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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:4169411..4171476+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010713-T1 ID=KJC3_010713-T1|Name=KJC3_010713-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2066bp|location=Sequence derived from alignment at ch7:4169411..4171476+ (Aspergillus niger KJC3)
ATTTAGGTTCTGAGTCCAGCATTTTAATCGTGCTTTAGCTCGGAAAAATT
TCTTCTGCTGCTGCTGCTGCTGCTCCTGTTCGATCTTTCCACATAATCTG
TCCCTGCTCATCTCTCCATCCCTGTCTTTTTCTATGTCTGCGTGCTGAAG
TGAAGACTGGAATCGACGAGCACGATGGAGTTCGAGCACGAGCCCAAGCA
GCAGGTCGATGGTGTTGTGGCCACCGATTTACCACATTCCGACAGTCCAT
CCACTGTGGATGTGCCGATCAATGCTTCTGGCCACAAACAGGAGCTCGAG
CGCAACTTTGGCTTCATTAACATTTGTGGCTTGGCTCTGACCAGCGGAAA
CACCTGGATTGCTCTGGGTGGGAGTATCGTGAGTGGCTTCTTCCATTGGG
TTTGCTCTATAGATCTCGTCATCTTTAGATTTGCCTGTCTCCGACCGTCT
CATAACTGACACTTCCTTCTATTCAGGTCACGGCTATCTATGATGGAGGT
CCGCCCGGTGTGATCTATGAGATGTATGCTCCCTGTCATAGTCATTGTAC
CCCAGAGTAAATGCTAACGTTCTTCTAGGATCGCAGCCTCATTCTTCTAC
TGGTTCATTGCTGCATCTCTCGCGGAACTGGCCTCGTCTATGCCGTCATC
TGGTGGAGGTTCGTCTTTAACCTTGCATACACTCGGAACAAGAAACTGAT
CTCTGCAGTCTACCACTGGGCATCCGTCACAGCAGGAAGATACGGTCGCG
TCTGCGGCTGGTTTGCCGGTTGGTGGAACTTCCTGGCCTGGATCTTCGGT
GCTGCCTCAACGACACAGATTCTGGGCACGCAGGTCGTGTCCGCATACGC
TTTGTTCCACCCCGACTATACCATCGAGCGCTGGCACGTCTTCATCGCCT
ACTTGATCTGCTCCATTCTCTGCTGCTTCTTGGTTGCATTCGCCAATCGT
GCACTCCCCATGATAGAATCACTAGGCGGATTCCTCGTTGTCGGTGGCTT
CCTCGTCACCGTCATTGTCTGTGCCGTGATGCCCCATGTCAACGGACAGC
CGTACGCCACAGACGACTTCGTCTGGCGCGACTGGCTCAACGAGGCTGGA
TACAGTAGCGACGGCTTCGTCTTCTGTCTGGGAATGCTGAACGGTGCCTT
CGCCGTCGGCACGCCCGACGTCATCTCCCATCTGGCCGAGGAGGTGCCCA
AACCGGGGAAGAACATTCCTCTGGGCATGCTGGCTCAGTACGTGATGGGC
TTCTTCACAGCCTTCCTCTACCTGATTGTCATCTTCTACGGTATCACCGA
CCTGAACGCCGTTCTCGAAGCCCCCTACCTCTTCCCTCTGACCGAAATCT
ACCTCCAAATCACCGGCACCCGCGGCGGCTCTCTCGGACTGATCATCGTC
TCCATGCTCCCGCTCTTCGTCGCCATCGTCGGCTGTTACCTCACCTCCAG
CCGTGTGCTCTGGACATTGGCGCGCGACCGCGCTACTCCTTTCAGTGGCT
ACCTGGGTCGGGTCAACCACCGCTTCAAGAACCCTCTCAACTCGGTGCTC
GTCTGCGGCTTGATTGCGATCATCCTCGGCTGCATCTACGTCGGTAACTC
CACTGCATTTAGCGCTTTCGTCAGCTCCTTCGTCGTCCTGACCACCTTGT
CTTATTCCGCTGCTATTCTTCCGCACCTTCTTCGTGGCCGTCAGGGCATT
CCCCGCGGCTGGTTCTGGATGAGTGGCATCACGGGATACCTTGTTAACGC
GGTGACTTGTCTGTACATGATCGTGTTCATTGTTATCTTCTGCTTCCCGT
TCTCGATGCCTGTGGATGCTGAGACGATGAACTACACGTGTTTGATCACG
GGCGGGTTCACTATTTTCATTGCGCTGTTCTGGTTTATTCGTCAGGGCAG
CTATACTGGGCCCAAGGCTATTGCGCTGGAGAGTAGTGCGTTGGCTAAGG
ATGCTATTTAATGAAGGAGTAAATGTTGTACTGTATATAAGGAGAGCTAA
AAGTCTGTTGAGTTTAATAATAATATATATAAGACGAGTGATAGACAAAA
GCAGCTGTCAGTGCAT back to topCoding sequence (CDS) from alignment at ch7:4169411..4171476+ >KJC3_010713-T1 ID=KJC3_010713-T1|Name=KJC3_010713-T1|organism=Aspergillus niger KJC3|type=CDS|length=6336bp|location=Sequence derived from alignment at ch7:4169411..4171476+ (Aspergillus niger KJC3)
ATGGAGTTCGAGCACGAGCCCAAGCAGCAGGTCGATGGTGTTGTGGCCAC
CGATTTACCACATTCCGACAGTCCATCCACTGTGGATGTGCCGATCAATG
CTTCTGGCCACAAACAGGAGCTCGAGCGCAACTTTGGCTTCATTAACATT
TGTGGCTTGGCTCTGACCAGCGGAAACACCTGGATTGCTCTGGGTGGGAG
TATCGTCACGGCTATCTATGATGGAGGTCCGCCCGGTGTGATCTATGAGA
TGATCGCAGCCTCATTCTTCTACTGGTTCATTGCTGCATCTCTCGCGGAA
CTGGCCTCGTCTATGCCGTCATCTGGTGGAGTCTACCACTGGGCATCCGT
CACAGCAGGAAGATACGGTCGCGTCTGCGGCTGGTTTGCCGGTTGGTGGA
ACTTCCTGGCCTGGATCTTCGGTGCTGCCTCAACGACACAGATTCTGGGC
ACGCAGGTCGTGTCCGCATACGCTTTGTTCCACCCCGACTATACCATCGA
GCGCTGGCACGTCTTCATCGCCTACTTGATCTGCTCCATTCTCTGCTGCT
TCTTGGTTGCATTCGCCAATCGTGCACTCCCCATGATAGAATCACTAGGC
GGATTCCTCGTTGTCGGTGGCTTCCTCGTCACCGTCATTGTCTGTGCCGT
GATGCCCCATGTCAACGGACAGCCGTACGCCACAGACGACTTCGTCTGGC
GCGACTGGCTCAACGAGGCTGGATACAGTAGCGACGGCTTCGTCTTCTGT
CTGGGAATGCTGAACGGTGCCTTCGCCGTCGGCACGCCCGACGTCATCTC
CCATCTGGCCGAGGAGGTGCCCAAACCGGGGAAGAACATTCCTCTGGGCA
TGCTGGCTCAGTACGTGATGGGCTTCTTCACAGCCTTCCTCTACCTGATT
GTCATCTTCTACGGTATCACCGACCTGAACGCCGTTCTCGAAGCCCCCTA
CCTCTTCCCTCTGACCGAAATCTACCTCCAAATCACCGGCACCCGCGGCG
GCTCTCTCGGACTGATCATCGTCTCCATGCTCCCGCTCTTCGTCGCCATC
GTCGGCTGTTACCTCACCTCCAGCCGTGTGCTCTGGACATTGGCGCGCGA
CCGCGCTACTCCTTTCAGTGGCTACCTGGGTCGGGTCAACCACCGCTTCA
AGAACCCTCTCAACTCGGTGCTCGTCTGCGGCTTGATTGCGATCATCCTC
GGCTGCATCTACGTCGGTAACTCCACTGCATTTAGCGCTTTCGTCAGCTC
CTTCGTCGTCCTGACCACCTTGTCTTATTCCGCTGCTATTCTTCCGCACC
TTCTTCGTGGCCGTCAGGGCATTCCCCGCGGCTGGTTCTGGATGAGTGGC
ATCACGGGATACCTTGTTAACGCGGTGACTTGTCTGTACATGATCGTGTT
CATTGTTATCTTCTGCTTCCCGTTCTCGATGCCTGTGGATGCTGAGACGA
TGAACTACACGTGTTTGATCACGGGCGGGTTCACTATTTTCATTGCGCTG
TTCTGGTTTATTCGTCAGGGCAGCTATACTGGGCCCAAGGCTATTGCGCT
GGAGAGTAGTGCGTTGGCTAAGGATGCTATTTAAATGGAGTTCGAGCACG
AGCCCAAGCAGCAGGTCGATGGTGTTGTGGCCACCGATTTACCACATTCC
GACAGTCCATCCACTGTGGATGTGCCGATCAATGCTTCTGGCCACAAACA
GGAGCTCGAGCGCAACTTTGGCTTCATTAACATTTGTGGCTTGGCTCTGA
CCAGCGGAAACACCTGGATTGCTCTGGGTGGGAGTATCGTCACGGCTATC
TATGATGGAGGTCCGCCCGGTGTGATCTATGAGATGATCGCAGCCTCATT
CTTCTACTGGTTCATTGCTGCATCTCTCGCGGAACTGGCCTCGTCTATGC
CGTCATCTGGTGGAGTCTACCACTGGGCATCCGTCACAGCAGGAAGATAC
GGTCGCGTCTGCGGCTGGTTTGCCGGTTGGTGGAACTTCCTGGCCTGGAT
CTTCGGTGCTGCCTCAACGACACAGATTCTGGGCACGCAGGTCGTGTCCG
CATACGCTTTGTTCCACCCCGACTATACCATCGAGCGCTGGCACGTCTTC
ATCGCCTACTTGATCTGCTCCATTCTCTGCTGCTTCTTGGTTGCATTCGC
CAATCGTGCACTCCCCATGATAGAATCACTAGGCGGATTCCTCGTTGTCG
GTGGCTTCCTCGTCACCGTCATTGTCTGTGCCGTGATGCCCCATGTCAAC
GGACAGCCGTACGCCACAGACGACTTCGTCTGGCGCGACTGGCTCAACGA
GGCTGGATACAGTAGCGACGGCTTCGTCTTCTGTCTGGGAATGCTGAACG
GTGCCTTCGCCGTCGGCACGCCCGACGTCATCTCCCATCTGGCCGAGGAG
GTGCCCAAACCGGGGAAGAACATTCCTCTGGGCATGCTGGCTCAGTACGT
GATGGGCTTCTTCACAGCCTTCCTCTACCTGATTGTCATCTTCTACGGTA
TCACCGACCTGAACGCCGTTCTCGAAGCCCCCTACCTCTTCCCTCTGACC
GAAATCTACCTCCAAATCACCGGCACCCGCGGCGGCTCTCTCGGACTGAT
CATCGTCTCCATGCTCCCGCTCTTCGTCGCCATCGTCGGCTGTTACCTCA
CCTCCAGCCGTGTGCTCTGGACATTGGCGCGCGACCGCGCTACTCCTTTC
AGTGGCTACCTGGGTCGGGTCAACCACCGCTTCAAGAACCCTCTCAACTC
GGTGCTCGTCTGCGGCTTGATTGCGATCATCCTCGGCTGCATCTACGTCG
GTAACTCCACTGCATTTAGCGCTTTCGTCAGCTCCTTCGTCGTCCTGACC
ACCTTGTCTTATTCCGCTGCTATTCTTCCGCACCTTCTTCGTGGCCGTCA
GGGCATTCCCCGCGGCTGGTTCTGGATGAGTGGCATCACGGGATACCTTG
TTAACGCGGTGACTTGTCTGTACATGATCGTGTTCATTGTTATCTTCTGC
TTCCCGTTCTCGATGCCTGTGGATGCTGAGACGATGAACTACACGTGTTT
GATCACGGGCGGGTTCACTATTTTCATTGCGCTGTTCTGGTTTATTCGTC
AGGGCAGCTATACTGGGCCCAAGGCTATTGCGCTGGAGAGTAGTGCGTTG
GCTAAGGATGCTATTTAAATGGAGTTCGAGCACGAGCCCAAGCAGCAGGT
CGATGGTGTTGTGGCCACCGATTTACCACATTCCGACAGTCCATCCACTG
TGGATGTGCCGATCAATGCTTCTGGCCACAAACAGGAGCTCGAGCGCAAC
TTTGGCTTCATTAACATTTGTGGCTTGGCTCTGACCAGCGGAAACACCTG
GATTGCTCTGGGTGGGAGTATCGTCACGGCTATCTATGATGGAGGTCCGC
CCGGTGTGATCTATGAGATGATCGCAGCCTCATTCTTCTACTGGTTCATT
GCTGCATCTCTCGCGGAACTGGCCTCGTCTATGCCGTCATCTGGTGGAGT
CTACCACTGGGCATCCGTCACAGCAGGAAGATACGGTCGCGTCTGCGGCT
GGTTTGCCGGTTGGTGGAACTTCCTGGCCTGGATCTTCGGTGCTGCCTCA
ACGACACAGATTCTGGGCACGCAGGTCGTGTCCGCATACGCTTTGTTCCA
CCCCGACTATACCATCGAGCGCTGGCACGTCTTCATCGCCTACTTGATCT
GCTCCATTCTCTGCTGCTTCTTGGTTGCATTCGCCAATCGTGCACTCCCC
ATGATAGAATCACTAGGCGGATTCCTCGTTGTCGGTGGCTTCCTCGTCAC
CGTCATTGTCTGTGCCGTGATGCCCCATGTCAACGGACAGCCGTACGCCA
CAGACGACTTCGTCTGGCGCGACTGGCTCAACGAGGCTGGATACAGTAGC
GACGGCTTCGTCTTCTGTCTGGGAATGCTGAACGGTGCCTTCGCCGTCGG
CACGCCCGACGTCATCTCCCATCTGGCCGAGGAGGTGCCCAAACCGGGGA
AGAACATTCCTCTGGGCATGCTGGCTCAGTACGTGATGGGCTTCTTCACA
GCCTTCCTCTACCTGATTGTCATCTTCTACGGTATCACCGACCTGAACGC
CGTTCTCGAAGCCCCCTACCTCTTCCCTCTGACCGAAATCTACCTCCAAA
TCACCGGCACCCGCGGCGGCTCTCTCGGACTGATCATCGTCTCCATGCTC
CCGCTCTTCGTCGCCATCGTCGGCTGTTACCTCACCTCCAGCCGTGTGCT
CTGGACATTGGCGCGCGACCGCGCTACTCCTTTCAGTGGCTACCTGGGTC
GGGTCAACCACCGCTTCAAGAACCCTCTCAACTCGGTGCTCGTCTGCGGC
TTGATTGCGATCATCCTCGGCTGCATCTACGTCGGTAACTCCACTGCATT
TAGCGCTTTCGTCAGCTCCTTCGTCGTCCTGACCACCTTGTCTTATTCCG
CTGCTATTCTTCCGCACCTTCTTCGTGGCCGTCAGGGCATTCCCCGCGGC
TGGTTCTGGATGAGTGGCATCACGGGATACCTTGTTAACGCGGTGACTTG
TCTGTACATGATCGTGTTCATTGTTATCTTCTGCTTCCCGTTCTCGATGC
CTGTGGATGCTGAGACGATGAACTACACGTGTTTGATCACGGGCGGGTTC
ACTATTTTCATTGCGCTGTTCTGGTTTATTCGTCAGGGCAGCTATACTGG
GCCCAAGGCTATTGCGCTGGAGAGTAGTGCGTTGGCTAAGGATGCTATTT
AAATGGAGTTCGAGCACGAGCCCAAGCAGCAGGTCGATGGTGTTGTGGCC
ACCGATTTACCACATTCCGACAGTCCATCCACTGTGGATGTGCCGATCAA
TGCTTCTGGCCACAAACAGGAGCTCGAGCGCAACTTTGGCTTCATTAACA
TTTGTGGCTTGGCTCTGACCAGCGGAAACACCTGGATTGCTCTGGGTGGG
AGTATCGTCACGGCTATCTATGATGGAGGTCCGCCCGGTGTGATCTATGA
GATGATCGCAGCCTCATTCTTCTACTGGTTCATTGCTGCATCTCTCGCGG
AACTGGCCTCGTCTATGCCGTCATCTGGTGGAGTCTACCACTGGGCATCC
GTCACAGCAGGAAGATACGGTCGCGTCTGCGGCTGGTTTGCCGGTTGGTG
GAACTTCCTGGCCTGGATCTTCGGTGCTGCCTCAACGACACAGATTCTGG
GCACGCAGGTCGTGTCCGCATACGCTTTGTTCCACCCCGACTATACCATC
GAGCGCTGGCACGTCTTCATCGCCTACTTGATCTGCTCCATTCTCTGCTG
CTTCTTGGTTGCATTCGCCAATCGTGCACTCCCCATGATAGAATCACTAG
GCGGATTCCTCGTTGTCGGTGGCTTCCTCGTCACCGTCATTGTCTGTGCC
GTGATGCCCCATGTCAACGGACAGCCGTACGCCACAGACGACTTCGTCTG
GCGCGACTGGCTCAACGAGGCTGGATACAGTAGCGACGGCTTCGTCTTCT
GTCTGGGAATGCTGAACGGTGCCTTCGCCGTCGGCACGCCCGACGTCATC
TCCCATCTGGCCGAGGAGGTGCCCAAACCGGGGAAGAACATTCCTCTGGG
CATGCTGGCTCAGTACGTGATGGGCTTCTTCACAGCCTTCCTCTACCTGA
TTGTCATCTTCTACGGTATCACCGACCTGAACGCCGTTCTCGAAGCCCCC
TACCTCTTCCCTCTGACCGAAATCTACCTCCAAATCACCGGCACCCGCGG
CGGCTCTCTCGGACTGATCATCGTCTCCATGCTCCCGCTCTTCGTCGCCA
TCGTCGGCTGTTACCTCACCTCCAGCCGTGTGCTCTGGACATTGGCGCGC
GACCGCGCTACTCCTTTCAGTGGCTACCTGGGTCGGGTCAACCACCGCTT
CAAGAACCCTCTCAACTCGGTGCTCGTCTGCGGCTTGATTGCGATCATCC
TCGGCTGCATCTACGTCGGTAACTCCACTGCATTTAGCGCTTTCGTCAGC
TCCTTCGTCGTCCTGACCACCTTGTCTTATTCCGCTGCTATTCTTCCGCA
CCTTCTTCGTGGCCGTCAGGGCATTCCCCGCGGCTGGTTCTGGATGAGTG
GCATCACGGGATACCTTGTTAACGCGGTGACTTGTCTGTACATGATCGTG
TTCATTGTTATCTTCTGCTTCCCGTTCTCGATGCCTGTGGATGCTGAGAC
GATGAACTACACGTGTTTGATCACGGGCGGGTTCACTATTTTCATTGCGC
TGTTCTGGTTTATTCGTCAGGGCAGCTATACTGGGCCCAAGGCTATTGCG
CTGGAGAGTAGTGCGTTGGCTAAGGATGCTATTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006865 | amino acid transport |
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010713-T1.utr5p1 | KJC3_010713-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010713-T1.utr3p1 | KJC3_010713-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004840 |
| DBxref | InterPro:IPR002293 |
| DBxref | PFAM:PF13520 |
| DBxref | PFAM:PF00324 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:4169411..4171476 + |
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