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KJC3_010733-T1, KJC3_010733-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010733-T1
Unique NameKJC3_010733-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:4203820..4206611+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010733-T1 ID=KJC3_010733-T1|Name=KJC3_010733-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2792bp|location=Sequence derived from alignment at ch7:4203820..4206611+ (Aspergillus niger KJC3)
CCGACCCAACCTTGCAGTCCCCTTTTCCCTTGTCAACCTCGCGCTGACCC
TGCGCTACCGCCGCGATCATGGCCGGTGATCGCTCTTCATCTCACGATCC
TGCCCGCATAAGCTCAGGAACTCCGTCGAGCGCCAAGAAGTCCCAAAAAA
GAAAGAGAGATCTTGATGGCTCCGCCACCGCTATATCCACACCGACCCCG
ACCAAGAAATCCAAGAAGAATCAGGGTTCTCCATCCAACGATACCCCAGT
CAAAGAAAGCCGGAAGAAGAAAAAGCACTCGGGAGCTGCAAGCCGCAGTG
CTGTTCAAGAGACTTCGCCCCAGAAAGAGAGTGCTGTCTCGCCGGTCGGC
GGCCAAACGACTACTGCAAACCAAGACGACAGCCTCACTAAGAAAAAGAA
GAAGTCGAAGGATGGAAAGCGGAAAAGCGGAACAATTAGCGATGCAGTTG
AGGGAGATGTCGATATGAAGGATGCGGACGACTCTGAAGAAGTTAAAGAG
GAACAAGCCAAAGGGACAAAGAAAGGCCGAAAGAGTTCTGAGCCCGCAGC
GACAGAGAATGACGACGACAAACCTACGAAGAACAAATTTGCCGGCATCC
TGTCCAAGTTTGAGAGGTCGAAGAAAGCACGGGAGCTGGAAAAGACAAGA
GAAAGCACGAAGGATGAAGATTCCACTGAGCCAACGACAGCAGAGCCAGT
TATAGCACAAGGTCTGGAGCCGTTACCACAACCAGAGGCAGCGCCTGAGC
AGGATGAGATGCCAACTTACTCCTCGCTGCCGCCGTGGCTGGCCAATCCC
CTCCGTGCATCGGCTCAGGAACGACGCAAATTCGCCGATTTAGGAATCGA
CTCTAGCCTCCTCCGAGTTCTGGAAGACAACGGCTATCGTGAAGCATTTG
CCGTGCAGTCAACCGTCATTCCTCTCCTCCTGCAAGGACCTACGAACCAC
CCAGGAGACCTTTGCATCTCCGCCGCTACTGGTTCAGGAAAAACTTTGTC
CTACGTTCTACCATTGGTCACGGCCTTGAAGCCGCTCCCTGCGCCTCGGT
TACGAGGACTCATCGTGGTACCTACTCGAGAGCTGGTGAAGCAGGCCAGA
GAAGCTTGTGAACTCTGTGCCGCTGGATCCGGCCTCCGCGTCGCGTCGGC
AGTTGGAAACGTTGCGATCAAAGACGAGCAGCGGTCGTTGATGCGCGTTG
ATCAGGTCTATGGCCCTGCGACATTCAAGCTTCGCCAGAACGTGCAACTG
ACAGGTGATGATTGGACGAACTTCAATTTGCAGGACTACATCTCAGACGC
TGGTGATCTAAGCGAGTCTCTGCCAGGCTACGTTCACCGGTCAGAGCCTA
ATGTCGACATCTTAATCTGTACTCCCGGTCGTCTGGTCGATCATCTTCGC
TATACCAAAGGTTTCACTCTTAAGAATCTCGAATGGCTTGTCATTGACGA
GGCAGATCGACTACTAAATGAAAGTTTCCAGGAATGGGTGGACGTCGTGA
TGACCTCCCTGGACGCCCGGAAAGCCCCTGATGCATTCGGGTTTAGTGGA
AACTTTCTGTCCGGGCTTGGCTTGCCGATCCAAAGCAAGGAACCAAGGAA
AGTCGTTTTGAGTGCCACTATGACTAGAGATGTGACGAAGCTTAACTCTC
TGCGTCTTGCGAACCCCAAGCTAGTCGTCATCGGCTCCGATGCCGCTGCA
ACAGAAGATGAGAGCGGTGGCGTTGCACCGTCAGACGAACAGTTTACGCT
CCCGCCTACCCTAGAGGAGCACACCGTATCGGTTGGAGATGGGTCGCAGA
AGCCGCTTTATCTCCTGCGCCTTCTGCTGTCCCACATCAAGCTTGAGACT
AAGAGTATCAAGCCTTCTGTGCACGACGCTTCTGAATCTGATGATTCTGA
TTCCGACGAATCAAGCTCTGAATCGGATTCCGATGACGCGTCGGACGTGT
CTAGCTCTGAAGATTCCGATTCCGACTCAGACTCGGATTCTGACTCTGAT
ACAAGTTCTGACTCGTCCACAGACTCTGAGGATACCTCGGAGGACGAGTC
GAGCGATGATTCAGAGTCGTCGGACAGCGATTCTGAATCAGAGGACGAAA
AGTCGGACCGACAAGGGCCTTCGCAGACCACAGTTCTGGTCTTCACGAAG
TCATCTGAATCCGCATCACGACTGGCTCGCCTGTTGGCACTCCTCGAACC
CTCCCTCTCTGACCGCATTGGCACGATCATTAAATCCAACAAATCGTCCG
CTTCGCGCAAGACCCTCACAGCTTACCGCCGGGGCAAGATCTCCGTGATT
ATTGCAACGGACCGGGCCTCGCGTGGTCTAGACCTACGGTCACTGACCCA
TGTTGTCAACTACGATGTGCCAGCTAGCATTACTACCTACGTGCACCGAG
TTGGTCGTACAGCTCGAGCTGGTCAGAAAGGATCGGCATGGACGCTTGTG
GCACACCGAGAGGGCAAGTGGTTCGCAAGCCAGATCGCCAAGGGCTCGGA
TGGAAAGATCACTCGGTCCACCAAGGTTGGAAAGGTGCAATTCAAATTGG
ACAATATGAAGGAGGTCAAGGCACGCTATGCATCTGCATTGGACCTGCTG
GAGAAGGAAGTGAAGACGGGTGGGACTAAGGCCTCCAAGCCCAGCGCACA
ATGACATTGATGTTAGGTAGTTCTCGGACAAAGTGTATATAGTTATCCCG
AACACATGCAGGCCAGTCTGGTGACCCTTTCGTCTTGAAAGAGTGGCCCG
GGCTGAATACATAACTATCAAAACCCGCCGCAGATCATGCTC
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Coding sequence (CDS) from alignment at ch7:4203820..4206611+

>KJC3_010733-T1 ID=KJC3_010733-T1|Name=KJC3_010733-T1|organism=Aspergillus niger KJC3|type=CDS|length=2586bp|location=Sequence derived from alignment at ch7:4203820..4206611+ (Aspergillus niger KJC3)
ATGGCCGGTGATCGCTCTTCATCTCACGATCCTGCCCGCATAAGCTCAGG
AACTCCGTCGAGCGCCAAGAAGTCCCAAAAAAGAAAGAGAGATCTTGATG
GCTCCGCCACCGCTATATCCACACCGACCCCGACCAAGAAATCCAAGAAG
AATCAGGGTTCTCCATCCAACGATACCCCAGTCAAAGAAAGCCGGAAGAA
GAAAAAGCACTCGGGAGCTGCAAGCCGCAGTGCTGTTCAAGAGACTTCGC
CCCAGAAAGAGAGTGCTGTCTCGCCGGTCGGCGGCCAAACGACTACTGCA
AACCAAGACGACAGCCTCACTAAGAAAAAGAAGAAGTCGAAGGATGGAAA
GCGGAAAAGCGGAACAATTAGCGATGCAGTTGAGGGAGATGTCGATATGA
AGGATGCGGACGACTCTGAAGAAGTTAAAGAGGAACAAGCCAAAGGGACA
AAGAAAGGCCGAAAGAGTTCTGAGCCCGCAGCGACAGAGAATGACGACGA
CAAACCTACGAAGAACAAATTTGCCGGCATCCTGTCCAAGTTTGAGAGGT
CGAAGAAAGCACGGGAGCTGGAAAAGACAAGAGAAAGCACGAAGGATGAA
GATTCCACTGAGCCAACGACAGCAGAGCCAGTTATAGCACAAGGTCTGGA
GCCGTTACCACAACCAGAGGCAGCGCCTGAGCAGGATGAGATGCCAACTT
ACTCCTCGCTGCCGCCGTGGCTGGCCAATCCCCTCCGTGCATCGGCTCAG
GAACGACGCAAATTCGCCGATTTAGGAATCGACTCTAGCCTCCTCCGAGT
TCTGGAAGACAACGGCTATCGTGAAGCATTTGCCGTGCAGTCAACCGTCA
TTCCTCTCCTCCTGCAAGGACCTACGAACCACCCAGGAGACCTTTGCATC
TCCGCCGCTACTGGTTCAGGAAAAACTTTGTCCTACGTTCTACCATTGGT
CACGGCCTTGAAGCCGCTCCCTGCGCCTCGGTTACGAGGACTCATCGTGG
TACCTACTCGAGAGCTGGTGAAGCAGGCCAGAGAAGCTTGTGAACTCTGT
GCCGCTGGATCCGGCCTCCGCGTCGCGTCGGCAGTTGGAAACGTTGCGAT
CAAAGACGAGCAGCGGTCGTTGATGCGCGTTGATCAGGTCTATGGCCCTG
CGACATTCAAGCTTCGCCAGAACGTGCAACTGACAGGTGATGATTGGACG
AACTTCAATTTGCAGGACTACATCTCAGACGCTGGTGATCTAAGCGAGTC
TCTGCCAGGCTACGTTCACCGGTCAGAGCCTAATGTCGACATCTTAATCT
GTACTCCCGGTCGTCTGGTCGATCATCTTCGCTATACCAAAGGTTTCACT
CTTAAGAATCTCGAATGGCTTGTCATTGACGAGGCAGATCGACTACTAAA
TGAAAGTTTCCAGGAATGGGTGGACGTCGTGATGACCTCCCTGGACGCCC
GGAAAGCCCCTGATGCATTCGGGTTTAGTGGAAACTTTCTGTCCGGGCTT
GGCTTGCCGATCCAAAGCAAGGAACCAAGGAAAGTCGTTTTGAGTGCCAC
TATGACTAGAGATGTGACGAAGCTTAACTCTCTGCGTCTTGCGAACCCCA
AGCTAGTCGTCATCGGCTCCGATGCCGCTGCAACAGAAGATGAGAGCGGT
GGCGTTGCACCGTCAGACGAACAGTTTACGCTCCCGCCTACCCTAGAGGA
GCACACCGTATCGGTTGGAGATGGGTCGCAGAAGCCGCTTTATCTCCTGC
GCCTTCTGCTGTCCCACATCAAGCTTGAGACTAAGAGTATCAAGCCTTCT
GTGCACGACGCTTCTGAATCTGATGATTCTGATTCCGACGAATCAAGCTC
TGAATCGGATTCCGATGACGCGTCGGACGTGTCTAGCTCTGAAGATTCCG
ATTCCGACTCAGACTCGGATTCTGACTCTGATACAAGTTCTGACTCGTCC
ACAGACTCTGAGGATACCTCGGAGGACGAGTCGAGCGATGATTCAGAGTC
GTCGGACAGCGATTCTGAATCAGAGGACGAAAAGTCGGACCGACAAGGGC
CTTCGCAGACCACAGTTCTGGTCTTCACGAAGTCATCTGAATCCGCATCA
CGACTGGCTCGCCTGTTGGCACTCCTCGAACCCTCCCTCTCTGACCGCAT
TGGCACGATCATTAAATCCAACAAATCGTCCGCTTCGCGCAAGACCCTCA
CAGCTTACCGCCGGGGCAAGATCTCCGTGATTATTGCAACGGACCGGGCC
TCGCGTGGTCTAGACCTACGGTCACTGACCCATGTTGTCAACTACGATGT
GCCAGCTAGCATTACTACCTACGTGCACCGAGTTGGTCGTACAGCTCGAG
CTGGTCAGAAAGGATCGGCATGGACGCTTGTGGCACACCGAGAGGGCAAG
TGGTTCGCAAGCCAGATCGCCAAGGGCTCGGATGGAAAGATCACTCGGTC
CACCAAGGTTGGAAAGGTGCAATTCAAATTGGACAATATGAAGGAGGTCA
AGGCACGCTATGCATCTGCATTGGACCTGCTGGAGAAGGAAGTGAAGACG
GGTGGGACTAAGGCCTCCAAGCCCAGCGCACAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DBP6KJC3_010733Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010733-T1.utr5p1KJC3_010733-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010733-T1.exon1KJC3_010733-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010733-T1.cdsKJC3_010733-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010733-T1.utr3p1KJC3_010733-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010733-T1KJC3_010733-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09261EM7
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR014014
DBxrefInterPro:IPR000629
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR001650
DBxrefInterPro:IPR014001
DBxrefPFAM:PF04851
DBxrefPFAM:PF00271
DBxrefPFAM:PF00270
ProductATP-dependent RNA helicase dbp6
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:4203820..4206611 +
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