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KJC3_010749-T1, KJC3_010749-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010749-T1
Unique NameKJC3_010749-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:4242901..4244120-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010749-T1 ID=KJC3_010749-T1|Name=KJC3_010749-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1220bp|location=Sequence derived from alignment at ch7:4242901..4244120- (Aspergillus niger KJC3)
CAGAAAGGCCAGCACTGCTTCACTACAACAGCCCACCTGCTCAACTTCCG
CTTCAGACACTTTACCGTGTCTCAATTTTATACATATTTTTCTACAGTGT
TATTATTACCTATACTGAATCTTAATTATGTCACGACACGCCCAAGTGGA
GGAGGTGTATGACTCCGACCCGGAGGAAGTTGCTCCCTCCGATTCCTCGC
CCGCCAACTTTGCCAATGAGTCCCTCCTTTCTGGAGCCGGAGTACCTATG
TCTGGCTCAGTACCCATGAGACCCGCTCCCGAACCTCAGCGCGAAATCCC
CAAGCATTACCAGTGCCTGTATCCGATATACTTCGACAAGTCGCGGACCC
GCGCGGAGGGCCGCAAGGTCGGAAGTGAGCTGGCGGTTGAGAACCCGCTG
GCGAGGGACATTGTCGATGCGGTGCAGATGTTGGGACTGAATGTCGGGTT
CGAGCCTGAGAAGCTGCACCCGAAGGACTGGGCCAACCCTGGACGTGTGC
GCGTTTTGCTGAAGGACGAGGATGGCAAATTGGTTAACTCGAGGATCAAG
AACAGTTAGTGTACCCCAACTTGTCCGCAAGTTACTATCAAATCCGACGC
CTTTTGATATGGCCTGATCACAGTTCCCTTTGTCTGACCATAACTACAGA
GCACCACCTTTACATCCTCGTGGCGCAATACCTCAAGGCTCACCCTACCA
CCGAAGAATCCCCCTACCGTCTTAGAATTCGAGGACTCCCTATGCCCGAG
AAACTGCCTGCTGCGCCTGCCGCTCCCCGCGGATGGAAGATCGGAAAGAT
CCTGCCGATACACTCTCCGGCCTACAGCGGTGGTGGAGTCAGCGATAACC
CGCTCAAGGACGCCATGGCTGAAATGCAGAACATGCAGGGTATGCCCGGA
ATGCCCCAGATACCTGGAATGCCGGATCTGGCAGGAATGATGGGAGGAAT
GGGAGGAATGGGTGGAAGTCCGTCTGCTGGAGGCAGCGAAAAGAAGAAGA
AGGATAAGAAGAAGGGCAAGGCGTGAAGCACTTGTCGATGTTTCTTCATG
TGGTACATAGGCTTTTGATTGCATTGGCACGGGTGAAAGGCGTTATGATG
ATTCATGTATAGAGGGCATCTCTGCTGTTCTCTTGATACCAAGTCGAATG
AAATGATCAATGAGTGGAGACATACTATCTGGATCATGGTATTGGATGTG
GCTGATAGGGGCCATTTGCC
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Coding sequence (CDS) from alignment at ch7:4242901..4244120-

>KJC3_010749-T1 ID=KJC3_010749-T1|Name=KJC3_010749-T1|organism=Aspergillus niger KJC3|type=CDS|length=1608bp|location=Sequence derived from alignment at ch7:4242901..4244120- (Aspergillus niger KJC3)
AGCACCACCTTTACATCCTCGTGGCGCAATACCTCAAGGCTCACCCTACC
ACCGAAGAATCCCCCTACCGTCTTAGAATTCGAGGACTCCCTATGCCCGA
GAAACTGCCTGCTGCGCCTGCCGCTCCCCGCGGATGGAAGATCGGAAAGA
TCCTGCCGATACACTCTCCGGCCTACAGCGGTGGTGGAGTCAGCGATAAC
CCGCTCAAGGACGCCATGGCTGAAATGCAGAACATGCAGGGTATGCCCGG
AATGCCCCAGATACCTGGAATGCCGGATCTGGCAGGAATGATGGGAGGAA
TGGGAGGAATGGGTGGAAGTCCGTCTGCTGGAGGCAGCGAAAAGAAGAAG
AAGGATAAGAAGAAGGGCAAGGCGTGAATGTCACGACACGCCCAAGTGGA
GGAGGTGTATGACTCCGACCCGGAGGAAGTTGCTCCCTCCGATTCCTCGC
CCGCCAACTTTGCCAATGAGTCCCTCCTTTCTGGAGCCGGAGTACCTATG
TCTGGCTCAGTACCCATGAGACCCGCTCCCGAACCTCAGCGCGAAATCCC
CAAGCATTACCAGTGCCTGTATCCGATATACTTCGACAAGTCGCGGACCC
GCGCGGAGGGCCGCAAGGTCGGAAGTGAGCTGGCGGTTGAGAACCCGCTG
GCGAGGGACATTGTCGATGCGGTGCAGATGTTGGGACTGAATGTCGGGTT
CGAGCCTGAGAAGCTGCACCCGAAGGACTGGGCCAACCCTGGACGTGTGC
GCGTTTTGCTGAAGGACGAGGATGGCAAATTGGTTAACTCGAGGATCAAG
AACAAGCACCACCTTTACATCCTCGTGGCGCAATACCTCAAGGCTCACCC
TACCACCGAAGAATCCCCCTACCGTCTTAGAATTCGAGGACTCCCTATGC
CCGAGAAACTGCCTGCTGCGCCTGCCGCTCCCCGCGGATGGAAGATCGGA
AAGATCCTGCCGATACACTCTCCGGCCTACAGCGGTGGTGGAGTCAGCGA
TAACCCGCTCAAGGACGCCATGGCTGAAATGCAGAACATGCAGGGTATGC
CCGGAATGCCCCAGATACCTGGAATGCCGGATCTGGCAGGAATGATGGGA
GGAATGGGAGGAATGGGTGGAAGTCCGTCTGCTGGAGGCAGCGAAAAGAA
GAAGAAGGATAAGAAGAAGGGCAAGGCGTGAATGTCACGACACGCCCAAG
TGGAGGAGGTGTATGACTCCGACCCGGAGGAAGTTGCTCCCTCCGATTCC
TCGCCCGCCAACTTTGCCAATGAGTCCCTCCTTTCTGGAGCCGGAGTACC
TATGTCTGGCTCAGTACCCATGAGACCCGCTCCCGAACCTCAGCGCGAAA
TCCCCAAGCATTACCAGTGCCTGTATCCGATATACTTCGACAAGTCGCGG
ACCCGCGCGGAGGGCCGCAAGGTCGGAAGTGAGCTGGCGGTTGAGAACCC
GCTGGCGAGGGACATTGTCGATGCGGTGCAGATGTTGGGACTGAATGTCG
GGTTCGAGCCTGAGAAGCTGCACCCGAAGGACTGGGCCAACCCTGGACGT
GTGCGCGTTTTGCTGAAGGACGAGGATGGCAAATTGGTTAACTCGAGGAT
CAAGAACA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0048500signal recognition particle
Vocabulary: Biological Process
TermDefinition
GO:0006614SRP-dependent cotranslational protein targeting to membrane
Vocabulary: Molecular Function
TermDefinition
GO:00083127S RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010749KJC3_010749Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010749-T1KJC3_010749-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010749-T1.cdsKJC3_010749-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010749-T1.utr3p1KJC3_010749-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010749-T1.exon2KJC3_010749-T1.exon2Aspergillus niger KJC3exon
KJC3_010749-T1.exon1KJC3_010749-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010749-T1.utr5p1KJC3_010749-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092647CM
DBxrefInterPro:IPR022938
DBxrefInterPro:IPR002778
DBxrefInterPro:IPR036521
DBxrefPFAM:PF01922
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:4242901..4244120 -
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