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KJC3_010678-T1, KJC3_010678-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010678-T1
Unique NameKJC3_010678-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:4056506..4057946-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010678-T1 ID=KJC3_010678-T1|Name=KJC3_010678-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1441bp|location=Sequence derived from alignment at ch7:4056506..4057946- (Aspergillus niger KJC3)
AAAAGAACCACATCTACCCATTGGATCCATTTTACATGACTAACCACCTG
AGTACAATCATCCAACCCCCATAATAACCCAGGATAGTGTGCTAGTGACA
GCCAAATCCAATGAACCAGACAACCAAACCCAACCCAAACCATTCCTGCA
GGATCATTCAATATGCAAAATAATGTCCGATATCGCTCCGATATTGTCCA
AATCAAATCCATGAGCACTCATCTGCTGCAGGGGTTGAGGTGAGATTTCG
GATCGCCGATGAACTATAGCATGACTCACTCCGCCCTAACCATAGGTTGT
AGGAGTAATAGTAGTTTAAATTCCAATCAGTACCTTCAATTCATTATTAC
TATGCTCGATGCTAGCGAATTATCCCTGCGTACAATCCGTCCTTGACTAC
TATGTTCCAAACCCGCCATATATGCCGAGCTACACGGGCTCGTCTGTCCA
TTTCACCATGGAGGAGGACCCAGGCAATGGGGATGGCACTCAGCTCGAAG
ATTCAAACGATTGATGATGAGAATACTTCTCCTACAGAGAATAACTCAAG
GTATGCATTAGATATCCCTAATCAGTTAGGAACTGCCCTTATAAAGTGAC
ATTGACTCATTCCCACCACCCACAAACAGACCAACAGACCATCCCACACC
ATCAAGACAACCTCATCAACACTCAACACCAACAAAATCACCACCCCACA
ACCGCCACCGTCTACACGAATTGTACGAACAATTCCCCCCAAGCAAACCT
CCTCCATCAATACGACCCCCTAACCCACACACCTCCAGCTTCATCGGCAA
AACCGGCGGCCAAATCTTCCACGAAATGATGCGCCTCCACAACGTCAAAC
ACATCTGTAAGCCTGTCTCTCCCCTTCCCTCTTTCCAACTATACACCCTC
CCAACTAACCACCACCACCACCATCTCCCTCCCTTTAGTCGGCTACCCAG
GCGGCACCATCCTCCCCATCCTGGACGCGCTCTACGCCTCCCCGCATCTA
ACATTCATCCTCCCCAAACACGAGCAATCAGCCGGCCACATGGCCGAAGG
CTACGCGCGCGCCTCGATCTCCTCATATCCCACCCCCGGCATCGTCCTCG
TAACCTCCGGCCCCGGCGCAACGAATCTCATCACGCCGCTGCAGAACGCC
CTCAGCGACGGCACCCCGCTCATTGCTTTCTGTGGACAGGTGGCGACGAG
CGCCATCGGGAAGGACGGGTTCCAGGAGGCGGATGTGTTGGGGATGACGA
GATTTTGTACGAAGTGGAATGTGGGCGTTAAGCATGTGAGGGAGTTGCCG
CAGAGGATTGAGGAGGCGTTTTGGGTGGCGTTGAGTGGGAGGATGGGGCC
TGTGGTCGTGGAGGTGCCCAAGGATGTGGGGGCGGGGGTTTATTCTTGAT
ATGTATTATGGCTTGTTTGTATTGGAGGTTCGTTTGTTTGG
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Coding sequence (CDS) from alignment at ch7:4056506..4057946-

>KJC3_010678-T1 ID=KJC3_010678-T1|Name=KJC3_010678-T1|organism=Aspergillus niger KJC3|type=CDS|length=3084bp|location=Sequence derived from alignment at ch7:4056506..4057946- (Aspergillus niger KJC3)
TCGGCTACCCAGGCGGCACCATCCTCCCCATCCTGGACGCGCTCTACGCC
TCCCCGCATCTAACATTCATCCTCCCCAAACACGAGCAATCAGCCGGCCA
CATGGCCGAAGGCTACGCGCGCGCCTCGATCTCCTCATATCCCACCCCCG
GCATCGTCCTCGTAACCTCCGGCCCCGGCGCAACGAATCTCATCACGCCG
CTGCAGAACGCCCTCAGCGACGGCACCCCGCTCATTGCTTTCTGTGGACA
GGTGGCGACGAGCGCCATCGGGAAGGACGGGTTCCAGGAGGCGGATGTGT
TGGGGATGACGAGATTTTGTACGAAGTGGAATGTGGGCGTTAAGCATGTG
AGGGAGTTGCCGCAGAGGATTGAGGAGGCGTTTTGGGTGGCGTTGAGTGG
GAGGATGGGGCCTGTGGTCGTGGAGGTGCCCAAGGATGTGGGGGCGGGGG
TTTATTCTTGACTTCATCGGCAAAACCGGCGGCCAAATCTTCCACGAAAT
GATGCGCCTCCACAACGTCAAACACATCTACCAACAGACCATCCCACACC
ATCAAGACAACCTCATCAACACTCAACACCAACAAAATCACCACCCCACA
ACCGCCACCGTCTACACGAATTATGTTCCAAACCCGCCATATATGCCGAG
CTACACGGGCTCGTCTGTCCATTTCACCATGGAGGAGGACCCAGGCAATG
GGGATGGCACTCAGCTCGAAGATTCAAACGATTGATGATGAGAATACTTC
TCCTACAGAGAATAACTCAAGTCGGCTACCCAGGCGGCACCATCCTCCCC
ATCCTGGACGCGCTCTACGCCTCCCCGCATCTAACATTCATCCTCCCCAA
ACACGAGCAATCAGCCGGCCACATGGCCGAAGGCTACGCGCGCGCCTCGA
TCTCCTCATATCCCACCCCCGGCATCGTCCTCGTAACCTCCGGCCCCGGC
GCAACGAATCTCATCACGCCGCTGCAGAACGCCCTCAGCGACGGCACCCC
GCTCATTGCTTTCTGTGGACAGGTGGCGACGAGCGCCATCGGGAAGGACG
GGTTCCAGGAGGCGGATGTGTTGGGGATGACGAGATTTTGTACGAAGTGG
AATGTGGGCGTTAAGCATGTGAGGGAGTTGCCGCAGAGGATTGAGGAGGC
GTTTTGGGTGGCGTTGAGTGGGAGGATGGGGCCTGTGGTCGTGGAGGTGC
CCAAGGATGTGGGGGCGGGGGTTTATTCTTGACTTCATCGGCAAAACCGG
CGGCCAAATCTTCCACGAAATGATGCGCCTCCACAACGTCAAACACATCT
ACCAACAGACCATCCCACACCATCAAGACAACCTCATCAACACTCAACAC
CAACAAAATCACCACCCCACAACCGCCACCGTCTACACGAATTATGTTCC
AAACCCGCCATATATGCCGAGCTACACGGGCTCGTCTGTCCATTTCACCA
TGGAGGAGGACCCAGGCAATGGGGATGGCACTCAGCTCGAAGATTCAAAC
GATTGATGATGAGAATACTTCTCCTACAGAGAATAACTCAAGTCGGCTAC
CCAGGCGGCACCATCCTCCCCATCCTGGACGCGCTCTACGCCTCCCCGCA
TCTAACATTCATCCTCCCCAAACACGAGCAATCAGCCGGCCACATGGCCG
AAGGCTACGCGCGCGCCTCGATCTCCTCATATCCCACCCCCGGCATCGTC
CTCGTAACCTCCGGCCCCGGCGCAACGAATCTCATCACGCCGCTGCAGAA
CGCCCTCAGCGACGGCACCCCGCTCATTGCTTTCTGTGGACAGGTGGCGA
CGAGCGCCATCGGGAAGGACGGGTTCCAGGAGGCGGATGTGTTGGGGATG
ACGAGATTTTGTACGAAGTGGAATGTGGGCGTTAAGCATGTGAGGGAGTT
GCCGCAGAGGATTGAGGAGGCGTTTTGGGTGGCGTTGAGTGGGAGGATGG
GGCCTGTGGTCGTGGAGGTGCCCAAGGATGTGGGGGCGGGGGTTTATTCT
TGACTTCATCGGCAAAACCGGCGGCCAAATCTTCCACGAAATGATGCGCC
TCCACAACGTCAAACACATCTACCAACAGACCATCCCACACCATCAAGAC
AACCTCATCAACACTCAACACCAACAAAATCACCACCCCACAACCGCCAC
CGTCTACACGAATTATGTTCCAAACCCGCCATATATGCCGAGCTACACGG
GCTCGTCTGTCCATTTCACCATGGAGGAGGACCCAGGCAATGGGGATGGC
ACTCAGCTCGAAGATTCAAACGATTGATGATGAGAATACTTCTCCTACAG
AGAATAACTCAAGTCGGCTACCCAGGCGGCACCATCCTCCCCATCCTGGA
CGCGCTCTACGCCTCCCCGCATCTAACATTCATCCTCCCCAAACACGAGC
AATCAGCCGGCCACATGGCCGAAGGCTACGCGCGCGCCTCGATCTCCTCA
TATCCCACCCCCGGCATCGTCCTCGTAACCTCCGGCCCCGGCGCAACGAA
TCTCATCACGCCGCTGCAGAACGCCCTCAGCGACGGCACCCCGCTCATTG
CTTTCTGTGGACAGGTGGCGACGAGCGCCATCGGGAAGGACGGGTTCCAG
GAGGCGGATGTGTTGGGGATGACGAGATTTTGTACGAAGTGGAATGTGGG
CGTTAAGCATGTGAGGGAGTTGCCGCAGAGGATTGAGGAGGCGTTTTGGG
TGGCGTTGAGTGGGAGGATGGGGCCTGTGGTCGTGGAGGTGCCCAAGGAT
GTGGGGGCGGGGGTTTATTCTTGACTTCATCGGCAAAACCGGCGGCCAAA
TCTTCCACGAAATGATGCGCCTCCACAACGTCAAACACATCTACCAACAG
ACCATCCCACACCATCAAGACAACCTCATCAACACTCAACACCAACAAAA
TCACCACCCCACAACCGCCACCGTCTACACGAATTATGTTCCAAACCCGC
CATATATGCCGAGCTACACGGGCTCGTCTGTCCATTTCACCATGGAGGAG
GACCCAGGCAATGGGGATGGCACTCAGCTCGAAGATTCAAACGATTGATG
ATGAGAATACTTCTCCTACAGAGAATAACTCAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0030976thiamine pyrophosphate binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ILV1_2KJC3_010678Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010678-T1KJC3_010678-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010678-T1.cdsKJC3_010678-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010678-T1.utr3p1KJC3_010678-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010678-T1.exon5KJC3_010678-T1.exon5Aspergillus niger KJC3exon
KJC3_010678-T1.exon4KJC3_010678-T1.exon4Aspergillus niger KJC3exon
KJC3_010678-T1.exon3KJC3_010678-T1.exon3Aspergillus niger KJC3exon
KJC3_010678-T1.exon2KJC3_010678-T1.exon2Aspergillus niger KJC3exon
KJC3_010678-T1.exon1KJC3_010678-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010678-T1.utr5p2KJC3_010678-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_010678-T1.utr5p1KJC3_010678-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029061
DBxrefInterPro:IPR012001
DBxrefPFAM:PF02776
Productthreonine deaminase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:4056506..4057946 -
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