTGCGGGAGGCCTGCTGGGCAGGCTTT
TCAAGTAGATGGAACAACAACCGCTCCAGCCGCAGCAGGGCGAACTGAAC
TGGCGCCTCAGTGCCCATCCGATTACTCTCCTGTTCTTCCTGGGCTTTCG
CATCGGCGCCCTACTGATGTACCTCTTCGGCGTGCTCTTTATCAAGAACT
TCGTCCTCGTCTTCATCATCACCCTCCTCATCCTTTCCGCCGATTTCTAC
TACCTCAAAAACATCGCCGGTCGCCGACTGGTCGGTCTCCGTTGGTGGAA
CGAAGTCAACACTTCCTCCGGCGACTCTACTTGGGTCTTCGAGTCCTCCG
ATCCCACTACCCGCACCATCACCGCCACGGACAAACGCTTCTTCTGGCTG
AGTCTGTACGTGACGCCTGCACTATGGATCGGTCTCGCCATTTTGGCCAT
TATTCGTTTGAGCAGTGTGATTTGGTTGAGTCTTGTTGCCATTGCCCTCG
CCTTGACCATCACCAACACTGTTGCGTTTTCCCGGTGCGATCGCTTCAGT
CAGGCTTCTACCTTCGCGAATAGTGCGCTTTCGGGTGGAGTTATGAGTAA
CCTTGCGGGAGGCCTGCTGGGCAGGCTTTTCAAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TVP23KJC3_010618Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010618-T1.exon1KJC3_010618-T1.exon1Aspergillus niger KJC3exon
KJC3_010618-T1.exon2KJC3_010618-T1.exon2Aspergillus niger KJC3exon
KJC3_010618-T1.exon3KJC3_010618-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010618-T1.cdsKJC3_010618-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010618-T1.utr3p1KJC3_010618-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010618-T1KJC3_010618-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR008564
DBxrefPFAM:PF05832
ProductGolgi apparatus membrane protein tvp23
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3882458..3883515 +
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