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KJC3_010639-T1, KJC3_010639-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010639-T1
Unique NameKJC3_010639-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3946991..3948492-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010639-T1 ID=KJC3_010639-T1|Name=KJC3_010639-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1502bp|location=Sequence derived from alignment at ch7:3946991..3948492- (Aspergillus niger KJC3)
GACGTCGCAACCTATTCTTCCTTTCTCTCTCTTCAGTCGCATTCCACACC
AGCTAATCTTTCTTTTGCTTCAGCGCTTCCAATAATCTCTCATCGATAAT
TTAAATCACCCCACCATGTGTGGACGATACGCTTTAGGCGTGGTACGTGC
CTAATCCCCCGCCCTATGTACTACTCCTGTGGTACTATATATCACGACCA
ACACCCCACACAACCAGTATGAACTGAAGTGGTACTAACACTGGAACAAA
CAAAAAGCGCATGAGCTTCATCCGCCGCCGTCTCCAAGACCAAGGCCTCC
AAGTCGACGACGCACCCCCCGATGAAGACGTCCGCGAAACCTACAACTTC
GCTCCAGGGAACAGCGGCGCTGTTTACCTTGCTGATACGCATATGTACCC
GTCTTCTCATCAGCATGATGAGCCAGCTAGTCAACCTGACACCGAAAAAG
AGACAGCAGAAGGAGAGGAAACAGGGGGAGAAAAGAAGAGCAATGCCACC
AAATACAAGCTCCACAGCATGCGCTGGGGTCTGATTCCCTTCTGGACGAA
ACGCAATCCCGACTACGGAAGTATTATGCGCACAATCAACTGCCGAGATG
ACTCACTAATCGAGGACCGGGGCCTATGGACGTCCATGAAGCGGAGGAAG
CGGTGCGTGGTGGTGTGTCAGGGGTTCTATGAGTGGTTGAAGAAAGGACC
AGGGGGGAAAGAGAAGGTTCCGCATTTCGTGAAGAGGAAGGATGGCGATT
TGATGTATTTTGCGGGGTTGTGGGATAGTGTTAAGTATGAAGGTGGGCTT
ATACATTCTTTATACTTCTGAGGGAATGTTTGGGGCTGGGAGCTAATTGC
AGTATCAGATTCGGATGATTATCTCTACACATATACGATCATCACGACAT
CTTCGAATTCCTACTTGAAGTTCCTGCATGATCGGATGCCCGTGATTCTG
GACCCGAATAGCGAGCAGATGAAGACTTGGCTGGACCCCTCTAGGACGGA
GTGGTCGAAAGAGCTGCAGTCGATCCTCAAGCCATATGAGGGCGAGCTGG
AGTGTTATCCTGTGCCGAAAGAGGTGGGGAAGGTGGGAAATAATTCTCCT
GATTTTATAGTTCCGGTTAGTAGTAAGGAGAATAAGAGCAATATTGCGAA
CTTTCTTGCCAATGCGAAGAAGGGTGCTGCGGTGAAGGTGGAAGAAGGAG
TGAAGGATGAGAGGCCCACGAAAGATGCTGAATGGAGCGAGGATAATGCC
CCCAAGCCGGTTTCTGGAGTCAAGAGGGAACATTCGCCTGATGTCGAGAC
GGAAGATACTAAGTTGCAGAAAACGGAGCCGAGTGTAGCTTCATCGCCGA
AGAAGAGCCCGGAGATGAGTTCACCATCTAAGCCTGAGACGCCAGCAGGG
AAGAAGACGCGCAGTGCCACGCATAATAAGCCGATGAAGAAGAGTCCGCA
GAAGCAGCCCCCTGCAGGGACTCAGCGAATTACGAACTTTTTCGGGAAGT
AA
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Coding sequence (CDS) from alignment at ch7:3946991..3948492-

>KJC3_010639-T1 ID=KJC3_010639-T1|Name=KJC3_010639-T1|organism=Aspergillus niger KJC3|type=CDS|length=3618bp|location=Sequence derived from alignment at ch7:3946991..3948492- (Aspergillus niger KJC3)
ATTCGGATGATTATCTCTACACATATACGATCATCACGACATCTTCGAAT
TCCTACTTGAAGTTCCTGCATGATCGGATGCCCGTGATTCTGGACCCGAA
TAGCGAGCAGATGAAGACTTGGCTGGACCCCTCTAGGACGGAGTGGTCGA
AAGAGCTGCAGTCGATCCTCAAGCCATATGAGGGCGAGCTGGAGTGTTAT
CCTGTGCCGAAAGAGGTGGGGAAGGTGGGAAATAATTCTCCTGATTTTAT
AGTTCCGGTTAGTAGTAAGGAGAATAAGAGCAATATTGCGAACTTTCTTG
CCAATGCGAAGAAGGGTGCTGCGGTGAAGGTGGAAGAAGGAGTGAAGGAT
GAGAGGCCCACGAAAGATGCTGAATGGAGCGAGGATAATGCCCCCAAGCC
GGTTTCTGGAGTCAAGAGGGAACATTCGCCTGATGTCGAGACGGAAGATA
CTAAGTTGCAGAAAACGGAGCCGAGTGTAGCTTCATCGCCGAAGAAGAGC
CCGGAGATGAGTTCACCATCTAAGCCTGAGACGCCAGCAGGGAAGAAGAC
GCGCAGTGCCACGCATAATAAGCCGATGAAGAAGAGTCCGCAGAAGCAGC
CCCCTGCAGGGACTCAGCGAATTACGAACTTTTTCGGGAAGTAACGCATG
AGCTTCATCCGCCGCCGTCTCCAAGACCAAGGCCTCCAAGTCGACGACGC
ACCCCCCGATGAAGACGTCCGCGAAACCTACAACTTCGCTCCAGGGAACA
GCGGCGCTGTTTACCTTGCTGATACGCATATGTACCCGTCTTCTCATCAG
CATGATGAGCCAGCTAGTCAACCTGACACCGAAAAAGAGACAGCAGAAGG
AGAGGAAACAGGGGGAGAAAAGAAGAGCAATGCCACCAAATACAAGCTCC
ACAGCATGCGCTGGGGTCTGATTCCCTTCTGGACGAAACGCAATCCCGAC
TACGGAAGTATTATGCGCACAATCAACTGCCGAGATGACTCACTAATCGA
GGACCGGGGCCTATGGACGTCCATGAAGCGGAGGAAGCGGTGCGTGGTGG
TGTGTCAGGGGTTCTATGAGTGGTTGAAGAAAGGACCAGGGGGGAAAGAG
AAGGTTCCGCATTTCGTGAAGAGGAAGGATGGCGATTTGATGTATTTTGC
GGGGTTGTGGGATAGTGTTAAGTATGAAGATGTGTGGACGATACGCTTTA
GGCGTGATTCGGATGATTATCTCTACACATATACGATCATCACGACATCT
TCGAATTCCTACTTGAAGTTCCTGCATGATCGGATGCCCGTGATTCTGGA
CCCGAATAGCGAGCAGATGAAGACTTGGCTGGACCCCTCTAGGACGGAGT
GGTCGAAAGAGCTGCAGTCGATCCTCAAGCCATATGAGGGCGAGCTGGAG
TGTTATCCTGTGCCGAAAGAGGTGGGGAAGGTGGGAAATAATTCTCCTGA
TTTTATAGTTCCGGTTAGTAGTAAGGAGAATAAGAGCAATATTGCGAACT
TTCTTGCCAATGCGAAGAAGGGTGCTGCGGTGAAGGTGGAAGAAGGAGTG
AAGGATGAGAGGCCCACGAAAGATGCTGAATGGAGCGAGGATAATGCCCC
CAAGCCGGTTTCTGGAGTCAAGAGGGAACATTCGCCTGATGTCGAGACGG
AAGATACTAAGTTGCAGAAAACGGAGCCGAGTGTAGCTTCATCGCCGAAG
AAGAGCCCGGAGATGAGTTCACCATCTAAGCCTGAGACGCCAGCAGGGAA
GAAGACGCGCAGTGCCACGCATAATAAGCCGATGAAGAAGAGTCCGCAGA
AGCAGCCCCCTGCAGGGACTCAGCGAATTACGAACTTTTTCGGGAAGTAA
CGCATGAGCTTCATCCGCCGCCGTCTCCAAGACCAAGGCCTCCAAGTCGA
CGACGCACCCCCCGATGAAGACGTCCGCGAAACCTACAACTTCGCTCCAG
GGAACAGCGGCGCTGTTTACCTTGCTGATACGCATATGTACCCGTCTTCT
CATCAGCATGATGAGCCAGCTAGTCAACCTGACACCGAAAAAGAGACAGC
AGAAGGAGAGGAAACAGGGGGAGAAAAGAAGAGCAATGCCACCAAATACA
AGCTCCACAGCATGCGCTGGGGTCTGATTCCCTTCTGGACGAAACGCAAT
CCCGACTACGGAAGTATTATGCGCACAATCAACTGCCGAGATGACTCACT
AATCGAGGACCGGGGCCTATGGACGTCCATGAAGCGGAGGAAGCGGTGCG
TGGTGGTGTGTCAGGGGTTCTATGAGTGGTTGAAGAAAGGACCAGGGGGG
AAAGAGAAGGTTCCGCATTTCGTGAAGAGGAAGGATGGCGATTTGATGTA
TTTTGCGGGGTTGTGGGATAGTGTTAAGTATGAAGATGTGTGGACGATAC
GCTTTAGGCGTGATTCGGATGATTATCTCTACACATATACGATCATCACG
ACATCTTCGAATTCCTACTTGAAGTTCCTGCATGATCGGATGCCCGTGAT
TCTGGACCCGAATAGCGAGCAGATGAAGACTTGGCTGGACCCCTCTAGGA
CGGAGTGGTCGAAAGAGCTGCAGTCGATCCTCAAGCCATATGAGGGCGAG
CTGGAGTGTTATCCTGTGCCGAAAGAGGTGGGGAAGGTGGGAAATAATTC
TCCTGATTTTATAGTTCCGGTTAGTAGTAAGGAGAATAAGAGCAATATTG
CGAACTTTCTTGCCAATGCGAAGAAGGGTGCTGCGGTGAAGGTGGAAGAA
GGAGTGAAGGATGAGAGGCCCACGAAAGATGCTGAATGGAGCGAGGATAA
TGCCCCCAAGCCGGTTTCTGGAGTCAAGAGGGAACATTCGCCTGATGTCG
AGACGGAAGATACTAAGTTGCAGAAAACGGAGCCGAGTGTAGCTTCATCG
CCGAAGAAGAGCCCGGAGATGAGTTCACCATCTAAGCCTGAGACGCCAGC
AGGGAAGAAGACGCGCAGTGCCACGCATAATAAGCCGATGAAGAAGAGTC
CGCAGAAGCAGCCCCCTGCAGGGACTCAGCGAATTACGAACTTTTTCGGG
AAGTAACGCATGAGCTTCATCCGCCGCCGTCTCCAAGACCAAGGCCTCCA
AGTCGACGACGCACCCCCCGATGAAGACGTCCGCGAAACCTACAACTTCG
CTCCAGGGAACAGCGGCGCTGTTTACCTTGCTGATACGCATATGTACCCG
TCTTCTCATCAGCATGATGAGCCAGCTAGTCAACCTGACACCGAAAAAGA
GACAGCAGAAGGAGAGGAAACAGGGGGAGAAAAGAAGAGCAATGCCACCA
AATACAAGCTCCACAGCATGCGCTGGGGTCTGATTCCCTTCTGGACGAAA
CGCAATCCCGACTACGGAAGTATTATGCGCACAATCAACTGCCGAGATGA
CTCACTAATCGAGGACCGGGGCCTATGGACGTCCATGAAGCGGAGGAAGC
GGTGCGTGGTGGTGTGTCAGGGGTTCTATGAGTGGTTGAAGAAAGGACCA
GGGGGGAAAGAGAAGGTTCCGCATTTCGTGAAGAGGAAGGATGGCGATTT
GATGTATTTTGCGGGGTTGTGGGATAGTGTTAAGTATGAAGATGTGTGGA
CGATACGCTTTAGGCGTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003697single-stranded DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0018142protein-DNA covalent cross-linking
GO:0006974cellular response to DNA damage stimulus
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010639KJC3_010639Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010639-T1KJC3_010639-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010639-T1.cdsKJC3_010639-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010639-T1.exon3KJC3_010639-T1.exon3Aspergillus niger KJC3exon
KJC3_010639-T1.exon2KJC3_010639-T1.exon2Aspergillus niger KJC3exon
KJC3_010639-T1.exon1KJC3_010639-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010639-T1.utr5p1KJC3_010639-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR003738
DBxrefInterPro:IPR036590
DBxrefPFAM:PF02586
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3946991..3948492 -
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