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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3972810..3975332+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010648-T1 ID=KJC3_010648-T1|Name=KJC3_010648-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2523bp|location=Sequence derived from alignment at ch7:3972810..3975332+ (Aspergillus niger KJC3)
CCTTGCGCCCTCCAACTTTGGCTTCGTTGCTTTTGTTTTGTCTCTGCCTC
TTCGGTTAATTCTCTGCATTGATCCCTCATAATCCCCGGTGATCTGTCTT
CTCATCTCCTCCCCTTCCAGTTCATCCAGACCCTGATTGATCTTCCGGTT
CATCCGCCCTCACATAAGCCTCGTCCCCCTCCTGAACCCCTGTGACGTAC
TGCCGGTTCGTCCCACCGGAAGCCACTATAAACACCCACTCCCCCTATTT
ATTTCGTATTTTTTTTGCGCCCAAGCTACCTAACAGTCCTATAAATTCGT
CTGCATGTCCCAGACACTCTGATTGAGACGGCTCGAATTTCAATATGGCC
TCCGTCACTTCGCTTGACAAGGACTTGCGCAGTCTGCGCTTGTCCCGCTA
TACCCCGCAGGCAGCTGCGGAAGTCCGCGACTGGATTGAAGAAGTGTTAC
ACGAAAAACTCCAGCCAGGAGATCTCCTGGATGCTTTGAAAGATGGCGTT
GCACTCTGCAGGTGAGATGAGGACTATTCTGTGTCGATCTGGGGGCGTTC
ATGGACACTAACAATGTTGCAGGCTAGTCAACTTGGCCGTCTCCCCCGGC
GTCAAGTACAAGCAGTCCTCGATGCCCTTCGTGCAGATGGAGAACATCTC
TCACTTCCTTCGCGCATGCCAAATGCAGCCCATCAGCCTCCCTCCGCACG
ATGTTTTCCTGACCGTCGATCTCTACGAAGCCAAGGACCCCGCACAGGTC
CTACAATGTCTCACATCTTTCAGCCGCCGGGCCAATGCTCTCCAGCCTAG
CAAGTTCCCTCGCGCACTCGGCCCTCAAAGCAAGGCAGCCACTCTGAGCC
CGCATGCCACCGGTTCCAGCCAAGGCGCTTACACCCCCACCAAATCGAGT
GTATCCGGACACTCCAGCCCAGCACGATCCCCGAAGCCAGTCAGCAGCTG
GAGCAAGAAATCGGATGAGTTTGCCACGGCCCCGGCCTGGAACATTCACC
AGTACGGCTACATGGGCGGTGCCAACCAGGGCAACCAGGGCGTTGCCTTT
GGTGCTCGTCGGCAGATCACTACCGCTGCCCCGCGTGTTCCCAGCCTGGC
GGAGAAAGAAAAGCGGAGAAAGGAGGAAGAAGAACGGCAGCTTCTGGAGA
AGCAGGAAGCGGAGCGCCAGCGCCAGCAGGAACGCGAAGCTGAAGAGGAA
CGTGCACGCATCGAGGAAGAGCGCCGCTGGGAGGAGGAAACGAACCGTTT
GAGGGAGAAAGAACGGCGTCAAGTCGAAGAGGAGCGCAAGCGCTGGGACG
CGCAACAGCGCAAATGGGAAGAAGAGGAGCGGCAACGCCAGCGCGAAGAA
AAGGAAACGGAGGATAGGCTAGAGCGCGAGCGACTGCAACGGCGAGAGGC
GCAAGACAGCCGTCTCAACGGACAGTTCCTCAGCCAATACCAAGCCAGTC
TACCAACAGCATCTCCCGTTCCCCCAGTCTCCAGCGAAAACCGCGAGAGA
CAACGCATCCGCGAACTCGAGCGCGAGCTAGAACGCGCCAAGGAGAGAGA
ACGCCAATACGAGCGCGAACGTCAAGACATCCAAGAACGGGCAACCAAAT
CGCCGCCTCGCAGCCCCCGCCCAGCCCAGCCCAGCTACGACCTGTCCTCC
CTCGAGCAAGAACGTCGCATGCTCCGGACCGAATGGCAAAAGCACCACGA
CGAGCCACTCGCAGAATCAGACATTCCCCCAAGCATGCCTCCCCGACCCC
TCCCTGAGCCCGTCATCGCCGCCGGGGACAAACCACCTACGCCCCCTCGC
CCCTTGCCCGACCCCACCGAAGCGAAGCCCCCTATGCCTCCACGACCCCT
CCCCGATCCCACAAGCTACACCTCTCCACCCCAAAGCCCCTACACACAAG
AGAGCCGTGTCGACCGATTCCTCGCATCCAACCGGCCCCCTGTTGCCCCG
AAGCCCGTTGCCCACCGGCCCCAAGACTACACAACCACTGCGGAAGTAGA
CGCCGAAAATAGCCGTCGCGCCGCCGCCCAAGAGAAGACCAAGGCCGGCG
GCTGGGCCTCCAAGTCCCTCCTGGAGCGCGAGATGGAGCGCGAACGGGAA
CGTCAGCGCGAGTGGGAGGAGAATCAGCTTCAGACACAGGAGGCAGCAGC
TAGGGCTGGGTCTTCTACTGCGGGCGCTAGGCGGCAGATTATTGGGCCGA
GGCCACCTCCATAAATATAAAGTGGAGTGAGCCTTTTCATAGTTCGCCGC
GTTTAGTGTTTTCTTTTTCTACCCCCTTTATCTATTTTGTCTGCCTGTCT
GGTTTATTTTATCTCCCCTGTGTCGTGGATATACCCTTTTCATTTGCCTC
CTTTTCTCTTATCCCTTTCACGCCGCTTGGTGCGGTGGTGTGTGCAACTG
CGAAGTTTGCTTGGCATGAGTGGTTACTATATTTCTGTTCGGGAAAAAAC
ACAATAAAAATAAATCAAATGTAAATAAAAAGCAGTATTCAGCTGGAAAT
TGATAGACATTTCAAAGTTCAGA back to topCoding sequence (CDS) from alignment at ch7:3972810..3975332+ >KJC3_010648-T1 ID=KJC3_010648-T1|Name=KJC3_010648-T1|organism=Aspergillus niger KJC3|type=CDS|length=3618bp|location=Sequence derived from alignment at ch7:3972810..3975332+ (Aspergillus niger KJC3)
ATGGCCTCCGTCACTTCGCTTGACAAGGACTTGCGCAGTCTGCGCTTGTC
CCGCTATACCCCGCAGGCAGCTGCGGAAGTCCGCGACTGGATTGAAGAAG
TGTTACACGAAAAACTCCAGCCAGGAGATCTCCTGGATGCTTTGAAAGAT
GGCGTTGCACTCTGCAGGCTAGTCAACTTGGCCGTCTCCCCCGGCGTCAA
GTACAAGCAGTCCTCGATGCCCTTCGTGCAGATGGAGAACATCTCTCACT
TCCTTCGCGCATGCCAAATGCAGCCCATCAGCCTCCCTCCGCACGATGTT
TTCCTGACCGTCGATCTCTACGAAGCCAAGGACCCCGCACAGGTCCTACA
ATGTCTCACATCTTTCAGCCGCCGGGCCAATGCTCTCCAGCCTAGCAAGT
TCCCTCGCGCACTCGGCCCTCAAAGCAAGGCAGCCACTCTGAGCCCGCAT
GCCACCGGTTCCAGCCAAGGCGCTTACACCCCCACCAAATCGAGTGTATC
CGGACACTCCAGCCCAGCACGATCCCCGAAGCCAGTCAGCAGCTGGAGCA
AGAAATCGGATGAGTTTGCCACGGCCCCGGCCTGGAACATTCACCAGTAC
GGCTACATGGGCGGTGCCAACCAGGGCAACCAGGGCGTTGCCTTTGGTGC
TCGTCGGCAGATCACTACCGCTGCCCCGCGTGTTCCCAGCCTGGCGGAGA
AAGAAAAGCGGAGAAAGGAGGAAGAAGAACGGCAGCTTCTGGAGAAGCAG
GAAGCGGAGCGCCAGCGCCAGCAGGAACGCGAAGCTGAAGAGGAACGTGC
ACGCATCGAGGAAGAGCGCCGCTGGGAGGAGGAAACGAACCGTTTGAGGG
AGAAAGAACGGCGTCAAGTCGAAGAGGAGCGCAAGCGCTGGGACGCGCAA
CAGCGCAAATGGGAAGAAGAGGAGCGGCAACGCCAGCGCGAAGAAAAGGA
AACGGAGGATAGGCTAGAGCGCGAGCGACTGCAACGGCGAGAGGCGCAAG
ACAGCCGTCTCAACGGACAGTTCCTCAGCCAATACCAAGCCAGTCTACCA
ACAGCATCTCCCGTTCCCCCAGTCTCCAGCGAAAACCGCGAGAGACAACG
CATCCGCGAACTCGAGCGCGAGCTAGAACGCGCCAAGGAGAGAGAACGCC
AATACGAGCGCGAACGTCAAGACATCCAAGAACGGGCAACCAAATCGCCG
CCTCGCAGCCCCCGCCCAGCCCAGCCCAGCTACGACCTGTCCTCCCTCGA
GCAAGAACGTCGCATGCTCCGGACCGAATGGCAAAAGCACCACGACGAGC
CACTCGCAGAATCAGACATTCCCCCAAGCATGCCTCCCCGACCCCTCCCT
GAGCCCGTCATCGCCGCCGGGGACAAACCACCTACGCCCCCTCGCCCCTT
GCCCGACCCCACCGAAGCGAAGCCCCCTATGCCTCCACGACCCCTCCCCG
ATCCCACAAGCTACACCTCTCCACCCCAAAGCCCCTACACACAAGAGAGC
CGTGTCGACCGATTCCTCGCATCCAACCGGCCCCCTGTTGCCCCGAAGCC
CGTTGCCCACCGGCCCCAAGACTACACAACCACTGCGGAAGTAGACGCCG
AAAATAGCCGTCGCGCCGCCGCCCAAGAGAAGACCAAGGCCGGCGGCTGG
GCCTCCAAGTCCCTCCTGGAGCGCGAGATGGAGCGCGAACGGGAACGTCA
GCGCGAGTGGGAGGAGAATCAGCTTCAGACACAGGAGGCAGCAGCTAGGG
CTGGGTCTTCTACTGCGGGCGCTAGGCGGCAGATTATTGGGCCGAGGCCA
CCTCCATAAATGGCCTCCGTCACTTCGCTTGACAAGGACTTGCGCAGTCT
GCGCTTGTCCCGCTATACCCCGCAGGCAGCTGCGGAAGTCCGCGACTGGA
TTGAAGAAGTGTTACACGAAAAACTCCAGCCAGGAGATCTCCTGGATGCT
TTGAAAGATGGCGTTGCACTCTGCAGGCTAGTCAACTTGGCCGTCTCCCC
CGGCGTCAAGTACAAGCAGTCCTCGATGCCCTTCGTGCAGATGGAGAACA
TCTCTCACTTCCTTCGCGCATGCCAAATGCAGCCCATCAGCCTCCCTCCG
CACGATGTTTTCCTGACCGTCGATCTCTACGAAGCCAAGGACCCCGCACA
GGTCCTACAATGTCTCACATCTTTCAGCCGCCGGGCCAATGCTCTCCAGC
CTAGCAAGTTCCCTCGCGCACTCGGCCCTCAAAGCAAGGCAGCCACTCTG
AGCCCGCATGCCACCGGTTCCAGCCAAGGCGCTTACACCCCCACCAAATC
GAGTGTATCCGGACACTCCAGCCCAGCACGATCCCCGAAGCCAGTCAGCA
GCTGGAGCAAGAAATCGGATGAGTTTGCCACGGCCCCGGCCTGGAACATT
CACCAGTACGGCTACATGGGCGGTGCCAACCAGGGCAACCAGGGCGTTGC
CTTTGGTGCTCGTCGGCAGATCACTACCGCTGCCCCGCGTGTTCCCAGCC
TGGCGGAGAAAGAAAAGCGGAGAAAGGAGGAAGAAGAACGGCAGCTTCTG
GAGAAGCAGGAAGCGGAGCGCCAGCGCCAGCAGGAACGCGAAGCTGAAGA
GGAACGTGCACGCATCGAGGAAGAGCGCCGCTGGGAGGAGGAAACGAACC
GTTTGAGGGAGAAAGAACGGCGTCAAGTCGAAGAGGAGCGCAAGCGCTGG
GACGCGCAACAGCGCAAATGGGAAGAAGAGGAGCGGCAACGCCAGCGCGA
AGAAAAGGAAACGGAGGATAGGCTAGAGCGCGAGCGACTGCAACGGCGAG
AGGCGCAAGACAGCCGTCTCAACGGACAGTTCCTCAGCCAATACCAAGCC
AGTCTACCAACAGCATCTCCCGTTCCCCCAGTCTCCAGCGAAAACCGCGA
GAGACAACGCATCCGCGAACTCGAGCGCGAGCTAGAACGCGCCAAGGAGA
GAGAACGCCAATACGAGCGCGAACGTCAAGACATCCAAGAACGGGCAACC
AAATCGCCGCCTCGCAGCCCCCGCCCAGCCCAGCCCAGCTACGACCTGTC
CTCCCTCGAGCAAGAACGTCGCATGCTCCGGACCGAATGGCAAAAGCACC
ACGACGAGCCACTCGCAGAATCAGACATTCCCCCAAGCATGCCTCCCCGA
CCCCTCCCTGAGCCCGTCATCGCCGCCGGGGACAAACCACCTACGCCCCC
TCGCCCCTTGCCCGACCCCACCGAAGCGAAGCCCCCTATGCCTCCACGAC
CCCTCCCCGATCCCACAAGCTACACCTCTCCACCCCAAAGCCCCTACACA
CAAGAGAGCCGTGTCGACCGATTCCTCGCATCCAACCGGCCCCCTGTTGC
CCCGAAGCCCGTTGCCCACCGGCCCCAAGACTACACAACCACTGCGGAAG
TAGACGCCGAAAATAGCCGTCGCGCCGCCGCCCAAGAGAAGACCAAGGCC
GGCGGCTGGGCCTCCAAGTCCCTCCTGGAGCGCGAGATGGAGCGCGAACG
GGAACGTCAGCGCGAGTGGGAGGAGAATCAGCTTCAGACACAGGAGGCAG
CAGCTAGGGCTGGGTCTTCTACTGCGGGCGCTAGGCGGCAGATTATTGGG
CCGAGGCCACCTCCATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010648-T1.utr5p1 | KJC3_010648-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010648-T1.utr3p1 | KJC3_010648-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036872 |
| DBxref | InterPro:IPR001715 |
| DBxref | PFAM:PF00307 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3972810..3975332 + |
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