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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:4196602..4199091- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010729-T1 ID=KJC3_010729-T1|Name=KJC3_010729-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2490bp|location=Sequence derived from alignment at ch7:4196602..4199091- (Aspergillus niger KJC3)
GTCGATCTCTTCATTGATTAGGAACAGTAATCATTATCCGGGAATGTCGT
TATCGCTCCCGACAGGACAGGGCCACGAATGTGCTCTTCCTTTCAACAAA
GTCTCTCGAAACCCAGATTGACGGGATCCATTCACCACGGCCTGCCGGGT
TGACTGTGGCAGCCAAACTTCCCAACTTCTCGACCCCGGATGCGCCGGTA
GCACGGAGCAACGGCCATCATTGGAGGCTGACAAGCAATTGCCCCCCCAC
GTCCCTTGGCTGGATCCATTTTTACTGAAATAAGTAAGGATTACATAGTC
GAGTTGAGGGTCCTGCATTTGTCAGTTTGTCAGCGTCCCCAGGCCTGCCT
CGTCCGCTCGCGGAATCGGCATCCCCTCTCCCCCTTCCTCTTCCTATGGT
TTCCCTGCAAGCTTAATCCTTCCTTCTTCTTGTCAATGTAACGGCCACTC
GATGGCCCTCCGGTTCTCTGCCTTAAGCTGGAGGTAGTGGCTTAACTGTA
GATTTTCCAAATACTGTGCGGTTGGGACTTATCAGAGGATTCCTATCGCA
TGTCGCAAACAGCATGCCCCACGATGGTTGGGCGGACGAAGGCGCAAAAG
ATGCCTTCATTGGAGACTGACACCATTATCGTCGGTATGTCGCCATTTCG
TGCCAACAGAGATGCTAGATTTTTACTTTTAATTCTCCCCCCTGGTCCGT
GTTATCGTGCTGATGTGATCCCCCACAGGGAACGGGCCGTCGGCCATGAT
CTTGTCGTATATTCTTCATGGCCATCTTCCATACTACTGCTCCAATCCTC
CCCATCCTGATCCGCTTCTGCATGCGAAGCTCCAGGGTTCCCCGGAGTTG
CTCCATGTGGACGTGCACGCTTTGACGGATCATTTCGCCGCCTCGAGACT
GTCGTACTCCACACAGGCTCTCCCCGTGAACGTGCTCCTGGACACGCTGG
TGCGCCCCAGCGTGGATGTAGAGGAGCTGGAAGCCATCACGAATGTCGAA
TGGCGGTTCGTGCCCGAAAAGGCCGTTCCCCATTTGGTGTTCGGGAATGC
TCAGCATGCAGGGGGTCAGTGGACTGATAATCCCGTGCCTGCCAGCTGGG
ACATCCAGACCCTAAGCTATGCGTCGATGCTGTCTCTCCCGGGCTATTCG
TTTGCTGAGCACCACCGGAAGATTACGGGCAAGGAGCTTCCGGCATATAC
CCGACCCAGTCGGGAAGAAACAGCAAGTTACTTCCGTACGTACCCCGAGG
CGGTTCAGATCGACGACGTGTTCCGGTTCAATGAAACCATATCCGGCATC
TCACGAATAGGCGATGGGTTTTACATCCACTCGCACAACATACACTGCAA
GCATCTGGTCCTGGCTAGTGGTATATTCACTCAAGTGCTCCAGCCTAGTC
CAATGCTGCAGCCTTTGACGTCACTCCAGCCCACTCCGCAGACCCCGCTG
CTGGTGATCGGCTCTGGGTTCTCTGCTGCGGATATAATCATCTCTGCGCC
GGCGGATCAGAAAATCATCCATGTGTTCAAATGGGATCCGGAAGGGCGGT
CGTCACCGCTGCGTGGCTGCCATCACCAAGCATATCCCGAATACGCCGGA
GTTTATCGACTGATGAAACGAGCTGCCGTTGCAGCAGACCCTACGAAGAA
GCGAGTAAAGCCGCGACGCACTACCTCGATCCCTTTTCTAGAACTTCGCT
CGTGGGAAGATATATACGAAGGATTGCCCAACTCGGAAGTTGTCGACGTT
GAGATGCAAGAGGACCAGGCCCTCGTTACATTCCGCCAGCCTGACGGGAG
CACCATCACCCGTGCCGTCCGCGGGATGGTCTATGCCACTGGCCGACGAG
GCACCCTCGACTACCTCGACCGTCCTCTCCTCAACGAAGTACTCGACCAC
GATGCGACCACAGAAACGAGTCCAATCATCTCTGCCCGGTCTTTGCGCAG
CAATGTATATGAGGATATAGAGATCGCGCCAGACGTGTTCATCATCGGCA
GCCTCACAGGCGACTCTCTCATTCGCTTTGCGTACGGCAGCTGCGTCCAG
GCTGCCGGGAAGTTGGTCGACGCACGCACAGGCAAGGAGCGAGTTCGCAG
TGGATCGAACAATACCTCTCGGCCTCAGTCATCGTTGGGGGTCATGCGTG
GCATAGATGGACACGATATCTCGCCACCTAGCGAGTTTCGTGCTGTGGAT
AACGACTGCATGGCGTCGACTTGGCCGCAGAGGGTTATGCCGAATGGCTT
GTGGAGATGGCTCTGGAGATGGTTTGACGTGAGGTGATTGATGACAAATG
ATGCATGATAGATGATAGATGTGATGATGATTGTACATAGCATGTCATTG
GTTTTGTTTATAAAGGGAGGATATGTCGTTATTCATGTATAGTTGGCTGA
GTTGTTTCATTGATTATGCATATATCTTGACTGTCAGAGAACTATTCTGT
ATCACTTCCAGTAAAAAATCTTTCATTATGACAATCCACC back to topCoding sequence (CDS) from alignment at ch7:4196602..4199091- >KJC3_010729-T1 ID=KJC3_010729-T1|Name=KJC3_010729-T1|organism=Aspergillus niger KJC3|type=CDS|length=3288bp|location=Sequence derived from alignment at ch7:4196602..4199091- (Aspergillus niger KJC3)
GGAACGGGCCGTCGGCCATGATCTTGTCGTATATTCTTCATGGCCATCTT
CCATACTACTGCTCCAATCCTCCCCATCCTGATCCGCTTCTGCATGCGAA
GCTCCAGGGTTCCCCGGAGTTGCTCCATGTGGACGTGCACGCTTTGACGG
ATCATTTCGCCGCCTCGAGACTGTCGTACTCCACACAGGCTCTCCCCGTG
AACGTGCTCCTGGACACGCTGGTGCGCCCCAGCGTGGATGTAGAGGAGCT
GGAAGCCATCACGAATGTCGAATGGCGGTTCGTGCCCGAAAAGGCCGTTC
CCCATTTGGTGTTCGGGAATGCTCAGCATGCAGGGGGTCAGTGGACTGAT
AATCCCGTGCCTGCCAGCTGGGACATCCAGACCCTAAGCTATGCGTCGAT
GCTGTCTCTCCCGGGCTATTCGTTTGCTGAGCACCACCGGAAGATTACGG
GCAAGGAGCTTCCGGCATATACCCGACCCAGTCGGGAAGAAACAGCAAGT
TACTTCCGTACGTACCCCGAGGCGGTTCAGATCGACGACGTGTTCCGGTT
CAATGAAACCATATCCGGCATCTCACGAATAGGCGATGGGTTTTACATCC
ACTCGCACAACATACACTGCAAGCATCTGGTCCTGGCTAGTGGTATATTC
ACTCAAGTGCTCCAGCCTAGTCCAATGCTGCAGCCTTTGACGTCACTCCA
GCCCACTCCGCAGACCCCGCTGCTGGTGATCGGCTCTGGGTTCTCTGCTG
CGGATATAATCATCTCTGCGCCGGCGGATCAGAAAATCATCCATGTGTTC
AAATGGGATCCGGAAGGGCGGTCGTCACCGCTGCGTGGCTGCCATCACCA
AGCATATCCCGAATACGCCGGAGTTTATCGACTGATGAAACGAGCTGCCG
TTGCAGCAGACCCTACGAAGAAGCGAGTAAAGCCGCGACGCACTACCTCG
ATCCCTTTTCTAGAACTTCGCTCGTGGGAAGATATATACGAAGGATTGCC
CAACTCGGAAGTTGTCGACGTTGAGATGCAAGAGGACCAGGCCCTCGTTA
CATTCCGCCAGCCTGACGGGAGCACCATCACCCGTGCCGTCCGCGGGATG
GTCTATGCCACTGGCCGACGAGGCACCCTCGACTACCTCGACCGTCCTCT
CCTCAACGAAGTACTCGACCACGATGCGACCACAGAAACGAGTCCAATCA
TCTCTGCCCGGTCTTTGCGCAGCAATGTATATGAGGATATAGAGATCGCG
CCAGACGTGTTCATCATCGGCAGCCTCACAGGCGACTCTCTCATTCGCTT
TGCGTACGGCAGCTGCGTCCAGGCTGCCGGGAAGTTGGTCGACGCACGCA
CAGGCAAGGAGCGAGTTCGCAGTGGATCGAACAATACCTCTCGGCCTCAG
TCATCGTTGGGGGTCATGCGTGGCATAGATGGACACGATATCTCGCCACC
TAGCGAGTTTCGTGCTGTGGATAACGACTGCATGGCGTCGACTTGGCCGC
AGAGGGTTATGCCGAATGGCTTGTGGAGATGGCTCTGGAGATGGTTTGAC
GTGAGGTGAATGTCGCAAACAGCATGCCCCACGATGGTTGGGCGGACGAA
GGCGCAAAAGATGCCTTCATTGGAGACTGACACCATTATCGTCGGGAACG
GGCCGTCGGCCATGATCTTGTCGTATATTCTTCATGGCCATCTTCCATAC
TACTGCTCCAATCCTCCCCATCCTGATCCGCTTCTGCATGCGAAGCTCCA
GGGTTCCCCGGAGTTGCTCCATGTGGACGTGCACGCTTTGACGGATCATT
TCGCCGCCTCGAGACTGTCGTACTCCACACAGGCTCTCCCCGTGAACGTG
CTCCTGGACACGCTGGTGCGCCCCAGCGTGGATGTAGAGGAGCTGGAAGC
CATCACGAATGTCGAATGGCGGTTCGTGCCCGAAAAGGCCGTTCCCCATT
TGGTGTTCGGGAATGCTCAGCATGCAGGGGGTCAGTGGACTGATAATCCC
GTGCCTGCCAGCTGGGACATCCAGACCCTAAGCTATGCGTCGATGCTGTC
TCTCCCGGGCTATTCGTTTGCTGAGCACCACCGGAAGATTACGGGCAAGG
AGCTTCCGGCATATACCCGACCCAGTCGGGAAGAAACAGCAAGTTACTTC
CGTACGTACCCCGAGGCGGTTCAGATCGACGACGTGTTCCGGTTCAATGA
AACCATATCCGGCATCTCACGAATAGGCGATGGGTTTTACATCCACTCGC
ACAACATACACTGCAAGCATCTGGTCCTGGCTAGTGGTATATTCACTCAA
GTGCTCCAGCCTAGTCCAATGCTGCAGCCTTTGACGTCACTCCAGCCCAC
TCCGCAGACCCCGCTGCTGGTGATCGGCTCTGGGTTCTCTGCTGCGGATA
TAATCATCTCTGCGCCGGCGGATCAGAAAATCATCCATGTGTTCAAATGG
GATCCGGAAGGGCGGTCGTCACCGCTGCGTGGCTGCCATCACCAAGCATA
TCCCGAATACGCCGGAGTTTATCGACTGATGAAACGAGCTGCCGTTGCAG
CAGACCCTACGAAGAAGCGAGTAAAGCCGCGACGCACTACCTCGATCCCT
TTTCTAGAACTTCGCTCGTGGGAAGATATATACGAAGGATTGCCCAACTC
GGAAGTTGTCGACGTTGAGATGCAAGAGGACCAGGCCCTCGTTACATTCC
GCCAGCCTGACGGGAGCACCATCACCCGTGCCGTCCGCGGGATGGTCTAT
GCCACTGGCCGACGAGGCACCCTCGACTACCTCGACCGTCCTCTCCTCAA
CGAAGTACTCGACCACGATGCGACCACAGAAACGAGTCCAATCATCTCTG
CCCGGTCTTTGCGCAGCAATGTATATGAGGATATAGAGATCGCGCCAGAC
GTGTTCATCATCGGCAGCCTCACAGGCGACTCTCTCATTCGCTTTGCGTA
CGGCAGCTGCGTCCAGGCTGCCGGGAAGTTGGTCGACGCACGCACAGGCA
AGGAGCGAGTTCGCAGTGGATCGAACAATACCTCTCGGCCTCAGTCATCG
TTGGGGGTCATGCGTGGCATAGATGGACACGATATCTCGCCACCTAGCGA
GTTTCGTGCTGTGGATAACGACTGCATGGCGTCGACTTGGCCGCAGAGGG
TTATGCCGAATGGCTTGTGGAGATGGCTCTGGAGATGGTTTGACGTGAGG
TGAATGTCGCAAACAGCATGCCCCACGATGGTTGGGCGGACGAAGGCGCA
AAAGATGCCTTCATTGGAGACTGACACCATTATCGTCG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010729-T1.utr3p1 | KJC3_010729-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010729-T1.utr5p1 | KJC3_010729-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036188 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:4196602..4199091 - |
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