You are here

Home

KJC3_010718-T1, KJC3_010718-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010718-T1
Unique NameKJC3_010718-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:4180227..4181648-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010718-T1 ID=KJC3_010718-T1|Name=KJC3_010718-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1422bp|location=Sequence derived from alignment at ch7:4180227..4181648- (Aspergillus niger KJC3)
TCCTCACCACTCAAATCAGTCAAACTGTCTCAATGCTGCCGATATCCTCT
GCAGGTCTCCATTCTCTCAAGATGCGGGTATACTCAGCTCTAGTAGCTTC
AAGACTCCCTAGCTGTAGACTGATCGTCAACAGTCGTCTCCACCGCACAG
CAAGCACAGCGTCAACCTCCTCAATTTACACTGATAAATATATTGGCCAA
TCTGGCCGTCATTATAAGGTTGAACAAGTTCTTCAGGAAGAAATATCTCC
GCCACGTCAGGTTCTCCGTGCAACGTGAGTAGACCTTGACTAGTACCTTT
CGAAATCACTACCTTACTGTCCATTAGCGCTGGCGATAAGAGGTTCATAT
TGAAGTATATTCACGCGGTCAATTTTGAAGACCTCCAAGTCATAAACAAC
AGGTTACGCAACAATGCCAGCCATGTTCGTCTTCCCCAGGATATCATCCC
TGATAAATCGATGTTTGTGTTTGAATACTTCACCGGTCATCTTCTACACC
TAGCCCAACAGGACTTGTCTCTACAAACAAGGAAAAGGCTCCTAAAAGAA
GGTCTTCGTGCAATTGCTGAGATGCATGATAAAGATATTGTTCATACAGG
TAGATCATTGTACCCCGTGGATCAGGCAGCAGCTGACTTTACGTAGACAT
CAAACCGGACAACTTCTTCGTCAACTGGAAACATTCCGATGATGGCATCA
CAATCGGGAAAGTCCAGCTTGGTGATCTTGAAGACGCTGTATACATTCCC
CCTGGTTCATGTATGCGTGGGAAGCAAGCAGGCAACTGGATGTGGAGGAG
CCCCGAAGCGCATGCTAGAGGAAAGGTGAATAAATCGTCTGATATCTTCT
CTTTTGCTCTCGTTGTAGGTGTTGTCTCTCTGAAAGGTTCTTCAATTTGT
TGACGCGCTAGTAGTGTATCTATGTGGTACATAAGCGGGTCATATTTGCG
GTCAGCGACGACGAATTGGATGAGGGCATTGATCGATTAGCCATTGTGAT
TGAGCGTCAGATCTCATACTTCGCTGACAAAGATGGATTCCATGGATTTC
TCGAATGCCTTGATGATAATCCTTGGGCGGCTGTCTTTAATATAACGCTA
AATGGATTCAATCAGGAGAATCCGGTCAGACCATTTTCGCTTTGGAAGGG
AGTTGACGATGATTTTAAAAGCCTTATCTGTGCCATGACAAATTTCGATC
CAAGGAGAAGACTTACGGCACGAGAAGCATTGGCACATAAATGGTTTGAC
GGTGCGTGAGATGAGTGGAGGAGCAATTATTCCGACTATGAGACAGTACA
TGGTTATTGTTAAGCAAATATGTGTTGCGGCAATTACAGAATATACCAGC
TAGCCAACTAATAGCTCCCAAAGTGCACATGTCTCTTATGGGGGGCATCC
CGGAGAGCCTAATGAAGAAGCC
back to top

Coding sequence (CDS) from alignment at ch7:4180227..4181648-

>KJC3_010718-T1 ID=KJC3_010718-T1|Name=KJC3_010718-T1|organism=Aspergillus niger KJC3|type=CDS|length=4308bp|location=Sequence derived from alignment at ch7:4180227..4181648- (Aspergillus niger KJC3)
TGTATCTATGTGGTACATAAGCGGGTCATATTTGCGGTCAGCGACGACGA
ATTGGATGAGGGCATTGATCGATTAGCCATTGTGATTGAGCGTCAGATCT
CATACTTCGCTGACAAAGATGGATTCCATGGATTTCTCGAATGCCTTGAT
GATAATCCTTGGGCGGCTGTCTTTAATATAACGCTAAATGGATTCAATCA
GGAGAATCCGGTCAGACCATTTTCGCTTTGGAAGGGAGTTGACGATGATT
TTAAAAGCCTTATCTGTGCCATGACAAATTTCGATCCAAGGAGAAGACTT
ACGGCACGAGAAGCATTGGCACATAAATGGTTTGACGGTGCGTGAACATC
AAACCGGACAACTTCTTCGTCAACTGGAAACATTCCGATGATGGCATCAC
AATCGGGAAAGTCCAGCTTGGTGATCTTGAAGACGCTGTATACATTCCCC
CTGGTTCATGTATGCGTGGGAAGCAAGCAGGCAACTGGATGTGGAGGAGC
CCCGAAGCGCATGCTAGAGGAAAGGTGAATAAATCGTCTGATATCTTCTC
TTTTGCTCTCGTTCGCTGGCGATAAGAGGTTCATATTGAAGTATATTCAC
GCGGTCAATTTTGAAGACCTCCAAGTCATAAACAACAGGTTACGCAACAA
TGCCAGCCATGTTCGTCTTCCCCAGGATATCATCCCTGATAAATCGATGT
TTGTGTTTGAATACTTCACCGGTCATCTTCTACACCTAGCCCAACAGGAC
TTGTCTCTACAAACAAGGAAAAGGCTCCTAAAAGAAGGTCTTCGTGCAAT
TGCTGAGATGCATGATAAAGATATTGTTCATACAGATGCTGCCGATATCC
TCTGCAGGTCTCCATTCTCTCAAGATGCGGGTATACTCAGCTCTAGTAGC
TTCAAGACTCCCTAGCTGTAGACTGATCGTCAACAGTCGTCTCCACCGCA
CAGCAAGCACAGCGTCAACCTCCTCAATTTACACTGATAAATATATTGGC
CAATCTGGCCGTCATTATAAGGTTGAACAAGTTCTTCAGGAAGAAATATC
TCCGCCACGTCAGGTTCTCCGTGCAACTGTATCTATGTGGTACATAAGCG
GGTCATATTTGCGGTCAGCGACGACGAATTGGATGAGGGCATTGATCGAT
TAGCCATTGTGATTGAGCGTCAGATCTCATACTTCGCTGACAAAGATGGA
TTCCATGGATTTCTCGAATGCCTTGATGATAATCCTTGGGCGGCTGTCTT
TAATATAACGCTAAATGGATTCAATCAGGAGAATCCGGTCAGACCATTTT
CGCTTTGGAAGGGAGTTGACGATGATTTTAAAAGCCTTATCTGTGCCATG
ACAAATTTCGATCCAAGGAGAAGACTTACGGCACGAGAAGCATTGGCACA
TAAATGGTTTGACGGTGCGTGAACATCAAACCGGACAACTTCTTCGTCAA
CTGGAAACATTCCGATGATGGCATCACAATCGGGAAAGTCCAGCTTGGTG
ATCTTGAAGACGCTGTATACATTCCCCCTGGTTCATGTATGCGTGGGAAG
CAAGCAGGCAACTGGATGTGGAGGAGCCCCGAAGCGCATGCTAGAGGAAA
GGTGAATAAATCGTCTGATATCTTCTCTTTTGCTCTCGTTCGCTGGCGAT
AAGAGGTTCATATTGAAGTATATTCACGCGGTCAATTTTGAAGACCTCCA
AGTCATAAACAACAGGTTACGCAACAATGCCAGCCATGTTCGTCTTCCCC
AGGATATCATCCCTGATAAATCGATGTTTGTGTTTGAATACTTCACCGGT
CATCTTCTACACCTAGCCCAACAGGACTTGTCTCTACAAACAAGGAAAAG
GCTCCTAAAAGAAGGTCTTCGTGCAATTGCTGAGATGCATGATAAAGATA
TTGTTCATACAGATGCTGCCGATATCCTCTGCAGGTCTCCATTCTCTCAA
GATGCGGGTATACTCAGCTCTAGTAGCTTCAAGACTCCCTAGCTGTAGAC
TGATCGTCAACAGTCGTCTCCACCGCACAGCAAGCACAGCGTCAACCTCC
TCAATTTACACTGATAAATATATTGGCCAATCTGGCCGTCATTATAAGGT
TGAACAAGTTCTTCAGGAAGAAATATCTCCGCCACGTCAGGTTCTCCGTG
CAACTGTATCTATGTGGTACATAAGCGGGTCATATTTGCGGTCAGCGACG
ACGAATTGGATGAGGGCATTGATCGATTAGCCATTGTGATTGAGCGTCAG
ATCTCATACTTCGCTGACAAAGATGGATTCCATGGATTTCTCGAATGCCT
TGATGATAATCCTTGGGCGGCTGTCTTTAATATAACGCTAAATGGATTCA
ATCAGGAGAATCCGGTCAGACCATTTTCGCTTTGGAAGGGAGTTGACGAT
GATTTTAAAAGCCTTATCTGTGCCATGACAAATTTCGATCCAAGGAGAAG
ACTTACGGCACGAGAAGCATTGGCACATAAATGGTTTGACGGTGCGTGAA
CATCAAACCGGACAACTTCTTCGTCAACTGGAAACATTCCGATGATGGCA
TCACAATCGGGAAAGTCCAGCTTGGTGATCTTGAAGACGCTGTATACATT
CCCCCTGGTTCATGTATGCGTGGGAAGCAAGCAGGCAACTGGATGTGGAG
GAGCCCCGAAGCGCATGCTAGAGGAAAGGTGAATAAATCGTCTGATATCT
TCTCTTTTGCTCTCGTTCGCTGGCGATAAGAGGTTCATATTGAAGTATAT
TCACGCGGTCAATTTTGAAGACCTCCAAGTCATAAACAACAGGTTACGCA
ACAATGCCAGCCATGTTCGTCTTCCCCAGGATATCATCCCTGATAAATCG
ATGTTTGTGTTTGAATACTTCACCGGTCATCTTCTACACCTAGCCCAACA
GGACTTGTCTCTACAAACAAGGAAAAGGCTCCTAAAAGAAGGTCTTCGTG
CAATTGCTGAGATGCATGATAAAGATATTGTTCATACAGATGCTGCCGAT
ATCCTCTGCAGGTCTCCATTCTCTCAAGATGCGGGTATACTCAGCTCTAG
TAGCTTCAAGACTCCCTAGCTGTAGACTGATCGTCAACAGTCGTCTCCAC
CGCACAGCAAGCACAGCGTCAACCTCCTCAATTTACACTGATAAATATAT
TGGCCAATCTGGCCGTCATTATAAGGTTGAACAAGTTCTTCAGGAAGAAA
TATCTCCGCCACGTCAGGTTCTCCGTGCAACTGTATCTATGTGGTACATA
AGCGGGTCATATTTGCGGTCAGCGACGACGAATTGGATGAGGGCATTGAT
CGATTAGCCATTGTGATTGAGCGTCAGATCTCATACTTCGCTGACAAAGA
TGGATTCCATGGATTTCTCGAATGCCTTGATGATAATCCTTGGGCGGCTG
TCTTTAATATAACGCTAAATGGATTCAATCAGGAGAATCCGGTCAGACCA
TTTTCGCTTTGGAAGGGAGTTGACGATGATTTTAAAAGCCTTATCTGTGC
CATGACAAATTTCGATCCAAGGAGAAGACTTACGGCACGAGAAGCATTGG
CACATAAATGGTTTGACGGTGCGTGAACATCAAACCGGACAACTTCTTCG
TCAACTGGAAACATTCCGATGATGGCATCACAATCGGGAAAGTCCAGCTT
GGTGATCTTGAAGACGCTGTATACATTCCCCCTGGTTCATGTATGCGTGG
GAAGCAAGCAGGCAACTGGATGTGGAGGAGCCCCGAAGCGCATGCTAGAG
GAAAGGTGAATAAATCGTCTGATATCTTCTCTTTTGCTCTCGTTCGCTGG
CGATAAGAGGTTCATATTGAAGTATATTCACGCGGTCAATTTTGAAGACC
TCCAAGTCATAAACAACAGGTTACGCAACAATGCCAGCCATGTTCGTCTT
CCCCAGGATATCATCCCTGATAAATCGATGTTTGTGTTTGAATACTTCAC
CGGTCATCTTCTACACCTAGCCCAACAGGACTTGTCTCTACAAACAAGGA
AAAGGCTCCTAAAAGAAGGTCTTCGTGCAATTGCTGAGATGCATGATAAA
GATATTGTTCATACAGATGCTGCCGATATCCTCTGCAGGTCTCCATTCTC
TCAAGATGCGGGTATACTCAGCTCTAGTAGCTTCAAGACTCCCTAGCTGT
AGACTGATCGTCAACAGTCGTCTCCACCGCACAGCAAGCACAGCGTCAAC
CTCCTCAATTTACACTGATAAATATATTGGCCAATCTGGCCGTCATTATA
AGGTTGAACAAGTTCTTCAGGAAGAAATATCTCCGCCACGTCAGGTTCTC
CGTGCAAC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0004672protein kinase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010718KJC3_010718Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010718-T1KJC3_010718-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010718-T1.cdsKJC3_010718-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010718-T1.utr3p1KJC3_010718-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010718-T1.exon4KJC3_010718-T1.exon4Aspergillus niger KJC3exon
KJC3_010718-T1.exon3KJC3_010718-T1.exon3Aspergillus niger KJC3exon
KJC3_010718-T1.exon2KJC3_010718-T1.exon2Aspergillus niger KJC3exon
KJC3_010718-T1.exon1KJC3_010718-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010718-T1.utr5p1KJC3_010718-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011009
DBxrefInterPro:IPR008271
DBxrefInterPro:IPR000719
DBxrefPFAM:PF00069
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:4180227..4181648 -
Powered by Drupal