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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3887109..3888626+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010620-T1 ID=KJC3_010620-T1|Name=KJC3_010620-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1518bp|location=Sequence derived from alignment at ch7:3887109..3888626+ (Aspergillus niger KJC3)
CTGAGTTGAGATTGAATGGTCGATAACAGGACTGTTCCCCTCAGGCCTCA
ATGCTGGATCACTAGTCTCAAAACATACAAGCGCTTATTCCTTAGTCATT
CTATCTTGGCTGACATGTATTAATTATTTTGGTTGTCAGCGAACTGAAAC
CCGCATTCTTCCAACTTCACGAGGTTCAATTGTCTCTTACAACTTACGCA
TAAATTTCTTCCTCAATTACTATCGTGTACTCTAGGATGTCACAAAACAC
TACGACCACAGTACAGGAGCTACGCCTGGGCACCCGCAATTCCAAACTGG
CACTAGTACAAGCGGAGCATGTTTCCAAGGAGCTGACCAGTGCTCACCCC
GGAGTCCAGTTTCCCTGGCAAACGGTGGTGGTGCGCGGCGATGCCGACAA
AAGTAGCCCTTTCCTGAAATTTGCAGGGCCATCCGACGCAGCAAAGAACA
TCTGGACCGAAGAGATGGAAACCAAGCTGTGCGCAGGAGAGCTGGACCTC
CTCGTGCATTGCCTCAAAGATATGCCGACGCGTCTACCAGAAACCTGCAC
ACTAGGGGCCATTGTTTATCGGGAAGATCCCACTGATGCGTTGGTGATAA
AGGAGGGGCTGCGGTCGCAGTATACGGATCTGAGTCAACTGCCCCCCGGT
TCTGTGGTGGGCACTAGTTCCACTAGACGGAAAGCCCTACTTCGATACAG
ATACCCGCATTTGAAAGTGGAGGAATGCCGCGGGAACCTGTAAGAAGACT
GCCCCTTTTTGTCACTGAGAGTTGACTCTTTTCTGACTTGACATGGCAGC
GGAACACGGCTGAAAAAGCTAGATGACCCAGAAGGTCCATTTTCGGCAAT
CATCCTGGCCACGGCCGGTATGGTCCGCATCAATCTGGAAGATCGCATTA
CGAAACGCTTGCCTCCCTCGGAGTTCCCGTACGCTGTCGGTCAGGGCGCC
CTGGGCATTGAAATCCGCAAGGAGGACGCCCAGACAAAGACCATGGTTCG
AAAAATCGAAGACCTGGTTACCCGTCGGATCTGTCTGGCAGAGCGGTCAC
TGCTACGCACTCTTCAGGGCGGCTGCTCGTCTCCAGTCGCAGTACATTGC
ACTGTTGAGCAGGCACCAACAGCTTCCTCGCCAGCTCAATTGCGACTAGA
TGGTACTATAATTCATCCCCACGGGACAACTTTGCTATCTGAACGGACGA
CAGCGGAAGTGGGAACGGACGAGGATGCCGAGGCGTTGGGTGCTACGGTC
GCTCAGCAATTGTTGAAGAATGGCGGACAAGCATTGCTGGAAGAGATTCG
TCTGTTACAAGAGACCATTGCGACAGATGCAAAATAGAAGAGGACCTGAA
TATGTACCCTTAACTAGTAGAATTAATCCCCGCTCAATGTACATCGCCAC
GACTGCTTATTTCTCACGCTATCTGTCACCCAGGCTTCATCTGTCAGTAA
GATGGTCCTTTCTACCGAAACAGTACCCTTGGAGCCACAGAGTAGCACCA
CATTGAAAATGATTGGAC back to topCoding sequence (CDS) from alignment at ch7:3887109..3888626+ >KJC3_010620-T1 ID=KJC3_010620-T1|Name=KJC3_010620-T1|organism=Aspergillus niger KJC3|type=CDS|length=2082bp|location=Sequence derived from alignment at ch7:3887109..3888626+ (Aspergillus niger KJC3)
ATGTCACAAAACACTACGACCACAGTACAGGAGCTACGCCTGGGCACCCG
CAATTCCAAACTGGCACTAGTACAAGCGGAGCATGTTTCCAAGGAGCTGA
CCAGTGCTCACCCCGGAGTCCAGTTTCCCTGGCAAACGGTGGTGGTGCGC
GGCGATGCCGACAAAAGTAGCCCTTTCCTGAAATTTGCAGGGCCATCCGA
CGCAGCAAAGAACATCTGGACCGAAGAGATGGAAACCAAGCTGTGCGCAG
GAGAGCTGGACCTCCTCGTGCATTGCCTCAAAGATATGCCGACGCGTCTA
CCAGAAACCTGCACACTAGGGGCCATTGTTTATCGGGAAGATCCCACTGA
TGCGTTGGTGATAAAGGAGGGGCTGCGGTCGCAGTATACGGATCTGAGTC
AACTGCCCCCCGGTTCTGTGGTGGGCACTAGTTCCACTAGACGGAAAGCC
CTACTTCGATACAGATACCCGCATTTGAAAGTGGAGGAATGCCGCGGGAA
CCTCGGAACACGGCTGAAAAAGCTAGATGACCCAGAAGGTCCATTTTCGG
CAATCATCCTGGCCACGGCCGGTATGGTCCGCATCAATCTGGAAGATCGC
ATTACGAAACGCTTGCCTCCCTCGGAGTTCCCGTACGCTGTCGGTCAGGG
CGCCCTGGGCATTGAAATCCGCAAGGAGGACGCCCAGACAAAGACCATGG
TTCGAAAAATCGAAGACCTGGTTACCCGTCGGATCTGTCTGGCAGAGCGG
TCACTGCTACGCACTCTTCAGGGCGGCTGCTCGTCTCCAGTCGCAGTACA
TTGCACTGTTGAGCAGGCACCAACAGCTTCCTCGCCAGCTCAATTGCGAC
TAGATGGTACTATAATTCATCCCCACGGGACAACTTTGCTATCTGAACGG
ACGACAGCGGAAGTGGGAACGGACGAGGATGCCGAGGCGTTGGGTGCTAC
GGTCGCTCAGCAATTGTTGAAGAATGGCGGACAAGCATTGCTGGAAGAGA
TTCGTCTGTTACAAGAGACCATTGCGACAGATGCAAAATAGATGTCACAA
AACACTACGACCACAGTACAGGAGCTACGCCTGGGCACCCGCAATTCCAA
ACTGGCACTAGTACAAGCGGAGCATGTTTCCAAGGAGCTGACCAGTGCTC
ACCCCGGAGTCCAGTTTCCCTGGCAAACGGTGGTGGTGCGCGGCGATGCC
GACAAAAGTAGCCCTTTCCTGAAATTTGCAGGGCCATCCGACGCAGCAAA
GAACATCTGGACCGAAGAGATGGAAACCAAGCTGTGCGCAGGAGAGCTGG
ACCTCCTCGTGCATTGCCTCAAAGATATGCCGACGCGTCTACCAGAAACC
TGCACACTAGGGGCCATTGTTTATCGGGAAGATCCCACTGATGCGTTGGT
GATAAAGGAGGGGCTGCGGTCGCAGTATACGGATCTGAGTCAACTGCCCC
CCGGTTCTGTGGTGGGCACTAGTTCCACTAGACGGAAAGCCCTACTTCGA
TACAGATACCCGCATTTGAAAGTGGAGGAATGCCGCGGGAACCTCGGAAC
ACGGCTGAAAAAGCTAGATGACCCAGAAGGTCCATTTTCGGCAATCATCC
TGGCCACGGCCGGTATGGTCCGCATCAATCTGGAAGATCGCATTACGAAA
CGCTTGCCTCCCTCGGAGTTCCCGTACGCTGTCGGTCAGGGCGCCCTGGG
CATTGAAATCCGCAAGGAGGACGCCCAGACAAAGACCATGGTTCGAAAAA
TCGAAGACCTGGTTACCCGTCGGATCTGTCTGGCAGAGCGGTCACTGCTA
CGCACTCTTCAGGGCGGCTGCTCGTCTCCAGTCGCAGTACATTGCACTGT
TGAGCAGGCACCAACAGCTTCCTCGCCAGCTCAATTGCGACTAGATGGTA
CTATAATTCATCCCCACGGGACAACTTTGCTATCTGAACGGACGACAGCG
GAAGTGGGAACGGACGAGGATGCCGAGGCGTTGGGTGCTACGGTCGCTCA
GCAATTGTTGAAGAATGGCGGACAAGCATTGCTGGAAGAGATTCGTCTGT
TACAAGAGACCATTGCGACAGATGCAAAATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0018160 | peptidyl-pyrromethane cofactor linkage |
| GO:0033014 | tetrapyrrole biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004418 | hydroxymethylbilane synthase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010620-T1.utr5p1 | KJC3_010620-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010620-T1.utr3p1 | KJC3_010620-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022419 |
| DBxref | InterPro:IPR022417 |
| DBxref | InterPro:IPR036803 |
| DBxref | InterPro:IPR022418 |
| DBxref | InterPro:IPR000860 |
| DBxref | PFAM:PF03900 |
| DBxref | PFAM:PF01379 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3887109..3888626 + |
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