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KJC3_010735-T1, KJC3_010735-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010735-T1
Unique NameKJC3_010735-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:4209214..4210712-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010735-T1 ID=KJC3_010735-T1|Name=KJC3_010735-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1499bp|location=Sequence derived from alignment at ch7:4209214..4210712- (Aspergillus niger KJC3)
ATGTCTTCCACTTCCGATCGACAGTATGACGAAACGATAACTCGCCTAGT
TGAGTATGTTTATCACTACGAAGTGACCAGCGACCTCGCTATCCTACGGG
CCCGCTATGCCCTCATGGATGCTCTTGGTTGCGCGCTGGAGACTCTTCAG
CAAAGCCCCGAGTGTCGCGCTCTGATCGGCCCATACACACCAGGTCTGGT
CGCCCCTTATGGGTTCAAGCTGCCGGGCACCTGCCACCAACTTGATCCAG
TCAAGGGTGCCTTTGATATGGCAACCTTGATTCGCTTCCTGGACCACAAC
GATGCATACCCTGGTGCTGAATGGGGCCACCCGTCTGGTATGCCCGTCTG
CGGGATCTACGCTCCCAGAAGCTTGGTTGAATATAGGGCTAACCGATCGA
CAAAACAGATAACCTGGGCGCCATCTTGGCGGTCACAGATTGGCTCAGCC
GTACAGGCGCCACCAGCCAGCCACTGACCGTCCGGACGGTCCTGATCGCG
ATGATCAAAGCCTACGAGATTCAAGGCTGCTACCAGATCCGCAATGCCTT
CAACAAGGTGGGCCTAGATCATACGCTACTCGTGAAGATCGCCTCCACAG
CTGTTGTAGCTTGGTTGATGGGTCTGACGGAGAAACAAGCCGCCGTCGCG
CTCTCCCATGCGTGGGCTGATGGCCACCCTCTGCGCATTTTCCGTCAAAG
TCCTAATGCGGGGCCACGCAAGGGCTGGGCCGCTGGAGATGCCGCCATGC
GTGCTGTACACTTGTGCTTACTAGCTCGCGCCGGCCAGCCAGGCATTCCC
AGCGCGCTAACTGAGCCGGAATGGGGGTTTCTCGCTGTCAGCTTTGGGGG
CAAAGAGCTGCAGCTGCCACGTCCTTTCAAGACCCGGGTGATGGAGGAAG
TTTTCTTCAAACTCATCACTGCAGAGGGCCACGGCATCTCCGCAGTTCAG
GCGGCCATGGCGCTGGCTGAGACCATGGCCAGCAGGGGGATCGATCCTGC
TACTGAAATCAGTCGCATCGATATCCGCACGCATGAAGCGGCTGTACGCA
TCATCGACAAGCAAGGCCCGCTCACCAATGCGGCCGACCGCGATCACTGC
ATGCGGTACATGGTCTCGGTGGTGTTGTTGAAGAACGCGATCATCGAAGC
AGAGGACTACCACGATTCGAGCGTGTGGGCCCATGATCCGCGTGTTGAGG
CCCTACGCCAGCGGATCCATATGGCCGAAGACCCGCAGTTCACCTACGGC
TACCACCACAAAAAGGCGGCCGCCAGCGGACTCACCGTCTTTCTGACCAA
CGGGGAGCAGTTAGACGAAGTAGTCGTCGAATACCCAATCGGGCATCCGA
TGCACGAAGATACTTTGCCTAAGGTGCGCGCCAAGTTTGAGCGAAACATG
CAGGGCCTGTTCACGGCCGAGGAGACAAGCCGGGTGATCGACGCGATCCA
TCAGGACAAACTTCCGGTGCATCGATTGGTCGACCTGCTGGGCCGATGA
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Coding sequence (CDS) from alignment at ch7:4209214..4210712-

>KJC3_010735-T1 ID=KJC3_010735-T1|Name=KJC3_010735-T1|organism=Aspergillus niger KJC3|type=CDS|length=2856bp|location=Sequence derived from alignment at ch7:4209214..4210712- (Aspergillus niger KJC3)
ATAACCTGGGCGCCATCTTGGCGGTCACAGATTGGCTCAGCCGTACAGGC
GCCACCAGCCAGCCACTGACCGTCCGGACGGTCCTGATCGCGATGATCAA
AGCCTACGAGATTCAAGGCTGCTACCAGATCCGCAATGCCTTCAACAAGG
TGGGCCTAGATCATACGCTACTCGTGAAGATCGCCTCCACAGCTGTTGTA
GCTTGGTTGATGGGTCTGACGGAGAAACAAGCCGCCGTCGCGCTCTCCCA
TGCGTGGGCTGATGGCCACCCTCTGCGCATTTTCCGTCAAAGTCCTAATG
CGGGGCCACGCAAGGGCTGGGCCGCTGGAGATGCCGCCATGCGTGCTGTA
CACTTGTGCTTACTAGCTCGCGCCGGCCAGCCAGGCATTCCCAGCGCGCT
AACTGAGCCGGAATGGGGGTTTCTCGCTGTCAGCTTTGGGGGCAAAGAGC
TGCAGCTGCCACGTCCTTTCAAGACCCGGGTGATGGAGGAAGTTTTCTTC
AAACTCATCACTGCAGAGGGCCACGGCATCTCCGCAGTTCAGGCGGCCAT
GGCGCTGGCTGAGACCATGGCCAGCAGGGGGATCGATCCTGCTACTGAAA
TCAGTCGCATCGATATCCGCACGCATGAAGCGGCTGTACGCATCATCGAC
AAGCAAGGCCCGCTCACCAATGCGGCCGACCGCGATCACTGCATGCGGTA
CATGGTCTCGGTGGTGTTGTTGAAGAACGCGATCATCGAAGCAGAGGACT
ACCACGATTCGAGCGTGTGGGCCCATGATCCGCGTGTTGAGGCCCTACGC
CAGCGGATCCATATGGCCGAAGACCCGCAGTTCACCTACGGCTACCACCA
CAAAAAGGCGGCCGCCAGCGGACTCACCGTCTTTCTGACCAACGGGGAGC
AGTTAGACGAAGTAGTCGTCGAATACCCAATCGGGCATCCGATGCACGAA
GATACTTTGCCTAAGGTGCGCGCCAAGTTTGAGCGAAACATGCAGGGCCT
GTTCACGGCCGAGGAGACAAGCCGGGTGATCGACGCGATCCATCAGGACA
AACTTCCGGTGCATCGATTGGTCGACCTGCTGGGCCGATGAATGTCTTCC
ACTTCCGATCGACAGTATGACGAAACGATAACTCGCCTAGTTGAGTATGT
TTATCACTACGAAGTGACCAGCGACCTCGCTATCCTACGGGCCCGCTATG
CCCTCATGGATGCTCTTGGTTGCGCGCTGGAGACTCTTCAGCAAAGCCCC
GAGTGTCGCGCTCTGATCGGCCCATACACACCAGGTCTGGTCGCCCCTTA
TGGGTTCAAGCTGCCGGGCACCTGCCACCAACTTGATCCAGTCAAGGGTG
CCTTTGATATGGCAACCTTGATTCGCTTCCTGGACCACAACGATGCATAC
CCTGGTGCTGAATGGGGCCACCCGTCTGATAACCTGGGCGCCATCTTGGC
GGTCACAGATTGGCTCAGCCGTACAGGCGCCACCAGCCAGCCACTGACCG
TCCGGACGGTCCTGATCGCGATGATCAAAGCCTACGAGATTCAAGGCTGC
TACCAGATCCGCAATGCCTTCAACAAGGTGGGCCTAGATCATACGCTACT
CGTGAAGATCGCCTCCACAGCTGTTGTAGCTTGGTTGATGGGTCTGACGG
AGAAACAAGCCGCCGTCGCGCTCTCCCATGCGTGGGCTGATGGCCACCCT
CTGCGCATTTTCCGTCAAAGTCCTAATGCGGGGCCACGCAAGGGCTGGGC
CGCTGGAGATGCCGCCATGCGTGCTGTACACTTGTGCTTACTAGCTCGCG
CCGGCCAGCCAGGCATTCCCAGCGCGCTAACTGAGCCGGAATGGGGGTTT
CTCGCTGTCAGCTTTGGGGGCAAAGAGCTGCAGCTGCCACGTCCTTTCAA
GACCCGGGTGATGGAGGAAGTTTTCTTCAAACTCATCACTGCAGAGGGCC
ACGGCATCTCCGCAGTTCAGGCGGCCATGGCGCTGGCTGAGACCATGGCC
AGCAGGGGGATCGATCCTGCTACTGAAATCAGTCGCATCGATATCCGCAC
GCATGAAGCGGCTGTACGCATCATCGACAAGCAAGGCCCGCTCACCAATG
CGGCCGACCGCGATCACTGCATGCGGTACATGGTCTCGGTGGTGTTGTTG
AAGAACGCGATCATCGAAGCAGAGGACTACCACGATTCGAGCGTGTGGGC
CCATGATCCGCGTGTTGAGGCCCTACGCCAGCGGATCCATATGGCCGAAG
ACCCGCAGTTCACCTACGGCTACCACCACAAAAAGGCGGCCGCCAGCGGA
CTCACCGTCTTTCTGACCAACGGGGAGCAGTTAGACGAAGTAGTCGTCGA
ATACCCAATCGGGCATCCGATGCACGAAGATACTTTGCCTAAGGTGCGCG
CCAAGTTTGAGCGAAACATGCAGGGCCTGTTCACGGCCGAGGAGACAAGC
CGGGTGATCGACGCGATCCATCAGGACAAACTTCCGGTGCATCGATTGGT
CGACCTGCTGGGCCGATGAATGTCTTCCACTTCCGATCGACAGTATGACG
AAACGATAACTCGCCTAGTTGAGTATGTTTATCACTACGAAGTGACCAGC
GACCTCGCTATCCTACGGGCCCGCTATGCCCTCATGGATGCTCTTGGTTG
CGCGCTGGAGACTCTTCAGCAAAGCCCCGAGTGTCGCGCTCTGATCGGCC
CATACACACCAGGTCTGGTCGCCCCTTATGGGTTCAAGCTGCCGGGCACC
TGCCACCAACTTGATCCAGTCAAGGGTGCCTTTGATATGGCAACCTTGAT
TCGCTTCCTGGACCACAACGATGCATACCCTGGTGCTGAATGGGGCCACC
CGTCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016829lyase activity
GO:00515372 iron, 2 sulfur cluster binding
GO:00475472-methylcitrate dehydratase activity
Vocabulary: Biological Process
TermDefinition
GO:0019629propionate catabolic process, 2-methylcitrate cycle
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010735KJC3_010735Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010735-T1KJC3_010735-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010735-T1.cdsKJC3_010735-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010735-T1.exon2KJC3_010735-T1.exon2Aspergillus niger KJC3exon
KJC3_010735-T1.exon1KJC3_010735-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR036148
DBxrefInterPro:IPR042188
DBxrefInterPro:IPR005656
DBxrefInterPro:IPR042183
DBxrefInterPro:IPR012705
DBxrefPFAM:PF03972
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:4209214..4210712 -
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