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KJC3_010730-T1, KJC3_010730-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010730-T1
Unique NameKJC3_010730-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:4199109..4200700+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010730-T1 ID=KJC3_010730-T1|Name=KJC3_010730-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1592bp|location=Sequence derived from alignment at ch7:4199109..4200700+ (Aspergillus niger KJC3)
GTTGCGGGGTCTGCCTCTTCAGGAAGGTAGGGCTTGGGGCCTGCACCATA
TCTACCCTATACCCTACCTTCCTGTTCGAGACGCGGCTGACGCGTGGAAC
CCCCAGGCCATCAATCTATCGCCATCGGCGCTGGCCAGGGTCCCTCCCAA
TCGAAGCGCAAAAGACAAATCAAGCAGCAGGTGGAATATCTCAAGAATCC
AGCCTTCTGCTGCTGCCATGATTCTGTTACCTGAGCTGTCGTCCCGCCGG
TTCTAATTGGAATTCCGAGGCTGCGTCCACCGGAGGTTATCTGGTCTAGT
CTCCGCAGTCCTTCTCCGCAACCATGTATCATCTGGCCAAGTCCCTGTAT
ATGTACGCTACTAGCAAGGAGGGTGAGTAGATGTCTTTATCCTAATCCCA
TCCTCGCGCACTAATATTATGATAATAGAATACTCCGTACTCCTCCTTGG
CCTTGATAATGCCGGCAAAACTACCCTCCTGTCGCAAATCAAAGCCCTCT
ATCAACCCCGACCAGATGGCGCTCCCGCCCCTAACCCCGGCAAAACCGTG
CCCACGGTCGGCCAAAACGTCGCGACCATCTCCTTACCGGACATGTATCT
GAAGATCTGGGATGTGGGGGGACAGATCTCCATGCGGAATCTCTGGCAAA
GCTACTACACCAGCTGCCATGCCATTATCTTCGTCGTCGACAGTGCCGAC
GTCGGACAAGACCCAGATATCACCCGGCTCCCTAGTCGGCGGCCTAGCTC
TGCGTCCGGTCCATCAGGAGGCCACTCGGGCGCATTCACCGAGGAAATGG
TCGGGATCAATGCGCCCGGGAGCGATTTCGGTCGGCTCGACGAGTGTCGG
CAAGTGCTGGAGTCGGTTCTGCAGCATTCGGATGTGGCGGGTGTGCCGAT
TCTCGTGCTTGCCAATAAGCAAGATCGCGAGGATTCGGTGGAGGTTGTCC
GTATCAAGGAGGGATTCGTGCGCAAGGTCTTCGAGGGAGAGTCTGGGGCC
GGGGTGAGGGATAGTCGTGTGTTGCCGGTCAGCGCGTTGATGGGGTCGGG
GGTGCAAGAAGCGGTGGAGTGGGTGCAAACGCGAGTCAAGTGGAATAAAG
AGGGACGGCCGCCGTTAATGAAGTGATAGACTTGGGAAGATGGTCTGTTG
CGAAGATTTCGATTCTTTTCATGTTCCTTCATCGTGTCATTCGGGCTTGA
GTTCTGGCGTCAAGAGGTTATGTGAATTGGGAAGATACCTTGATTGCATT
TGTTTTTTTACTTTGGTCTTTATCCAGTTGGCTTTCGCTGTAACTGTCAT
ACATAAGCGCATGTTGTACCTCAACCATGTAGACAGCTATCCATCCAGCA
ATGACCATACCCCAGTACAACACACACAGAACAAAGCATCAACACTGCAA
AGCACCTACTACATCATCATCAACTCCAAGGCCTAGATCAAAACAAACTG
CCAATTCCATGCACCGGCATCTGACGAAGACGCCCCCCATCATGCAATCT
ATCCCACTATAACGGATGCTGCAGAGTTACCGCCAAACCCATGGAAGCAC
ACGACCAAAAACCGGACTGATTGGACGCACTGAACATTCTCG
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Coding sequence (CDS) from alignment at ch7:4199109..4200700+

>KJC3_010730-T1 ID=KJC3_010730-T1|Name=KJC3_010730-T1|organism=Aspergillus niger KJC3|type=CDS|length=1494bp|location=Sequence derived from alignment at ch7:4199109..4200700+ (Aspergillus niger KJC3)
ATGTATCATCTGGCCAAGTCCCTGTATATGTACGCTACTAGCAAGGAGGA
ATACTCCGTACTCCTCCTTGGCCTTGATAATGCCGGCAAAACTACCCTCC
TGTCGCAAATCAAAGCCCTCTATCAACCCCGACCAGATGGCGCTCCCGCC
CCTAACCCCGGCAAAACCGTGCCCACGGTCGGCCAAAACGTCGCGACCAT
CTCCTTACCGGACATGTATCTGAAGATCTGGGATGTGGGGGGACAGATCT
CCATGCGGAATCTCTGGCAAAGCTACTACACCAGCTGCCATGCCATTATC
TTCGTCGTCGACAGTGCCGACGTCGGACAAGACCCAGATATCACCCGGCT
CCCTAGTCGGCGGCCTAGCTCTGCGTCCGGTCCATCAGGAGGCCACTCGG
GCGCATTCACCGAGGAAATGGTCGGGATCAATGCGCCCGGGAGCGATTTC
GGTCGGCTCGACGAGTGTCGGCAAGTGCTGGAGTCGGTTCTGCAGCATTC
GGATGTGGCGGGTGTGCCGATTCTCGTGCTTGCCAATAAGCAAGATCGCG
AGGATTCGGTGGAGGTTGTCCGTATCAAGGAGGGATTCGTGCGCAAGGTC
TTCGAGGGAGAGTCTGGGGCCGGGGTGAGGGATAGTCGTGTGTTGCCGGT
CAGCGCGTTGATGGGGTCGGGGGTGCAAGAAGCGGTGGAGTGGGTGCAAA
CGCGAGTCAAGTGGAATAAAGAGGGACGGCCGCCGTTAATGAAGTGAATG
TATCATCTGGCCAAGTCCCTGTATATGTACGCTACTAGCAAGGAGGAATA
CTCCGTACTCCTCCTTGGCCTTGATAATGCCGGCAAAACTACCCTCCTGT
CGCAAATCAAAGCCCTCTATCAACCCCGACCAGATGGCGCTCCCGCCCCT
AACCCCGGCAAAACCGTGCCCACGGTCGGCCAAAACGTCGCGACCATCTC
CTTACCGGACATGTATCTGAAGATCTGGGATGTGGGGGGACAGATCTCCA
TGCGGAATCTCTGGCAAAGCTACTACACCAGCTGCCATGCCATTATCTTC
GTCGTCGACAGTGCCGACGTCGGACAAGACCCAGATATCACCCGGCTCCC
TAGTCGGCGGCCTAGCTCTGCGTCCGGTCCATCAGGAGGCCACTCGGGCG
CATTCACCGAGGAAATGGTCGGGATCAATGCGCCCGGGAGCGATTTCGGT
CGGCTCGACGAGTGTCGGCAAGTGCTGGAGTCGGTTCTGCAGCATTCGGA
TGTGGCGGGTGTGCCGATTCTCGTGCTTGCCAATAAGCAAGATCGCGAGG
ATTCGGTGGAGGTTGTCCGTATCAAGGAGGGATTCGTGCGCAAGGTCTTC
GAGGGAGAGTCTGGGGCCGGGGTGAGGGATAGTCGTGTGTTGCCGGTCAG
CGCGTTGATGGGGTCGGGGGTGCAAGAAGCGGTGGAGTGGGTGCAAACGC
GAGTCAAGTGGAATAAAGAGGGACGGCCGCCGTTAATGAAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010730KJC3_010730Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010730-T1KJC3_010730-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010730-T1.utr5p1KJC3_010730-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_010730-T1.utr5p2KJC3_010730-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010730-T1.exon1KJC3_010730-T1.exon1Aspergillus niger KJC3exon
KJC3_010730-T1.exon2KJC3_010730-T1.exon2Aspergillus niger KJC3exon
KJC3_010730-T1.exon3KJC3_010730-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010730-T1.cdsKJC3_010730-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010730-T1.utr3p1KJC3_010730-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR006689
DBxrefPFAM:PF08477
DBxrefPFAM:PF01926
DBxrefPFAM:PF00025
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:4199109..4200700 +
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