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KJC3_010665-T1, KJC3_010665-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010665-T1
Unique NameKJC3_010665-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:4026759..4028907-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010665-T1 ID=KJC3_010665-T1|Name=KJC3_010665-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2149bp|location=Sequence derived from alignment at ch7:4026759..4028907- (Aspergillus niger KJC3)
GGTCTGTGCTTCCCATTCCTCGACCCCAAAAACATACGCGCAGAACAACC
CGCAGCTATCCTTCCCTCCGGCCTGGCTTGCTCTACTTTGTGACCTTGCA
GAAGAGCAATCGAGCTCCAGCACTTCACAGAGAAAAGTCCTGCGACATCG
TTCGAGTTCCGCGTCCTCGCCCAGCAACCGACCAGGCCGCGGGGCCTCTC
CGTGCCTTTGACGACAACAAAACACCCGCGCCCTTCGATCTCTCCTCCCT
CTTCCCCGATCCCCAATCCCCAACATTCTCCCCACGCAATGGCAGAGGCC
ACCCTCCACAACGCTCCGATCGTCATTGACAATGGCAGCGGGACCATCCG
CGCTGGCTTTGCCGGTGAAGAGATCCCCTCCTGCTACTTCCCCTCGTTCG
TGGGCCGGCCCAAACATCCGCGGGTGATGGCCGGCGGTCTCGAAGGCGAC
GTCTTTATCGGACAACGAGCTCAGGAATTGCGCGGCTTGCTCAAGATTCG
TTACCCTCTGGAACATGGAATTGTAACAGACTGGGATGATATGGAGAAAA
TCTGGCACTACGTGTACGAGAACGAGCTGAAAACGCTGCCGGAGGAACAC
CCCGTGCTCCTGACTGAGCCACCGCTCAACCCACGCAAGAACCGCGACGC
TGCCGCCCAAATTATGTTCGAGACATTCAACGTTCCTGCGCTGTACACCT
CGATTCAAGCTGTGCTATCATTGTACGCGTCCGGTCGGACAACAGGTGTG
GTCCTCGATTCAGGGGATGGTGTGTCCCATGCGGTGCCAGTGTTCGAAGG
TTTCGCGATCCCGAACAGTATACGGCGGATTGATGTGGCGGGTCGGGATG
TGACGGAGCAGTTGCAACTACTGTTACGAAAGAACGGACATGTGCTGCAT
ACCAGTGCGGAGAAGGAGGTCGTCCGCATGATCAAGGAGAAGGTGTGCTA
CGTTTCGCTGGATCCGAAGCGAGAGGAGAAAGACTGGATGAATAGTTATC
ACAAGTCGGAGACGAAGTCTGTCGACTATGCGCTGCCTGATGGGCATAAG
ATCAAGGTACCTACTTCTTCTCTTAGGTTTTGCTGATCGGATTGAATGGG
GCTAATGGCAAACAATGACAGATCGGACAAGAACGCTACCGCGCCCCCGA
GATCCTCTTCGATCCGGAACTTATTGGCTTGGAGTACCCCGGTGTACATC
AAATCGTGCAGGACGCCATTACCCGCACGGATCTCGACTTGCGGAAGTCT
CTCTACCTCAATATCGTTCTGTCTGGTGGATCAACGCTGTGCAAGAATTT
CCCGGACCGGTTGATGCGCGAGATCAAGCGTCTGGCCGTGGAGGATATGA
AGATCCGAATCTCTGCTCCCGCGGAACGGAAGTACACGACATGGATCGGA
GGTGGTATTCTTGCTGGCTTGAGCACCTTCCGGAAGGTAGGTTTCTATTC
TGTCGCCCTACATCAAGGAACCTTTGACTAACTCCTTAAAACAGATGTGG
GTGAGCGCAGACGAATGGCACGAAGACCCCGAGATCATCCACCGGAAGTT
CGCCTAAAAAGTGCTTGCCTTATCGGATGACATCAATCTCAGGGACCTGC
ACGATCAACGTATCCACTTCCGCACCTGCAGCTCGCAGACTTCGCGACAG
GATCCGTTCACTGCAAGGACTGAACATGCAAGCTACTAGCTAGAAAAGAC
ATCAATGGTGATGCTCACAATGGTCAGCAGCAGCTTTTAATAGATACCCC
TCTTTTCTGTTCGCCTCGATTATTCAAGCTGCCATACCCATCTGCCACTC
ATACTACGCCTCTAACCTTCCACTATTTAACTATCTGAGGCAAGATACAT
CTTCTCTGGGTGGTTTTTAGTGTCTATCCCGCATCGGATGAGCTCACTAG
CACATCTACCTATCTTATGCTGCTTCCCTTAGCCTCTAACCATACATACC
TAGCGACATGTACTCCGACTACGAGGAAAGACATGAATCTACATTCTACT
TTGCTTTACTACTTCTACTTTTCTCCTTTTTTCCAATCATATCTCCTTAT
TTCTCGCTGATATTGCGTGCCACGCTCTGAAGTTTTGTGTACATATTGGA
TGGATAGATGAGAATATACGAGTCCTACAAACAATTTCGTCATTGTGTG
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Coding sequence (CDS) from alignment at ch7:4026759..4028907-

>KJC3_010665-T1 ID=KJC3_010665-T1|Name=KJC3_010665-T1|organism=Aspergillus niger KJC3|type=CDS|length=3438bp|location=Sequence derived from alignment at ch7:4026759..4028907- (Aspergillus niger KJC3)
ATGTGGGTGAGCGCAGACGAATGGCACGAAGACCCCGAGATCATCCACCG
GAAGTTCGCCTAAATCGGACAAGAACGCTACCGCGCCCCCGAGATCCTCT
TCGATCCGGAACTTATTGGCTTGGAGTACCCCGGTGTACATCAAATCGTG
CAGGACGCCATTACCCGCACGGATCTCGACTTGCGGAAGTCTCTCTACCT
CAATATCGTTCTGTCTGGTGGATCAACGCTGTGCAAGAATTTCCCGGACC
GGTTGATGCGCGAGATCAAGCGTCTGGCCGTGGAGGATATGAAGATCCGA
ATCTCTGCTCCCGCGGAACGGAAGTACACGACATGGATCGGAGGTGGTAT
TCTTGCTGGCTTGAGCACCTTCCGGAAGATGGCAGAGGCCACCCTCCACA
ACGCTCCGATCGTCATTGACAATGGCAGCGGGACCATCCGCGCTGGCTTT
GCCGGTGAAGAGATCCCCTCCTGCTACTTCCCCTCGTTCGTGGGCCGGCC
CAAACATCCGCGGGTGATGGCCGGCGGTCTCGAAGGCGACGTCTTTATCG
GACAACGAGCTCAGGAATTGCGCGGCTTGCTCAAGATTCGTTACCCTCTG
GAACATGGAATTGTAACAGACTGGGATGATATGGAGAAAATCTGGCACTA
CGTGTACGAGAACGAGCTGAAAACGCTGCCGGAGGAACACCCCGTGCTCC
TGACTGAGCCACCGCTCAACCCACGCAAGAACCGCGACGCTGCCGCCCAA
ATTATGTTCGAGACATTCAACGTTCCTGCGCTGTACACCTCGATTCAAGC
TGTGCTATCATTGTACGCGTCCGGTCGGACAACAGGTGTGGTCCTCGATT
CAGGGGATGGTGTGTCCCATGCGGTGCCAGTGTTCGAAGGTTTCGCGATC
CCGAACAGTATACGGCGGATTGATGTGGCGGGTCGGGATGTGACGGAGCA
GTTGCAACTACTGTTACGAAAGAACGGACATGTGCTGCATACCAGTGCGG
AGAAGGAGGTCGTCCGCATGATCAAGGAGAAGGTGTGCTACGTTTCGCTG
GATCCGAAGCGAGAGGAGAAAGACTGGATGAATAGTTATCACAAGTCGGA
GACGAAGTCTGTCGACTATGCGCTGCCTGATGGGCATAAGATCAAGATGT
GGGTGAGCGCAGACGAATGGCACGAAGACCCCGAGATCATCCACCGGAAG
TTCGCCTAAATCGGACAAGAACGCTACCGCGCCCCCGAGATCCTCTTCGA
TCCGGAACTTATTGGCTTGGAGTACCCCGGTGTACATCAAATCGTGCAGG
ACGCCATTACCCGCACGGATCTCGACTTGCGGAAGTCTCTCTACCTCAAT
ATCGTTCTGTCTGGTGGATCAACGCTGTGCAAGAATTTCCCGGACCGGTT
GATGCGCGAGATCAAGCGTCTGGCCGTGGAGGATATGAAGATCCGAATCT
CTGCTCCCGCGGAACGGAAGTACACGACATGGATCGGAGGTGGTATTCTT
GCTGGCTTGAGCACCTTCCGGAAGATGGCAGAGGCCACCCTCCACAACGC
TCCGATCGTCATTGACAATGGCAGCGGGACCATCCGCGCTGGCTTTGCCG
GTGAAGAGATCCCCTCCTGCTACTTCCCCTCGTTCGTGGGCCGGCCCAAA
CATCCGCGGGTGATGGCCGGCGGTCTCGAAGGCGACGTCTTTATCGGACA
ACGAGCTCAGGAATTGCGCGGCTTGCTCAAGATTCGTTACCCTCTGGAAC
ATGGAATTGTAACAGACTGGGATGATATGGAGAAAATCTGGCACTACGTG
TACGAGAACGAGCTGAAAACGCTGCCGGAGGAACACCCCGTGCTCCTGAC
TGAGCCACCGCTCAACCCACGCAAGAACCGCGACGCTGCCGCCCAAATTA
TGTTCGAGACATTCAACGTTCCTGCGCTGTACACCTCGATTCAAGCTGTG
CTATCATTGTACGCGTCCGGTCGGACAACAGGTGTGGTCCTCGATTCAGG
GGATGGTGTGTCCCATGCGGTGCCAGTGTTCGAAGGTTTCGCGATCCCGA
ACAGTATACGGCGGATTGATGTGGCGGGTCGGGATGTGACGGAGCAGTTG
CAACTACTGTTACGAAAGAACGGACATGTGCTGCATACCAGTGCGGAGAA
GGAGGTCGTCCGCATGATCAAGGAGAAGGTGTGCTACGTTTCGCTGGATC
CGAAGCGAGAGGAGAAAGACTGGATGAATAGTTATCACAAGTCGGAGACG
AAGTCTGTCGACTATGCGCTGCCTGATGGGCATAAGATCAAGATGTGGGT
GAGCGCAGACGAATGGCACGAAGACCCCGAGATCATCCACCGGAAGTTCG
CCTAAATCGGACAAGAACGCTACCGCGCCCCCGAGATCCTCTTCGATCCG
GAACTTATTGGCTTGGAGTACCCCGGTGTACATCAAATCGTGCAGGACGC
CATTACCCGCACGGATCTCGACTTGCGGAAGTCTCTCTACCTCAATATCG
TTCTGTCTGGTGGATCAACGCTGTGCAAGAATTTCCCGGACCGGTTGATG
CGCGAGATCAAGCGTCTGGCCGTGGAGGATATGAAGATCCGAATCTCTGC
TCCCGCGGAACGGAAGTACACGACATGGATCGGAGGTGGTATTCTTGCTG
GCTTGAGCACCTTCCGGAAGATGGCAGAGGCCACCCTCCACAACGCTCCG
ATCGTCATTGACAATGGCAGCGGGACCATCCGCGCTGGCTTTGCCGGTGA
AGAGATCCCCTCCTGCTACTTCCCCTCGTTCGTGGGCCGGCCCAAACATC
CGCGGGTGATGGCCGGCGGTCTCGAAGGCGACGTCTTTATCGGACAACGA
GCTCAGGAATTGCGCGGCTTGCTCAAGATTCGTTACCCTCTGGAACATGG
AATTGTAACAGACTGGGATGATATGGAGAAAATCTGGCACTACGTGTACG
AGAACGAGCTGAAAACGCTGCCGGAGGAACACCCCGTGCTCCTGACTGAG
CCACCGCTCAACCCACGCAAGAACCGCGACGCTGCCGCCCAAATTATGTT
CGAGACATTCAACGTTCCTGCGCTGTACACCTCGATTCAAGCTGTGCTAT
CATTGTACGCGTCCGGTCGGACAACAGGTGTGGTCCTCGATTCAGGGGAT
GGTGTGTCCCATGCGGTGCCAGTGTTCGAAGGTTTCGCGATCCCGAACAG
TATACGGCGGATTGATGTGGCGGGTCGGGATGTGACGGAGCAGTTGCAAC
TACTGTTACGAAAGAACGGACATGTGCTGCATACCAGTGCGGAGAAGGAG
GTCGTCCGCATGATCAAGGAGAAGGTGTGCTACGTTTCGCTGGATCCGAA
GCGAGAGGAGAAAGACTGGATGAATAGTTATCACAAGTCGGAGACGAAGT
CTGTCGACTATGCGCTGCCTGATGGGCATAAGATCAAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RO4KJC3_010665Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010665-T1KJC3_010665-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010665-T1.cdsKJC3_010665-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010665-T1.utr3p1KJC3_010665-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010665-T1.exon3KJC3_010665-T1.exon3Aspergillus niger KJC3exon
KJC3_010665-T1.exon2KJC3_010665-T1.exon2Aspergillus niger KJC3exon
KJC3_010665-T1.exon1KJC3_010665-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010665-T1.utr5p1KJC3_010665-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR043129
DBxrefInterPro:IPR020902
DBxrefInterPro:IPR004000
DBxrefPFAM:PF00022
ProductActin-like protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:4026759..4028907 -
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