KJC3_010762-T1, KJC3_010762-T1 (mRNA) Aspergillus niger KJC3

Overview


Name	KJC3_010762-T1
Unique Name	KJC3_010762-T1
Type	mRNA
Organism	Aspergillus niger KJC3

Sequences

The following sequences are available for this feature:

mRNA from alignment at ch7:4282557..4284970+
coding sequence from alignment at ch7:4282557..4284970+

mRNA from alignment at ch7:4282557..4284970+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>KJC3_010762-T1 ID=KJC3_010762-T1|Name=KJC3_010762-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2414bp|location=Sequence derived from alignment at ch7:4282557..4284970+ (Aspergillus niger KJC3)
CCATGACTTCAGGTGCTGCAACTACTACAATTCAACCTCACTGCCACCGT
TATTATGGAAGGTGCCGATATTGTTGAGTCGCCGCGCAAGCGGCTCAAGA
CCGATAACAACTCCGTTACCGATGATGCTGCGCTTCCTTCCTCCAACGAG
GCAATTGCGCAATCGGACGCCGCTAAACTCTCCGCGGAGGAGGCGAGAGA
ACTCGAGGTCGGAATCACCGAGTTTGTCAGCGGCGATAATGAAGGGTTCT
ACGGTATCCTAAAGAAAAGGTATAACTACTCTCTGAATACTGTAATCATG
CAGGCGCTTACCGACCTCTTCTACTAGATATACCGACTTCCTTGTCAACG
AGATCGTACCGTCCGGCGAAGTCCTGCATCTTCACAACATCCCCACCCCG
GAAGCAGAACAGGAGAAGGCTAAGCCCGCGGATACTCCCACGCCCAAACC
CGCAGAAAATGATCAGCAGGAAAAGCCAGAAGGCTCCGCAGAGAAGGATG
CTGCGCCAAGTGCAGAGAGCACGCCGGACTTCCAGATCCCAGAGGAAGAC
ATGACGCTCCTTGAATCCCTGTTTGGCGAAGAATCTACCAAGAAGATTGT
ATCGCTGAACAAACGTGCCCTTCTCAATCCCAAATCGAAACCGAGCGACC
TACCTAAGATTCCCACTCTTCTTGTCGATGACCGCGACCTGCGCATCAAG
ATGCACCAGGCCATCCGTCGCATCTTCAAATCGCAACTCGAGTCTCAAAC
CGACAGCGAAGGGATGATGGTTATTTCTGCTGCGCCAAACCGGAACAACC
GTAGTGCGCAGGGCGGGCGTAACAATGCGCGCCCCCGTGTGCCGGTCAAC
TGGGATGAGCTGGGTGGTCCCTATCTGCACTTCACTCTGTACAAGGAGAA
TAAGGATACTATGGAAGTTCTCTCGTTCATCTCGCGGCAGTTGAAGATTA
ACACGAAGAACTTCCAATTCGCTGGAACCAAGGACCGCCGCGGTGTTACT
GTTCAGAGGGCCTGTGCGCACCGTTTACATGCTGAGCGCCTCACAAAGAT
CAACCCTACGCTTCGCAACGCTGCTCTCGGCGATTTCGAGTATTGCAAAC
ATGGCCTTGACCTGGGAGATCTGAATGGCAACGAATTCGTTATCAGTCTC
CGTGAGTGCGATATTCCAGGTGTCGACTTCAGCAACCGTGAAACTGCTGT
TGCAAAGGCAAAGGAGGTCGTGGGCACAGCACTACGGAATCTCCGCGAGC
GCGGTTACTTCAACTACTTCGGTCTGCAACGTTTTGGAACCTTTGCTACC
CGTACAGACACGGTCGGTGTCAAGATGCTCCAGGGCGACTTCAAGGGCGC
CTGCGATGCCATCCTCCAGTACAGCCCTCATGCTCTAGCTGCTGCTCAGG
AGGGCGAGAACTCGACGGCCTTGGTCAGCTCCGATGACAAGGCCCGCGCA
GAAGCTATCCACATTTTTGAAACGACCGGAAACGCCAACAAGGCTCTTGA
GAAGCTGCCTCGAAAATTCGCGGCAGAATCCACCGTCATGCGTCAACTCA
GCCGTGCCCAGAACGACTACCTTGGTGCGCTCCAAGCTATCCCTCGTAAC
CTGCGGTTGATGTATGTCCACGCGTACCAGTCCTTGGTCTGGAACTTTGC
CGCCGGTGAGCGCTGGCGCCTGTACGGCGACAAGGTCGTGGAGGGTGATC
TCGTGCTGGTGCACGAGCACAGCGACAAGGATGACACGGCAGCTGCCGCC
GCCGCGGGCGAGGTTGACGCCGATGGCGAAGTCATCATCACCCCGCAGGC
GGGAGACAGCGCTTACGTCTCTGAAGGCATAACCCGTGCGCGCGCCTTGA
CTGCCGAGGAGGCAGCTAGCGGCAAGTACAGCATCTTCGATGTCGTTCTG
ACCCAGCCCGGCTACGATGTCCTTTACCCGCCCAACAAGATGACGGACTT
CTACAAACAATTCATGGGCAGTGCTCAGGGTGGCGGTCTCGACCCCTTCG
ACATGCGTCGCAAGTGGAGGGAGGTTAGTCTCACTGGTAGCTATCGCAAG
CTGCTCAACCGCCCGGGACCCGACTTCTCCTTCGACGTGCATGTGTATAC
TCAGGACGATGAGCAGTTTGTGCAGACTGACTTGGAAAAGCTCCAAGGCA
AGAAGGCTGAGACTGAGACTTCCGGTGAAGCGACGCCTTCCTCCAACGCT
CAGGAGAAGCTCGCCATTGTGCTCAAGTTCCAGCTCGGTTCGAGTCAGTA
TGCCACCATGGCTCTGAGGGAGTTGTCCAAGGGTAAGGTCAAGGCCTACC
AGCCCGATTTCGGCAAGGGTCGGTAGACGATGGGTGTATATATAGTACAA
GCTACATTTTTGTATATACTGGGTATAGATTGACTTGCAACATGATTGAA
CGCTACGTGATAAA

Coding sequence (CDS) from alignment at ch7:4282557..4284970+

>KJC3_010762-T1 ID=KJC3_010762-T1|Name=KJC3_010762-T1|organism=Aspergillus niger KJC3|type=CDS|length=4428bp|location=Sequence derived from alignment at ch7:4282557..4284970+ (Aspergillus niger KJC3)
ATGGAAGGTGCCGATATTGTTGAGTCGCCGCGCAAGCGGCTCAAGACCGA
TAACAACTCCGTTACCGATGATGCTGCGCTTCCTTCCTCCAACGAGGCAA
TTGCGCAATCGGACGCCGCTAAACTCTCCGCGGAGGAGGCGAGAGAACTC
GAGGTCGGAATCACCGAGTTTGTCAGCGGCGATAATGAAGGGTTCTACGG
TATCCTAAAGAAAAGATATACCGACTTCCTTGTCAACGAGATCGTACCGT
CCGGCGAAGTCCTGCATCTTCACAACATCCCCACCCCGGAAGCAGAACAG
GAGAAGGCTAAGCCCGCGGATACTCCCACGCCCAAACCCGCAGAAAATGA
TCAGCAGGAAAAGCCAGAAGGCTCCGCAGAGAAGGATGCTGCGCCAAGTG
CAGAGAGCACGCCGGACTTCCAGATCCCAGAGGAAGACATGACGCTCCTT
GAATCCCTGTTTGGCGAAGAATCTACCAAGAAGATTGTATCGCTGAACAA
ACGTGCCCTTCTCAATCCCAAATCGAAACCGAGCGACCTACCTAAGATTC
CCACTCTTCTTGTCGATGACCGCGACCTGCGCATCAAGATGCACCAGGCC
ATCCGTCGCATCTTCAAATCGCAACTCGAGTCTCAAACCGACAGCGAAGG
GATGATGGTTATTTCTGCTGCGCCAAACCGGAACAACCGTAGTGCGCAGG
GCGGGCGTAACAATGCGCGCCCCCGTGTGCCGGTCAACTGGGATGAGCTG
GGTGGTCCCTATCTGCACTTCACTCTGTACAAGGAGAATAAGGATACTAT
GGAAGTTCTCTCGTTCATCTCGCGGCAGTTGAAGATTAACACGAAGAACT
TCCAATTCGCTGGAACCAAGGACCGCCGCGGTGTTACTGTTCAGAGGGCC
TGTGCGCACCGTTTACATGCTGAGCGCCTCACAAAGATCAACCCTACGCT
TCGCAACGCTGCTCTCGGCGATTTCGAGTATTGCAAACATGGCCTTGACC
TGGGAGATCTGAATGGCAACGAATTCGTTATCAGTCTCCGTGAGTGCGAT
ATTCCAGGTGTCGACTTCAGCAACCGTGAAACTGCTGTTGCAAAGGCAAA
GGAGGTCGTGGGCACAGCACTACGGAATCTCCGCGAGCGCGGTTACTTCA
ACTACTTCGGTCTGCAACGTTTTGGAACCTTTGCTACCCGTACAGACACG
GTCGGTGTCAAGATGCTCCAGGGCGACTTCAAGGGCGCCTGCGATGCCAT
CCTCCAGTACAGCCCTCATGCTCTAGCTGCTGCTCAGGAGGGCGAGAACT
CGACGGCCTTGGTCAGCTCCGATGACAAGGCCCGCGCAGAAGCTATCCAC
ATTTTTGAAACGACCGGAAACGCCAACAAGGCTCTTGAGAAGCTGCCTCG
AAAATTCGCGGCAGAATCCACCGTCATGCGTCAACTCAGCCGTGCCCAGA
ACGACTACCTTGGTGCGCTCCAAGCTATCCCTCGTAACCTGCGGTTGATG
TATGTCCACGCGTACCAGTCCTTGGTCTGGAACTTTGCCGCCGGTGAGCG
CTGGCGCCTGTACGGCGACAAGGTCGTGGAGGGTGATCTCGTGCTGGTGC
ACGAGCACAGCGACAAGGATGACACGGCAGCTGCCGCCGCCGCGGGCGAG
GTTGACGCCGATGGCGAAGTCATCATCACCCCGCAGGCGGGAGACAGCGC
TTACGTCTCTGAAGGCATAACCCGTGCGCGCGCCTTGACTGCCGAGGAGG
CAGCTAGCGGCAAGTACAGCATCTTCGATGTCGTTCTGACCCAGCCCGGC
TACGATGTCCTTTACCCGCCCAACAAGATGACGGACTTCTACAAACAATT
CATGGGCAGTGCTCAGGGTGGCGGTCTCGACCCCTTCGACATGCGTCGCA
AGTGGAGGGAGGTTAGTCTCACTGGTAGCTATCGCAAGCTGCTCAACCGC
CCGGGACCCGACTTCTCCTTCGACGTGCATGTGTATACTCAGGACGATGA
GCAGTTTGTGCAGACTGACTTGGAAAAGCTCCAAGGCAAGAAGGCTGAGA
CTGAGACTTCCGGTGAAGCGACGCCTTCCTCCAACGCTCAGGAGAAGCTC
GCCATTGTGCTCAAGTTCCAGCTCGGTTCGAGTCAGTATGCCACCATGGC
TCTGAGGGAGTTGTCCAAGGGTAAGGTCAAGGCCTACCAGCCCGATTTCG
GCAAGGGTCGGTAGATGGAAGGTGCCGATATTGTTGAGTCGCCGCGCAAG
CGGCTCAAGACCGATAACAACTCCGTTACCGATGATGCTGCGCTTCCTTC
CTCCAACGAGGCAATTGCGCAATCGGACGCCGCTAAACTCTCCGCGGAGG
AGGCGAGAGAACTCGAGGTCGGAATCACCGAGTTTGTCAGCGGCGATAAT
GAAGGGTTCTACGGTATCCTAAAGAAAAGATATACCGACTTCCTTGTCAA
CGAGATCGTACCGTCCGGCGAAGTCCTGCATCTTCACAACATCCCCACCC
CGGAAGCAGAACAGGAGAAGGCTAAGCCCGCGGATACTCCCACGCCCAAA
CCCGCAGAAAATGATCAGCAGGAAAAGCCAGAAGGCTCCGCAGAGAAGGA
TGCTGCGCCAAGTGCAGAGAGCACGCCGGACTTCCAGATCCCAGAGGAAG
ACATGACGCTCCTTGAATCCCTGTTTGGCGAAGAATCTACCAAGAAGATT
GTATCGCTGAACAAACGTGCCCTTCTCAATCCCAAATCGAAACCGAGCGA
CCTACCTAAGATTCCCACTCTTCTTGTCGATGACCGCGACCTGCGCATCA
AGATGCACCAGGCCATCCGTCGCATCTTCAAATCGCAACTCGAGTCTCAA
ACCGACAGCGAAGGGATGATGGTTATTTCTGCTGCGCCAAACCGGAACAA
CCGTAGTGCGCAGGGCGGGCGTAACAATGCGCGCCCCCGTGTGCCGGTCA
ACTGGGATGAGCTGGGTGGTCCCTATCTGCACTTCACTCTGTACAAGGAG
AATAAGGATACTATGGAAGTTCTCTCGTTCATCTCGCGGCAGTTGAAGAT
TAACACGAAGAACTTCCAATTCGCTGGAACCAAGGACCGCCGCGGTGTTA
CTGTTCAGAGGGCCTGTGCGCACCGTTTACATGCTGAGCGCCTCACAAAG
ATCAACCCTACGCTTCGCAACGCTGCTCTCGGCGATTTCGAGTATTGCAA
ACATGGCCTTGACCTGGGAGATCTGAATGGCAACGAATTCGTTATCAGTC
TCCGTGAGTGCGATATTCCAGGTGTCGACTTCAGCAACCGTGAAACTGCT
GTTGCAAAGGCAAAGGAGGTCGTGGGCACAGCACTACGGAATCTCCGCGA
GCGCGGTTACTTCAACTACTTCGGTCTGCAACGTTTTGGAACCTTTGCTA
CCCGTACAGACACGGTCGGTGTCAAGATGCTCCAGGGCGACTTCAAGGGC
GCCTGCGATGCCATCCTCCAGTACAGCCCTCATGCTCTAGCTGCTGCTCA
GGAGGGCGAGAACTCGACGGCCTTGGTCAGCTCCGATGACAAGGCCCGCG
CAGAAGCTATCCACATTTTTGAAACGACCGGAAACGCCAACAAGGCTCTT
GAGAAGCTGCCTCGAAAATTCGCGGCAGAATCCACCGTCATGCGTCAACT
CAGCCGTGCCCAGAACGACTACCTTGGTGCGCTCCAAGCTATCCCTCGTA
ACCTGCGGTTGATGTATGTCCACGCGTACCAGTCCTTGGTCTGGAACTTT
GCCGCCGGTGAGCGCTGGCGCCTGTACGGCGACAAGGTCGTGGAGGGTGA
TCTCGTGCTGGTGCACGAGCACAGCGACAAGGATGACACGGCAGCTGCCG
CCGCCGCGGGCGAGGTTGACGCCGATGGCGAAGTCATCATCACCCCGCAG
GCGGGAGACAGCGCTTACGTCTCTGAAGGCATAACCCGTGCGCGCGCCTT
GACTGCCGAGGAGGCAGCTAGCGGCAAGTACAGCATCTTCGATGTCGTTC
TGACCCAGCCCGGCTACGATGTCCTTTACCCGCCCAACAAGATGACGGAC
TTCTACAAACAATTCATGGGCAGTGCTCAGGGTGGCGGTCTCGACCCCTT
CGACATGCGTCGCAAGTGGAGGGAGGTTAGTCTCACTGGTAGCTATCGCA
AGCTGCTCAACCGCCCGGGACCCGACTTCTCCTTCGACGTGCATGTGTAT
ACTCAGGACGATGAGCAGTTTGTGCAGACTGACTTGGAAAAGCTCCAAGG
CAAGAAGGCTGAGACTGAGACTTCCGGTGAAGCGACGCCTTCCTCCAACG
CTCAGGAGAAGCTCGCCATTGTGCTCAAGTTCCAGCTCGGTTCGAGTCAG
TATGCCACCATGGCTCTGAGGGAGTTGTCCAAGGGTAAGGTCAAGGCCTA
CCAGCCCGATTTCGGCAAGGGTCGGTAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0009982	pseudouridine synthase activity
GO:0003723	RNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0001522	pseudouridine synthesis
GO:0009451	RNA modification

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
KJC3_010762	KJC3_010762	Aspergillus niger KJC3	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_010762-T1.utr5p1	KJC3_010762-T1.utr5p1	Aspergillus niger KJC3	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_010762-T1.exon1	KJC3_010762-T1.exon1	Aspergillus niger KJC3	exon
KJC3_010762-T1.exon2	KJC3_010762-T1.exon2	Aspergillus niger KJC3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_010762-T1.cds	KJC3_010762-T1.cds	Aspergillus niger KJC3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_010762-T1.utr3p1	KJC3_010762-T1.utr3p1	Aspergillus niger KJC3	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_010762-T1	KJC3_010762-T1-protein	Aspergillus niger KJC3	polypeptide

Properties


Property Name	Value
Note	BUSCO:EOG09261EY9
DBxref	InterPro:IPR020103
DBxref	InterPro:IPR011760
DBxref	InterPro:IPR042214
DBxref	InterPro:IPR001656
DBxref	PFAM:PF01142
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC3	2021-10-31

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ch7	supercontig	ch7:4282557..4284970 +

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KJC3_010762-T1, KJC3_010762-T1 (mRNA) Aspergillus niger KJC3