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KJC3_010640-T1, KJC3_010640-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010640-T1
Unique NameKJC3_010640-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3949513..3951497-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010640-T1 ID=KJC3_010640-T1|Name=KJC3_010640-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1985bp|location=Sequence derived from alignment at ch7:3949513..3951497- (Aspergillus niger KJC3)
GTCAACGACAATTGCTCCGCCCGCGTTCATCCCTCTCTCCTCCCAGACTC
CCAACATGGCTGAGCAGCTCGTCCTTCGCGGTACCCTTGAGGGTCACAAT
GGCTGGGTTACCTGCCTGGCTACCTCTCTGGAGAAGTAAGGCAACACTAC
ACTACACCGAATTGAAGACATGAAACAAATGCGTTTTGTTGCGAAAATCG
AACAAGGTGTGCATGTGCTACCGAACAAGTGGTATATGGATGCATTGTTG
CGAGAAAAGAAAATGATCGCATTGGTTGAAACATGAAATATTCATATATC
AAATGGACAAAACTGGGTTCTGACTTTATGTTTTTCTTCCTCGATTATAG
CCCCAACATGCTGCTCTCTGGCAGTCGCGACAAGACCCTGATCATCTGGA
ACCTGACCCGCGACGAGCAGGCCTACGGTTACCCCAAGCGCAGCCTTGAG
GGTCACTCTCACATCGTCTCTGACTGTGTATGCCCTCCGAATTACTCCGT
CCCCACCATGTCCCAGTCCAGACAAGAAAAGACTTTCCCCACAGACGAAG
GACGAAGCCCGATCGAAACCTACGAGAAGGCGGGACTGGGCAAAGAATAA
AAAGGAAGATGATTTGGCTGACCGTGCATGGGGATTTATAGGTGATCTCC
TCCGACGGTGCCTACGCTCTGTCCTCCTCCTGGGACAAGTCCCTCCGCCT
GTGGGAGCTCTCCACTGGTGAGACCACCCGGACCTTCGTCGGCCACACCA
ACGACGTCCTCTCCGTTTCTTTCTCCGCCGACAACCGCCAGATTGTCTCC
GCTTCCCGTGACCGCTCCATCAAGCTCTGGAACACCCTTGGTGACTGCAA
GTTCACCATCACCGACAAGGGCCACACCGAGTGGGTTTCCTGCGTTCGCT
TCAGCCCCAACCCCCAGAACCCCGTCATCGTCTCCGCTGGTTGGGACAAG
CTCGTCAAGGTACGTTATGACTCGACTCTCGCATACCCAAGTTTATATCA
TTCGCAATCTCGACACGTCCAGAAGATGTTTTTGCATAAACGTATTTGCT
ACTTCAGAGCCTTTCACGGCCATGAGACAAACATTCACCAATGCCCTGAT
GGACAATCGATAAACATATCTTGTTTATGTTGTTATTGCTTTTATTGCTT
TTCCACCGAGAACTTCAACTTGAAGAATCTTATTTCTGTGGAGTCATGAA
GCTAACATGCAAAACAACTAGGTTTGGGAGCTCGCTTCCTGCCGTCTCCA
GACCGACCACATCGGTCACACCGGCTACATCAACGCCGTCACCATCTCCC
CCGATGGATCCCTCTGCGCCTCCGGTGGCAAGGACGGCACCACCATGCTC
TGGGACCTTAACGAGTCCAAGCACCTCTACTCCCTCCACGCCGGTGACGA
GATCCACGCCCTCGTCTTCTCCCCCAACCGTTACTGGCTCTGCGCTGCCA
CCTCCAGCAGCATCACCATCTTCGACCTCGAGAAGAAGAGCAAGGTTGAC
GAGCTCAAGCCCGAGTACATCGAGAAGGGCAAGAAGAGCCGCGAGCCCGA
GTGTGTCAGCTTGGCCTGGAGCGCTGACGGCCAGACTCTGTTCGCTGGTT
ACACCGACAACAAGATCCGCGCTTGGGGTGTCATGTCGAGGGCATAGATT
GATACCCATCAAGTAATCACGGGACGGTGTTGAGTTTTAGCGGAGGAGAG
AAATCAAATAACAAAGATATCTGTTTTTTATTTTTTCCTTTTCCAAACAA
CAAAAAGGGCAGGCATTGGTTGGGATGTATGAGCCATGAGCAATGAAAGC
ACCTCGGAGGGAGGGGCATTTCTCCCCATTCCTCCCGGGTTTTCACCTTG
AACATGTCTAGCTTACTCGAGATTTCGTTTCATAAAATCCGAATTGTCTG
GAATCTTGTGAAAGGGATGACATGCAAAATGTTCTAATACCATTTTAAAA
GACTGTTAAAAAGTTACCCTATCACCGTCGGAGAC
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Coding sequence (CDS) from alignment at ch7:3949513..3951497-

>KJC3_010640-T1 ID=KJC3_010640-T1|Name=KJC3_010640-T1|organism=Aspergillus niger KJC3|type=CDS|length=3804bp|location=Sequence derived from alignment at ch7:3949513..3951497- (Aspergillus niger KJC3)
GTTTGGGAGCTCGCTTCCTGCCGTCTCCAGACCGACCACATCGGTCACAC
CGGCTACATCAACGCCGTCACCATCTCCCCCGATGGATCCCTCTGCGCCT
CCGGTGGCAAGGACGGCACCACCATGCTCTGGGACCTTAACGAGTCCAAG
CACCTCTACTCCCTCCACGCCGGTGACGAGATCCACGCCCTCGTCTTCTC
CCCCAACCGTTACTGGCTCTGCGCTGCCACCTCCAGCAGCATCACCATCT
TCGACCTCGAGAAGAAGAGCAAGGTTGACGAGCTCAAGCCCGAGTACATC
GAGAAGGGCAAGAAGAGCCGCGAGCCCGAGTGTGTCAGCTTGGCCTGGAG
CGCTGACGGCCAGACTCTGTTCGCTGGTTACACCGACAACAAGATCCGCG
CTTGGGGTGTCATGTCGAGGGCATAGGTGATCTCCTCCGACGGTGCCTAC
GCTCTGTCCTCCTCCTGGGACAAGTCCCTCCGCCTGTGGGAGCTCTCCAC
TGGTGAGACCACCCGGACCTTCGTCGGCCACACCAACGACGTCCTCTCCG
TTTCTTTCTCCGCCGACAACCGCCAGATTGTCTCCGCTTCCCGTGACCGC
TCCATCAAGCTCTGGAACACCCTTGGTGACTGCAAGTTCACCATCACCGA
CAAGGGCCACACCGAGTGGGTTTCCTGCGTTCGCTTCAGCCCCAACCCCC
AGAACCCCGTCATCGTCTCCGCTGGTTGGGACAAGCTCGTCAAGCCCCAA
CATGCTGCTCTCTGGCAGTCGCGACAAGACCCTGATCATCTGGAACCTGA
CCCGCGACGAGCAGGCCTACGGTTACCCCAAGCGCAGCCTTGAGGGTCAC
TCTCACATCGTCTCTGACTGTATGGCTGAGCAGCTCGTCCTTCGCGGTAC
CCTTGAGGGTCACAATGGCTGGGTTACCTGCCTGGCTACCTCTCTGGAGA
AGTTTGGGAGCTCGCTTCCTGCCGTCTCCAGACCGACCACATCGGTCACA
CCGGCTACATCAACGCCGTCACCATCTCCCCCGATGGATCCCTCTGCGCC
TCCGGTGGCAAGGACGGCACCACCATGCTCTGGGACCTTAACGAGTCCAA
GCACCTCTACTCCCTCCACGCCGGTGACGAGATCCACGCCCTCGTCTTCT
CCCCCAACCGTTACTGGCTCTGCGCTGCCACCTCCAGCAGCATCACCATC
TTCGACCTCGAGAAGAAGAGCAAGGTTGACGAGCTCAAGCCCGAGTACAT
CGAGAAGGGCAAGAAGAGCCGCGAGCCCGAGTGTGTCAGCTTGGCCTGGA
GCGCTGACGGCCAGACTCTGTTCGCTGGTTACACCGACAACAAGATCCGC
GCTTGGGGTGTCATGTCGAGGGCATAGGTGATCTCCTCCGACGGTGCCTA
CGCTCTGTCCTCCTCCTGGGACAAGTCCCTCCGCCTGTGGGAGCTCTCCA
CTGGTGAGACCACCCGGACCTTCGTCGGCCACACCAACGACGTCCTCTCC
GTTTCTTTCTCCGCCGACAACCGCCAGATTGTCTCCGCTTCCCGTGACCG
CTCCATCAAGCTCTGGAACACCCTTGGTGACTGCAAGTTCACCATCACCG
ACAAGGGCCACACCGAGTGGGTTTCCTGCGTTCGCTTCAGCCCCAACCCC
CAGAACCCCGTCATCGTCTCCGCTGGTTGGGACAAGCTCGTCAAGCCCCA
ACATGCTGCTCTCTGGCAGTCGCGACAAGACCCTGATCATCTGGAACCTG
ACCCGCGACGAGCAGGCCTACGGTTACCCCAAGCGCAGCCTTGAGGGTCA
CTCTCACATCGTCTCTGACTGTATGGCTGAGCAGCTCGTCCTTCGCGGTA
CCCTTGAGGGTCACAATGGCTGGGTTACCTGCCTGGCTACCTCTCTGGAG
AAGTTTGGGAGCTCGCTTCCTGCCGTCTCCAGACCGACCACATCGGTCAC
ACCGGCTACATCAACGCCGTCACCATCTCCCCCGATGGATCCCTCTGCGC
CTCCGGTGGCAAGGACGGCACCACCATGCTCTGGGACCTTAACGAGTCCA
AGCACCTCTACTCCCTCCACGCCGGTGACGAGATCCACGCCCTCGTCTTC
TCCCCCAACCGTTACTGGCTCTGCGCTGCCACCTCCAGCAGCATCACCAT
CTTCGACCTCGAGAAGAAGAGCAAGGTTGACGAGCTCAAGCCCGAGTACA
TCGAGAAGGGCAAGAAGAGCCGCGAGCCCGAGTGTGTCAGCTTGGCCTGG
AGCGCTGACGGCCAGACTCTGTTCGCTGGTTACACCGACAACAAGATCCG
CGCTTGGGGTGTCATGTCGAGGGCATAGGTGATCTCCTCCGACGGTGCCT
ACGCTCTGTCCTCCTCCTGGGACAAGTCCCTCCGCCTGTGGGAGCTCTCC
ACTGGTGAGACCACCCGGACCTTCGTCGGCCACACCAACGACGTCCTCTC
CGTTTCTTTCTCCGCCGACAACCGCCAGATTGTCTCCGCTTCCCGTGACC
GCTCCATCAAGCTCTGGAACACCCTTGGTGACTGCAAGTTCACCATCACC
GACAAGGGCCACACCGAGTGGGTTTCCTGCGTTCGCTTCAGCCCCAACCC
CCAGAACCCCGTCATCGTCTCCGCTGGTTGGGACAAGCTCGTCAAGCCCC
AACATGCTGCTCTCTGGCAGTCGCGACAAGACCCTGATCATCTGGAACCT
GACCCGCGACGAGCAGGCCTACGGTTACCCCAAGCGCAGCCTTGAGGGTC
ACTCTCACATCGTCTCTGACTGTATGGCTGAGCAGCTCGTCCTTCGCGGT
ACCCTTGAGGGTCACAATGGCTGGGTTACCTGCCTGGCTACCTCTCTGGA
GAAGTTTGGGAGCTCGCTTCCTGCCGTCTCCAGACCGACCACATCGGTCA
CACCGGCTACATCAACGCCGTCACCATCTCCCCCGATGGATCCCTCTGCG
CCTCCGGTGGCAAGGACGGCACCACCATGCTCTGGGACCTTAACGAGTCC
AAGCACCTCTACTCCCTCCACGCCGGTGACGAGATCCACGCCCTCGTCTT
CTCCCCCAACCGTTACTGGCTCTGCGCTGCCACCTCCAGCAGCATCACCA
TCTTCGACCTCGAGAAGAAGAGCAAGGTTGACGAGCTCAAGCCCGAGTAC
ATCGAGAAGGGCAAGAAGAGCCGCGAGCCCGAGTGTGTCAGCTTGGCCTG
GAGCGCTGACGGCCAGACTCTGTTCGCTGGTTACACCGACAACAAGATCC
GCGCTTGGGGTGTCATGTCGAGGGCATAGGTGATCTCCTCCGACGGTGCC
TACGCTCTGTCCTCCTCCTGGGACAAGTCCCTCCGCCTGTGGGAGCTCTC
CACTGGTGAGACCACCCGGACCTTCGTCGGCCACACCAACGACGTCCTCT
CCGTTTCTTTCTCCGCCGACAACCGCCAGATTGTCTCCGCTTCCCGTGAC
CGCTCCATCAAGCTCTGGAACACCCTTGGTGACTGCAAGTTCACCATCAC
CGACAAGGGCCACACCGAGTGGGTTTCCTGCGTTCGCTTCAGCCCCAACC
CCCAGAACCCCGTCATCGTCTCCGCTGGTTGGGACAAGCTCGTCAAGCCC
CAACATGCTGCTCTCTGGCAGTCGCGACAAGACCCTGATCATCTGGAACC
TGACCCGCGACGAGCAGGCCTACGGTTACCCCAAGCGCAGCCTTGAGGGT
CACTCTCACATCGTCTCTGACTGTATGGCTGAGCAGCTCGTCCTTCGCGG
TACCCTTGAGGGTCACAATGGCTGGGTTACCTGCCTGGCTACCTCTCTGG
AGAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CPC2KJC3_010640Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010640-T1KJC3_010640-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010640-T1.cdsKJC3_010640-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010640-T1.utr3p1KJC3_010640-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010640-T1.exon4KJC3_010640-T1.exon4Aspergillus niger KJC3exon
KJC3_010640-T1.exon3KJC3_010640-T1.exon3Aspergillus niger KJC3exon
KJC3_010640-T1.exon2KJC3_010640-T1.exon2Aspergillus niger KJC3exon
KJC3_010640-T1.exon1KJC3_010640-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010640-T1.utr5p1KJC3_010640-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092636T6
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
Productcross-pathway control WD-repeat protein cpc2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3949513..3951497 -
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