You are here

Home

KJC3_010722-T1, KJC3_010722-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010722-T1
Unique NameKJC3_010722-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:4187635..4189940+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010722-T1 ID=KJC3_010722-T1|Name=KJC3_010722-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2306bp|location=Sequence derived from alignment at ch7:4187635..4189940+ (Aspergillus niger KJC3)
GGTTGATCCAGTGGCAGTCCGTGCTGCTCCCCGCGTGCATCAACCCATGC
AGCTCTGTGGTATCGACTCCCGCTCTCGCCTTCATGCTCTGCTGCTCACG
TTCCCCTGCAACGGCCATGCGCCCTCCGCGCAAGACCTTATCGCCCTCGG
TCGCCCGACGGTCTCTTGCCTCTAGATGTCTGGGCAGATGCTTATACTAC
TTGTGGTCCCGCCTCCCTGGTCTTGTCTTGCCCCTCAGTCGTCTCTCCCA
GTCGTCAATTCCTGGAGTGACTGGTGAGTGAGGTCTGTCGCCATCGGTTA
CACAAGAAAGACTACAAGCAGCAGCAGCAACACAATGGACCTCTCTTCTT
CACCACGGAGCTCGCTTGAATGGAGTCTAGATGACAGTTCAACCTGTCCC
ACTACCCCCGCCTCTAGTCCGCTGTTTCGCGCCGCAAAGGTGGACGATGT
GCCCTCGTCGCATTGCACCTCTCCCACGGGAATCTCAGGCACCCGGGGAG
CCCACGATGCCGCGAGCGCCAATTCAACGTGCATTCTGGCGGACGATCGC
GTAAAGAGCGTCTGTGTTGTGGGTGCAGGATACGTGGGTAGGCTTCAGCT
GGCACTGCCCTCATTTACGAGCCAAACTAAGCCAGCTCTACAGGCGGACC
AACCGCGGCTGTTCTCGCCCTGTACAACCCCTCTGTCGCAGTGACTGTGC
TAGACCGAGACCCTCGTCGCATTCAGAGCTGGAAGTCGGCGCATCTGCCT
GTGCATGAACCTACGCTCTACAATGTGGTGCGGGCGACGCGCGATGGCTC
GGACGTGGCCCAGAGTGTTGGTAACGAAGGCTCCGTACACTCACGCCGAC
AGCCCAACCTCTTCTTCACATGCGACTCGACGACCATTGCAGACGCAGAC
ATGATCTTCTTGGCCGTCAACACTCCCACCAAGACCTTTGGCCTCGGCGC
CGGCAGAGCCACCGACATGACAGCCGTCGACGGCGCCGTGCAAGATATTG
CACGACACGCAAAGCCGGGAGCTATCATTGTCGAGAAGAGCACCGTGCCA
TGTGGTACAGCCGAGCGAGTGCGACAAACAGTGAGCTGCATCCTTCAATT
CCCCTAGGATCAGAAATGATACTAACAGAGCAGCTCTCCACCCTCCGCCC
TAACACCCCCTTCGAAGTCCTCTCCAACCCCGAATTCCTCTCCGAAGGCT
CCGCCATCGACAACCTCGTTAACCCAGACCGCGTCCTAATCGGCTCCTCA
GGAACAGCCCCAGGCCGGCGCGCAGCCCGCATGCTCGCGCACCTCTACTC
CTCCTGGGTCCCACCCACGCGCATCCTCCAAGTGAACGCCTGGTCATCAG
AGCTGGCCAAACTCGTCGCCAACGCTATGCTCGCCCAGCGCATCAGCAGC
ATCAACTCTATCAGCGCGATCTGCGAAAAGACCGGCGCCAAAGTCGACCA
AGTTGCGCGGGCCATCGGCATGGACGCGCGCATCGGTCCACAGTTCCTCA
AAGCAGGAGTAGGGTTCGGCGGATCCTGTTTCCGCAAAGACATCGCCAGT
CTGACCTATCTCGCTGAATCATTGGGGCTAGACGAAGTAGCGCACTACTG
GCGCCAGGTCAACGCTATGAACGAGTACCAGCGCGTACGGTTCGCAAGGA
GAGTCATCAACCGTTTCGATGGGAATCTGTCCGGGAGGAAGATTGCTGTG
CTGGGGTTCGCGTTTAAAAAGGATACGGGGGATACGCGCGAGTCGCCTGT
TGTTGACGTCATCAGGGTGTTGCTTGAGGAGAGGCCAGCTGAGATTGATA
TTTTTGATTTGTTCTGTCATGAGGAGGATATCCTGCGTGAACTGGAAGCT
GCCTGTGGGAAGGAGACTGTGGCTGCTAGGGTTAAGGTCCTGTCGGATCC
GTATTTGGCGTGTTCACAGGCTAATGCGGTTTTGGTCATGACGGATTGCG
ATCAGTTCAAGAATGGACGGAAGCGCAGTGGAGCGGGGCTTGGGGGTTCT
GCTCGCTCGGACTCGGAGGCGTATGAGAGTCTGGATGAGATGCTTTCCCC
GGCGCGCAAGGATGAGACGTGGGCGTTTCAGGGAGTTACGTATAGATTGA
CGCCGGAGGAAGGGTGTGGGAATGACTGCGCGGCGTGTCGGAGCTGGGCG
CCGCGGTCTGTGGCTGTGGCTAACGAGCCATTGGAGTGGGCGCGCATCGC
GTACAACCTGAAGGATCCGAAGTGGGTGTATGATGGACGGGGAAGTTTAG
ATGGGGCGGAGCTGGAGAGGTTGGGGGTGGAGTGTGAAGCTATTGGACGG
ATGTAA
back to top

Coding sequence (CDS) from alignment at ch7:4187635..4189940+

>KJC3_010722-T1 ID=KJC3_010722-T1|Name=KJC3_010722-T1|organism=Aspergillus niger KJC3|type=CDS|length=5589bp|location=Sequence derived from alignment at ch7:4187635..4189940+ (Aspergillus niger KJC3)
ATGGACCTCTCTTCTTCACCACGGAGCTCGCTTGAATGGAGTCTAGATGA
CAGTTCAACCTGTCCCACTACCCCCGCCTCTAGTCCGCTGTTTCGCGCCG
CAAAGGTGGACGATGTGCCCTCGTCGCATTGCACCTCTCCCACGGGAATC
TCAGGCACCCGGGGAGCCCACGATGCCGCGAGCGCCAATTCAACGTGCAT
TCTGGCGGACGATCGCGTAAAGAGCGTCTGTGTTGTGGGTGCAGGATACG
TGGGCGGACCAACCGCGGCTGTTCTCGCCCTGTACAACCCCTCTGTCGCA
GTGACTGTGCTAGACCGAGACCCTCGTCGCATTCAGAGCTGGAAGTCGGC
GCATCTGCCTGTGCATGAACCTACGCTCTACAATGTGGTGCGGGCGACGC
GCGATGGCTCGGACGTGGCCCAGAGTGTTGGTAACGAAGGCTCCGTACAC
TCACGCCGACAGCCCAACCTCTTCTTCACATGCGACTCGACGACCATTGC
AGACGCAGACATGATCTTCTTGGCCGTCAACACTCCCACCAAGACCTTTG
GCCTCGGCGCCGGCAGAGCCACCGACATGACAGCCGTCGACGGCGCCGTG
CAAGATATTGCACGACACGCAAAGCCGGGAGCTATCATTGTCGAGAAGAG
CACCGTGCCATGTGGTACAGCCGAGCGAGTGCGACAAACACTCTCCACCC
TCCGCCCTAACACCCCCTTCGAAGTCCTCTCCAACCCCGAATTCCTCTCC
GAAGGCTCCGCCATCGACAACCTCGTTAACCCAGACCGCGTCCTAATCGG
CTCCTCAGGAACAGCCCCAGGCCGGCGCGCAGCCCGCATGCTCGCGCACC
TCTACTCCTCCTGGGTCCCACCCACGCGCATCCTCCAAGTGAACGCCTGG
TCATCAGAGCTGGCCAAACTCGTCGCCAACGCTATGCTCGCCCAGCGCAT
CAGCAGCATCAACTCTATCAGCGCGATCTGCGAAAAGACCGGCGCCAAAG
TCGACCAAGTTGCGCGGGCCATCGGCATGGACGCGCGCATCGGTCCACAG
TTCCTCAAAGCAGGAGTAGGGTTCGGCGGATCCTGTTTCCGCAAAGACAT
CGCCAGTCTGACCTATCTCGCTGAATCATTGGGGCTAGACGAAGTAGCGC
ACTACTGGCGCCAGGTCAACGCTATGAACGAGTACCAGCGCGTACGGTTC
GCAAGGAGAGTCATCAACCGTTTCGATGGGAATCTGTCCGGGAGGAAGAT
TGCTGTGCTGGGGTTCGCGTTTAAAAAGGATACGGGGGATACGCGCGAGT
CGCCTGTTGTTGACGTCATCAGGGTGTTGCTTGAGGAGAGGCCAGCTGAG
ATTGATATTTTTGATTTGTTCTGTCATGAGGAGGATATCCTGCGTGAACT
GGAAGCTGCCTGTGGGAAGGAGACTGTGGCTGCTAGGGTTAAGGTCCTGT
CGGATCCGTATTTGGCGTGTTCACAGGCTAATGCGGTTTTGGTCATGACG
GATTGCGATCAGTTCAAGAATGGACGGAAGCGCAGTGGAGCGGGGCTTGG
GGGTTCTGCTCGCTCGGACTCGGAGGCGTATGAGAGTCTGGATGAGATGC
TTTCCCCGGCGCGCAAGGATGAGACGTGGGCGTTTCAGGGAGTTACGTAT
AGATTGACGCCGGAGGAAGGGTGTGGGAATGACTGCGCGGCGTGTCGGAG
CTGGGCGCCGCGGTCTGTGGCTGTGGCTAACGAGCCATTGGAGTGGGCGC
GCATCGCGTACAACCTGAAGGATCCGAAGTGGGTGTATGATGGACGGGGA
AGTTTAGATGGGGCGGAGCTGGAGAGGTTGGGGGTGGAGTGTGAAGCTAT
TGGACGGATGTAAATGGACCTCTCTTCTTCACCACGGAGCTCGCTTGAAT
GGAGTCTAGATGACAGTTCAACCTGTCCCACTACCCCCGCCTCTAGTCCG
CTGTTTCGCGCCGCAAAGGTGGACGATGTGCCCTCGTCGCATTGCACCTC
TCCCACGGGAATCTCAGGCACCCGGGGAGCCCACGATGCCGCGAGCGCCA
ATTCAACGTGCATTCTGGCGGACGATCGCGTAAAGAGCGTCTGTGTTGTG
GGTGCAGGATACGTGGGCGGACCAACCGCGGCTGTTCTCGCCCTGTACAA
CCCCTCTGTCGCAGTGACTGTGCTAGACCGAGACCCTCGTCGCATTCAGA
GCTGGAAGTCGGCGCATCTGCCTGTGCATGAACCTACGCTCTACAATGTG
GTGCGGGCGACGCGCGATGGCTCGGACGTGGCCCAGAGTGTTGGTAACGA
AGGCTCCGTACACTCACGCCGACAGCCCAACCTCTTCTTCACATGCGACT
CGACGACCATTGCAGACGCAGACATGATCTTCTTGGCCGTCAACACTCCC
ACCAAGACCTTTGGCCTCGGCGCCGGCAGAGCCACCGACATGACAGCCGT
CGACGGCGCCGTGCAAGATATTGCACGACACGCAAAGCCGGGAGCTATCA
TTGTCGAGAAGAGCACCGTGCCATGTGGTACAGCCGAGCGAGTGCGACAA
ACACTCTCCACCCTCCGCCCTAACACCCCCTTCGAAGTCCTCTCCAACCC
CGAATTCCTCTCCGAAGGCTCCGCCATCGACAACCTCGTTAACCCAGACC
GCGTCCTAATCGGCTCCTCAGGAACAGCCCCAGGCCGGCGCGCAGCCCGC
ATGCTCGCGCACCTCTACTCCTCCTGGGTCCCACCCACGCGCATCCTCCA
AGTGAACGCCTGGTCATCAGAGCTGGCCAAACTCGTCGCCAACGCTATGC
TCGCCCAGCGCATCAGCAGCATCAACTCTATCAGCGCGATCTGCGAAAAG
ACCGGCGCCAAAGTCGACCAAGTTGCGCGGGCCATCGGCATGGACGCGCG
CATCGGTCCACAGTTCCTCAAAGCAGGAGTAGGGTTCGGCGGATCCTGTT
TCCGCAAAGACATCGCCAGTCTGACCTATCTCGCTGAATCATTGGGGCTA
GACGAAGTAGCGCACTACTGGCGCCAGGTCAACGCTATGAACGAGTACCA
GCGCGTACGGTTCGCAAGGAGAGTCATCAACCGTTTCGATGGGAATCTGT
CCGGGAGGAAGATTGCTGTGCTGGGGTTCGCGTTTAAAAAGGATACGGGG
GATACGCGCGAGTCGCCTGTTGTTGACGTCATCAGGGTGTTGCTTGAGGA
GAGGCCAGCTGAGATTGATATTTTTGATTTGTTCTGTCATGAGGAGGATA
TCCTGCGTGAACTGGAAGCTGCCTGTGGGAAGGAGACTGTGGCTGCTAGG
GTTAAGGTCCTGTCGGATCCGTATTTGGCGTGTTCACAGGCTAATGCGGT
TTTGGTCATGACGGATTGCGATCAGTTCAAGAATGGACGGAAGCGCAGTG
GAGCGGGGCTTGGGGGTTCTGCTCGCTCGGACTCGGAGGCGTATGAGAGT
CTGGATGAGATGCTTTCCCCGGCGCGCAAGGATGAGACGTGGGCGTTTCA
GGGAGTTACGTATAGATTGACGCCGGAGGAAGGGTGTGGGAATGACTGCG
CGGCGTGTCGGAGCTGGGCGCCGCGGTCTGTGGCTGTGGCTAACGAGCCA
TTGGAGTGGGCGCGCATCGCGTACAACCTGAAGGATCCGAAGTGGGTGTA
TGATGGACGGGGAAGTTTAGATGGGGCGGAGCTGGAGAGGTTGGGGGTGG
AGTGTGAAGCTATTGGACGGATGTAAATGGACCTCTCTTCTTCACCACGG
AGCTCGCTTGAATGGAGTCTAGATGACAGTTCAACCTGTCCCACTACCCC
CGCCTCTAGTCCGCTGTTTCGCGCCGCAAAGGTGGACGATGTGCCCTCGT
CGCATTGCACCTCTCCCACGGGAATCTCAGGCACCCGGGGAGCCCACGAT
GCCGCGAGCGCCAATTCAACGTGCATTCTGGCGGACGATCGCGTAAAGAG
CGTCTGTGTTGTGGGTGCAGGATACGTGGGCGGACCAACCGCGGCTGTTC
TCGCCCTGTACAACCCCTCTGTCGCAGTGACTGTGCTAGACCGAGACCCT
CGTCGCATTCAGAGCTGGAAGTCGGCGCATCTGCCTGTGCATGAACCTAC
GCTCTACAATGTGGTGCGGGCGACGCGCGATGGCTCGGACGTGGCCCAGA
GTGTTGGTAACGAAGGCTCCGTACACTCACGCCGACAGCCCAACCTCTTC
TTCACATGCGACTCGACGACCATTGCAGACGCAGACATGATCTTCTTGGC
CGTCAACACTCCCACCAAGACCTTTGGCCTCGGCGCCGGCAGAGCCACCG
ACATGACAGCCGTCGACGGCGCCGTGCAAGATATTGCACGACACGCAAAG
CCGGGAGCTATCATTGTCGAGAAGAGCACCGTGCCATGTGGTACAGCCGA
GCGAGTGCGACAAACACTCTCCACCCTCCGCCCTAACACCCCCTTCGAAG
TCCTCTCCAACCCCGAATTCCTCTCCGAAGGCTCCGCCATCGACAACCTC
GTTAACCCAGACCGCGTCCTAATCGGCTCCTCAGGAACAGCCCCAGGCCG
GCGCGCAGCCCGCATGCTCGCGCACCTCTACTCCTCCTGGGTCCCACCCA
CGCGCATCCTCCAAGTGAACGCCTGGTCATCAGAGCTGGCCAAACTCGTC
GCCAACGCTATGCTCGCCCAGCGCATCAGCAGCATCAACTCTATCAGCGC
GATCTGCGAAAAGACCGGCGCCAAAGTCGACCAAGTTGCGCGGGCCATCG
GCATGGACGCGCGCATCGGTCCACAGTTCCTCAAAGCAGGAGTAGGGTTC
GGCGGATCCTGTTTCCGCAAAGACATCGCCAGTCTGACCTATCTCGCTGA
ATCATTGGGGCTAGACGAAGTAGCGCACTACTGGCGCCAGGTCAACGCTA
TGAACGAGTACCAGCGCGTACGGTTCGCAAGGAGAGTCATCAACCGTTTC
GATGGGAATCTGTCCGGGAGGAAGATTGCTGTGCTGGGGTTCGCGTTTAA
AAAGGATACGGGGGATACGCGCGAGTCGCCTGTTGTTGACGTCATCAGGG
TGTTGCTTGAGGAGAGGCCAGCTGAGATTGATATTTTTGATTTGTTCTGT
CATGAGGAGGATATCCTGCGTGAACTGGAAGCTGCCTGTGGGAAGGAGAC
TGTGGCTGCTAGGGTTAAGGTCCTGTCGGATCCGTATTTGGCGTGTTCAC
AGGCTAATGCGGTTTTGGTCATGACGGATTGCGATCAGTTCAAGAATGGA
CGGAAGCGCAGTGGAGCGGGGCTTGGGGGTTCTGCTCGCTCGGACTCGGA
GGCGTATGAGAGTCTGGATGAGATGCTTTCCCCGGCGCGCAAGGATGAGA
CGTGGGCGTTTCAGGGAGTTACGTATAGATTGACGCCGGAGGAAGGGTGT
GGGAATGACTGCGCGGCGTGTCGGAGCTGGGCGCCGCGGTCTGTGGCTGT
GGCTAACGAGCCATTGGAGTGGGCGCGCATCGCGTACAACCTGAAGGATC
CGAAGTGGGTGTATGATGGACGGGGAAGTTTAGATGGGGCGGAGCTGGAG
AGGTTGGGGGTGGAGTGTGAAGCTATTGGACGGATGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000271polysaccharide biosynthetic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0003979UDP-glucose 6-dehydrogenase activity
GO:0051287NAD binding
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010722KJC3_010722Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010722-T1.utr5p1KJC3_010722-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010722-T1.exon1KJC3_010722-T1.exon1Aspergillus niger KJC3exon
KJC3_010722-T1.exon2KJC3_010722-T1.exon2Aspergillus niger KJC3exon
KJC3_010722-T1.exon3KJC3_010722-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010722-T1.cdsKJC3_010722-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010722-T1KJC3_010722-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008927
DBxrefInterPro:IPR036220
DBxrefInterPro:IPR001732
DBxrefInterPro:IPR014026
DBxrefInterPro:IPR028357
DBxrefInterPro:IPR017476
DBxrefInterPro:IPR014027
DBxrefPFAM:PF03721
DBxrefPFAM:PF03720
DBxrefPFAM:PF00984
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:4187635..4189940 +
Powered by Drupal