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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3975326..3977591- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010649-T1 ID=KJC3_010649-T1|Name=KJC3_010649-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2266bp|location=Sequence derived from alignment at ch7:3975326..3977591- (Aspergillus niger KJC3)
CCATCTCCTCATTCATCTTGTCCACACCCTCTTCGATTCTCTACCTCTCC
CTCCACTTCTGTCTTCTATGGCAGCTCTAGAACATCCAGAGGCAGACTTG
CCTATTTATCGTTCCCCCAAACCAGTCCCCTTTGAGCTAGCCCAACATGC
AGCCATCTTCTTCGAAGAGCGACTCTGTCCGTCCCCTCCGCATCGCTATT
TCTTCTTTGTCCACATCTGACCTCTCTGTTTAGATACGCAAGCTCTCAAT
TTCCTCCTGAATATCCTCACATCCGGTACCGTTGCCTCAGCGCCAGTATA
TACTCCACCCGTCCAGCAACTCGCCCTAGCCGCAACTCTCCTCATACACC
CTTCCACCACCACGCGCGCAAAAACAACTGAGGAGGAAGAAGCACCCCTG
GCCGCTTTACGTCTGCTTCGACTGACCAAAACCCTCGTCGGACCCATCTC
TTCGAAACTCAGCGTCGCATTCTCTTTCAACAAATCTGACTTCCCCCGCC
ATACAAGACGACGTCCTGTGGCAGAAAACATCCCCCCTCCCTCGGATCTA
TCTTCCGAGGACACGAAACCCTTGAACTTAGATCTCGGCCAGTCGCTTTC
CTTGTGGTCCAACGCAGAAGACTTCTGGCATGTCGTTGGTTGGGCGTTCA
ACTGTTCTGTTCGCCATCGCCCCCGCTGGACGTGGTGGCAGGTCTGGCTT
GAATACATGTGTGATGTTCTGGAGAGTGATTGGAACGAACGGTTTCAACA
GTACAAGGAGGCTCACACCGGTAACGCCATTAGCGAACAGGGACCACCAC
CCTCCCCAAAGAAAGGTCGAAGGAAAAAAATGCATCATGACGATGACCCA
GCCCTCCACATCCTCAGAGAAAGTCTCATATTCCGTTACATTCACGGAGC
TAGCACCACATACGGTCCATACCGGCGCATTGTCCGCTCCATCTTTGCAG
ACGGTGGCTCGACCTCTCGCAATGAGTTTCGCGAAGTCTTCGACAATGAA
CTCAAATACGCACAAGCCCACACCTCCACCAGCAGAAAGCGCAGTGCACA
GGTCAACATCGATGAGAACGAGTTCGGCGACTACCTCACGGACGATGATC
CGGTCGAGGATGGAGAATATGACAATGAAAACAAGGACACCGACGAGACG
AACATCAATTTTGACGGGGAGGTATATCCATCTGATTCAAACACCAGCAG
GACCAAACGTGCCCGGGAGAAAGCTACCCCTCACCGGGCACCCCAGCCCA
AGCGCAGAGGCAAATCACTAGCTCTTGGCCCCAACGGCATCAACACACCC
CCCGGCCCATACGGCGGCTCTGCCCCAAGCGGCAAATCTGGCGCTCGTGT
ACCCATCGAAGAGCTCCCAACCAAACACATCCCCTACATGCACGGCGACG
TCGGCTTTTACGGAGGCATGCGCTCGCTCGGTCTCCGACAACGACTCCTA
CAACTCCTCTCAACCGTCTCCCAATACCTCCCCGACGACTTCATCCCCCT
CGAAGACCTTTACCATCTTTACGCCGAAAACATCCGTCACCTGCCCCTCC
CCGTCTTCCAAGCCTTCATCAGCCCCTCCACCCTCCCCTACCTCTCCGGG
CCTGCCAAAACCACCCTCTGCGAATTCCTCCTTTTTCGCATGCGCGAGTC
CGCCGCCCTCGACAGCGACGAGGAATATCTCAACCAAGCCAAACTCGAAC
AATGTTTTCTACCCTACGCGGCCAGCACAAAGTCCATAGCTGATAACACC
AAGGTCTCCATTGCCCTGGAGTCACTGATCATCCTCCTCGCAGATAATGG
CATGCTAAGCGTCACGAAGAGTCTGCGAGAAGCAGTTCATAAGGGCGTTA
ATCGCCGGTTCGACCGGTCCGAATACCAATCGAAGAAATATGTTCAGGAG
GCCTATAGGTGGGCGGATGATATCGAGCGAGCATGGCTAGAGGAGAGTGC
GGAGCGATTGTATTTCCTCGTGCAGATCATTCTGCCCTTCGAGGGTAATG
CCACTGCTGCATGATGCTTGTCCCATGAGGTACTAAGATGTTTTCTTTTT
CTTCATTTCTCTCATTTGCATGCGTATATGTGATCGGAGTGAGCGATTCA
AAAGCAAGCGCGTCATGTCTTTTTTTTCCTTGTCTGGATATGATTTTTGC
CTCGCTCATCGGTTATATACTGTCTTGAGACAGCTTTCGGCTATGTTTTA
TTGATGTATAGATAGTATAAATACCCTTTGCTAATTGAATCTACGAATCT
GAATCTGGATCTGAAC back to topCoding sequence (CDS) from alignment at ch7:3975326..3977591- >KJC3_010649-T1 ID=KJC3_010649-T1|Name=KJC3_010649-T1|organism=Aspergillus niger KJC3|type=CDS|length=3780bp|location=Sequence derived from alignment at ch7:3975326..3977591- (Aspergillus niger KJC3)
ATACGCAAGCTCTCAATTTCCTCCTGAATATCCTCACATCCGGTACCGTT
GCCTCAGCGCCAGTATATACTCCACCCGTCCAGCAACTCGCCCTAGCCGC
AACTCTCCTCATACACCCTTCCACCACCACGCGCGCAAAAACAACTGAGG
AGGAAGAAGCACCCCTGGCCGCTTTACGTCTGCTTCGACTGACCAAAACC
CTCGTCGGACCCATCTCTTCGAAACTCAGCGTCGCATTCTCTTTCAACAA
ATCTGACTTCCCCCGCCATACAAGACGACGTCCTGTGGCAGAAAACATCC
CCCCTCCCTCGGATCTATCTTCCGAGGACACGAAACCCTTGAACTTAGAT
CTCGGCCAGTCGCTTTCCTTGTGGTCCAACGCAGAAGACTTCTGGCATGT
CGTTGGTTGGGCGTTCAACTGTTCTGTTCGCCATCGCCCCCGCTGGACGT
GGTGGCAGGTCTGGCTTGAATACATGTGTGATGTTCTGGAGAGTGATTGG
AACGAACGGTTTCAACAGTACAAGGAGGCTCACACCGGTAACGCCATTAG
CGAACAGGGACCACCACCCTCCCCAAAGAAAGGTCGAAGGAAAAAAATGC
ATCATGACGATGACCCAGCCCTCCACATCCTCAGAGAAAGTCTCATATTC
CGTTACATTCACGGAGCTAGCACCACATACGGTCCATACCGGCGCATTGT
CCGCTCCATCTTTGCAGACGGTGGCTCGACCTCTCGCAATGAGTTTCGCG
AAGTCTTCGACAATGAACTCAAATACGCACAAGCCCACACCTCCACCAGC
AGAAAGCGCAGTGCACAGGTCAACATCGATGAGAACGAGTTCGGCGACTA
CCTCACGGACGATGATCCGGTCGAGGATGGAGAATATGACAATGAAAACA
AGGACACCGACGAGACGAACATCAATTTTGACGGGGAGGTATATCCATCT
GATTCAAACACCAGCAGGACCAAACGTGCCCGGGAGAAAGCTACCCCTCA
CCGGGCACCCCAGCCCAAGCGCAGAGGCAAATCACTAGCTCTTGGCCCCA
ACGGCATCAACACACCCCCCGGCCCATACGGCGGCTCTGCCCCAAGCGGC
AAATCTGGCGCTCGTGTACCCATCGAAGAGCTCCCAACCAAACACATCCC
CTACATGCACGGCGACGTCGGCTTTTACGGAGGCATGCGCTCGCTCGGTC
TCCGACAACGACTCCTACAACTCCTCTCAACCGTCTCCCAATACCTCCCC
GACGACTTCATCCCCCTCGAAGACCTTTACCATCTTTACGCCGAAAACAT
CCGTCACCTGCCCCTCCCCGTCTTCCAAGCCTTCATCAGCCCCTCCACCC
TCCCCTACCTCTCCGGGCCTGCCAAAACCACCCTCTGCGAATTCCTCCTT
TTTCGCATGCGCGAGTCCGCCGCCCTCGACAGCGACGAGGAATATCTCAA
CCAAGCCAAACTCGAACAATGTTTTCTACCCTACGCGGCCAGCACAAAGT
CCATAGCTGATAACACCAAGGTCTCCATTGCCCTGGAGTCACTGATCATC
CTCCTCGCAGATAATGGCATGCTAAGCGTCACGAAGAGTCTGCGAGAAGC
AGTTCATAAGGGCGTTAATCGCCGGTTCGACCGGTCCGAATACCAATCGA
AGAAATATGTTCAGGAGGCCTATAGGTGGGCGGATGATATCGAGCGAGCA
TGGCTAGAGGAGAGTGCGGAGCGATTGTATTTCCTCGTGCAGATCATTCT
GCCCTTCGAGGGTAATGCCACTGCTGCATGAATGGCAGCTCTAGAACATC
CAGAGGCAGACTTGCCTATTTATCGTTCCCCCAAACCAGTCCCCTTTGAG
CTAGCCCAACATGCAGCCATCTTCTTCGAAGAGCGACTCTATACGCAAGC
TCTCAATTTCCTCCTGAATATCCTCACATCCGGTACCGTTGCCTCAGCGC
CAGTATATACTCCACCCGTCCAGCAACTCGCCCTAGCCGCAACTCTCCTC
ATACACCCTTCCACCACCACGCGCGCAAAAACAACTGAGGAGGAAGAAGC
ACCCCTGGCCGCTTTACGTCTGCTTCGACTGACCAAAACCCTCGTCGGAC
CCATCTCTTCGAAACTCAGCGTCGCATTCTCTTTCAACAAATCTGACTTC
CCCCGCCATACAAGACGACGTCCTGTGGCAGAAAACATCCCCCCTCCCTC
GGATCTATCTTCCGAGGACACGAAACCCTTGAACTTAGATCTCGGCCAGT
CGCTTTCCTTGTGGTCCAACGCAGAAGACTTCTGGCATGTCGTTGGTTGG
GCGTTCAACTGTTCTGTTCGCCATCGCCCCCGCTGGACGTGGTGGCAGGT
CTGGCTTGAATACATGTGTGATGTTCTGGAGAGTGATTGGAACGAACGGT
TTCAACAGTACAAGGAGGCTCACACCGGTAACGCCATTAGCGAACAGGGA
CCACCACCCTCCCCAAAGAAAGGTCGAAGGAAAAAAATGCATCATGACGA
TGACCCAGCCCTCCACATCCTCAGAGAAAGTCTCATATTCCGTTACATTC
ACGGAGCTAGCACCACATACGGTCCATACCGGCGCATTGTCCGCTCCATC
TTTGCAGACGGTGGCTCGACCTCTCGCAATGAGTTTCGCGAAGTCTTCGA
CAATGAACTCAAATACGCACAAGCCCACACCTCCACCAGCAGAAAGCGCA
GTGCACAGGTCAACATCGATGAGAACGAGTTCGGCGACTACCTCACGGAC
GATGATCCGGTCGAGGATGGAGAATATGACAATGAAAACAAGGACACCGA
CGAGACGAACATCAATTTTGACGGGGAGGTATATCCATCTGATTCAAACA
CCAGCAGGACCAAACGTGCCCGGGAGAAAGCTACCCCTCACCGGGCACCC
CAGCCCAAGCGCAGAGGCAAATCACTAGCTCTTGGCCCCAACGGCATCAA
CACACCCCCCGGCCCATACGGCGGCTCTGCCCCAAGCGGCAAATCTGGCG
CTCGTGTACCCATCGAAGAGCTCCCAACCAAACACATCCCCTACATGCAC
GGCGACGTCGGCTTTTACGGAGGCATGCGCTCGCTCGGTCTCCGACAACG
ACTCCTACAACTCCTCTCAACCGTCTCCCAATACCTCCCCGACGACTTCA
TCCCCCTCGAAGACCTTTACCATCTTTACGCCGAAAACATCCGTCACCTG
CCCCTCCCCGTCTTCCAAGCCTTCATCAGCCCCTCCACCCTCCCCTACCT
CTCCGGGCCTGCCAAAACCACCCTCTGCGAATTCCTCCTTTTTCGCATGC
GCGAGTCCGCCGCCCTCGACAGCGACGAGGAATATCTCAACCAAGCCAAA
CTCGAACAATGTTTTCTACCCTACGCGGCCAGCACAAAGTCCATAGCTGA
TAACACCAAGGTCTCCATTGCCCTGGAGTCACTGATCATCCTCCTCGCAG
ATAATGGCATGCTAAGCGTCACGAAGAGTCTGCGAGAAGCAGTTCATAAG
GGCGTTAATCGCCGGTTCGACCGGTCCGAATACCAATCGAAGAAATATGT
TCAGGAGGCCTATAGGTGGGCGGATGATATCGAGCGAGCATGGCTAGAGG
AGAGTGCGGAGCGATTGTATTTCCTCGTGCAGATCATTCTGCCCTTCGAG
GGTAATGCCACTGCTGCATGAATGGCAGCTCTAGAACATCCAGAGGCAGA
CTTGCCTATTTATCGTTCCCCCAAACCAGTCCCCTTTGAGCTAGCCCAAC
ATGCAGCCATCTTCTTCGAAGAGCGACTCT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010649-T1.utr3p1 | KJC3_010649-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010649-T1.utr5p1 | KJC3_010649-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
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| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| ch7 | supercontig | ch7:3975326..3977591 - |
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