You are here

Home

KJC3_010654-T1, KJC3_010654-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010654-T1
Unique NameKJC3_010654-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3985121..3986913-

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010654-T1 ID=KJC3_010654-T1|Name=KJC3_010654-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1793bp|location=Sequence derived from alignment at ch7:3985121..3986913- (Aspergillus niger KJC3)
TTTGTAGCCTCTTGTTCTGGCAACTGGAAATACTGAGTAAAGTGATTTCC
ATCTACAAGATCACGCGACAGTCAAACAATCATGGTAACCTAGTATGACG
AACGCCATATTTGCTACTACTCTTTCCCACTCACGTCAGCCTGAGTGGGA
GGCTGCACGAAGCTACACTTGACTGCGAAACAGAGCATCAATGGTTGGAC
TTGAAGGAAGACGCTAAGCAGAAGAGAAGTCGTAAACAGAATCTACTTCA
GACTGGCCATCAGGCTGGTTGTTCTCTCCCTCTGCAGTCATCAATAATTG
GAGGAAATCATTTATGCAAGTTGTTCAATCATTGCGTTAGTCAGGACCAC
TGCGAGCCTTCTGAGCTCCAGAAAAGATCCTGCTGCAGCATTCACTGTAG
GCAAACACCTCACTAGAGTCATTGCCTGCTACCTGATCTCTACAGATACA
AAAAACGTACGCCTCTTGATGTCCTGACAAATACTACTCGAAACACCATC
TCTCTTGCTGCCACAATGGAAATAGAACTCGACTTCTTACTGGAAGATCT
CCGTCACCCGGAGCAACGGGCAAAAAAGGCAGAGCTGGACGTCAAACATG
CGGAGCAAGTTGAGGAGGCCAGACAGGAAGTCAGACAAGCAAAGCAGCGG
GCCGCACAGGCAAAGCTTGGAGTCAAGCGAGCAAAATCGAGACACCAACA
GCTAGTGCTAGAAACCAAGCAATTAAAGCTCAAGACCAAGCAACTACAGC
TGCTAATCAAACAGGCACGACAGCAAGTTGAATCAAGCAGCCTCTTAGTT
TTTCTCGAAGAGTGTCATAAGCTTTCTCTTGCTATCTGTTTCCAAACGAA
CATGTCAAAAACATATCATGGTTCAATCGATCCTTTCGGTAGATTACGTC
CCAAGCGCATAATACCCTGGGGAGCTTTTCCCGCTTTCCAGCAGGCCATG
TGTAAGGCTATCGATGACGAAGATCCAGAATTCTCCACACATCGCGCTTT
CGCGTCCGAGAATCAATTTGAGTTCATTGGCAATGGTTCTACCCGACCTA
TAGCATCCGAATCTCATCTTCAATCCTTCCAACGTGAGACCGTGGATAAT
CATGTACAATCCATTCTTGTTGAGATGAACAACGAGAGACTGCGTCAGCG
TTTCAACATTCACGGATATGTTAGGTCTGCACATGAGGACAACTATAACA
ATGCGTTTTACATCCATGTAGAGTCGGATGAGCAAGAAGTCCCTCTGTAT
GCTGTTGAATACCAAACCCCGCACGTGCTATCAATGTCTGAGATTATTGC
TGGCCTTCATGTGATGCATCTGGATGATGACTTCATTGACAATAATGGTG
GTAGCTTCGACAAGCATGCAACCTGGGTTGTGGCAGCAGTAATCACGCAG
TTATTCTCCAATATGGCCAATATTGGAGTTCAATATGGCTATATCTACAC
CGGGGAGGCCTTCATCTGTCTTCATATCACAGAAGACCCGTCAGTGGTGC
AATACTATCTGCTTATCCCCAATTTAGACGTCACTGATGGAGATGAGTTT
CGGCAACGCACAGCAGTTGCTCATGTTCTCGCCTTGACCCTGAACACCAT
GCAAGCTAGTCCACCACCGCAGTCATGGTACGATGCAGCTGAGCAACTGG
TCGAATGGGAAATTAACTACCCTGATCCTGACTACCCTGATCCCTTAGAA
CACATACCAGAATCGGTCCGCAAAAACCTACTGCCACAATACAACTCACC
ATCTTGGAAATCTATTGAGGAACTCCCTTCTATTCCGCTATAA
back to top

Coding sequence (CDS) from alignment at ch7:3985121..3986913-

>KJC3_010654-T1 ID=KJC3_010654-T1|Name=KJC3_010654-T1|organism=Aspergillus niger KJC3|type=CDS|length=1278bp|location=Sequence derived from alignment at ch7:3985121..3986913- (Aspergillus niger KJC3)
ATGGAAATAGAACTCGACTTCTTACTGGAAGATCTCCGTCACCCGGAGCA
ACGGGCAAAAAAGGCAGAGCTGGACGTCAAACATGCGGAGCAAGTTGAGG
AGGCCAGACAGGAAGTCAGACAAGCAAAGCAGCGGGCCGCACAGGCAAAG
CTTGGAGTCAAGCGAGCAAAATCGAGACACCAACAGCTAGTGCTAGAAAC
CAAGCAATTAAAGCTCAAGACCAAGCAACTACAGCTGCTAATCAAACAGG
CACGACAGCAAGTTGAATCAAGCAGCCTCTTAGTTTTTCTCGAAGAGTGT
CATAAGCTTTCTCTTGCTATCTGTTTCCAAACGAACATGTCAAAAACATA
TCATGGTTCAATCGATCCTTTCGGTAGATTACGTCCCAAGCGCATAATAC
CCTGGGGAGCTTTTCCCGCTTTCCAGCAGGCCATGTGTAAGGCTATCGAT
GACGAAGATCCAGAATTCTCCACACATCGCGCTTTCGCGTCCGAGAATCA
ATTTGAGTTCATTGGCAATGGTTCTACCCGACCTATAGCATCCGAATCTC
ATCTTCAATCCTTCCAACGTGAGACCGTGGATAATCATGTACAATCCATT
CTTGTTGAGATGAACAACGAGAGACTGCGTCAGCGTTTCAACATTCACGG
ATATGTTAGGTCTGCACATGAGGACAACTATAACAATGCGTTTTACATCC
ATGTAGAGTCGGATGAGCAAGAAGTCCCTCTGTATGCTGTTGAATACCAA
ACCCCGCACGTGCTATCAATGTCTGAGATTATTGCTGGCCTTCATGTGAT
GCATCTGGATGATGACTTCATTGACAATAATGGTGGTAGCTTCGACAAGC
ATGCAACCTGGGTTGTGGCAGCAGTAATCACGCAGTTATTCTCCAATATG
GCCAATATTGGAGTTCAATATGGCTATATCTACACCGGGGAGGCCTTCAT
CTGTCTTCATATCACAGAAGACCCGTCAGTGGTGCAATACTATCTGCTTA
TCCCCAATTTAGACGTCACTGATGGAGATGAGTTTCGGCAACGCACAGCA
GTTGCTCATGTTCTCGCCTTGACCCTGAACACCATGCAAGCTAGTCCACC
ACCGCAGTCATGGTACGATGCAGCTGAGCAACTGGTCGAATGGGAAATTA
ACTACCCTGATCCTGACTACCCTGATCCCTTAGAACACATACCAGAATCG
GTCCGCAAAAACCTACTGCCACAATACAACTCACCATCTTGGAAATCTAT
TGAGGAACTCCCTTCTATTCCGCTATAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010654KJC3_010654Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010654-T1.cdsKJC3_010654-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010654-T1.exon2KJC3_010654-T1.exon2Aspergillus niger KJC3exon
KJC3_010654-T1.exon1KJC3_010654-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010654-T1.utr5p2KJC3_010654-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_010654-T1.utr5p1KJC3_010654-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010654-T1KJC3_010654-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3985121..3986913 -
Powered by Drupal