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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:4371522..4372909+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010787-T1 ID=KJC3_010787-T1|Name=KJC3_010787-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1388bp|location=Sequence derived from alignment at ch7:4371522..4372909+ (Aspergillus niger KJC3)
AAACAGCGGTCAATCTTTACCGAAATTCATTTACACCTACGCCGCAATGA
CCGCAAGGCGCCACAGGATTGACTTCTCCCTGCGAAGACGACGTAACGAC
TTGTCGAATACGTCGTCTGGCAGTATCTCTCCACCAGTACCTATTCTCCA
GTCGCCCGTCACGTTCCAAGCGTTCGCATCAGTCAGCGTCTCCGAGGCAA
CACTCAAGCAGAAGAACAAATTAGAAAGGGATCCCGTGAGGCCGTCTATG
TTCCTGGAAGAGAAGGACGACGATGAGGCCCCGAATTCTGCTCTGACTGG
CGGTGCACCACTGGATGTCAAGCCAGTTCATATAGAGCGTAAGAGTGTGG
AGGAGAAGCCGATGACTCGAACGAAAAGCCAGTACTTCGAAGACGCCTTC
AGCACTAGGGGCCCGTTGACCTCACCCAGAACTCAAATCAGCCAGGATTC
TGTCGTGGTGGTAGAGATCAAGACCAACACCAAGGTGCGTGAGGGTGGGC
TTCAGTCAAAATTTCCAGTAACGAGAGGACTTTTTTTGGGCTACCATTCT
CATGCAAGGCGTAGGTCAAAGAAGTGGAGTCACTCGTCTCGAACATTTCG
TCCCATATGGCACGCATCTTTCAGAAATCCGAAACCCTTATGATGACCAC
CATCCAAGAGGATGCATGCATCCAATTCGGCAGAGTAAACCTGCCAGCCT
ACCTGATGAAAGTCTTTGCACTGCCGTATCTCATCGCGCCAATAACCAAC
CTTCGTAGCACTATTCTGATCCAGGCAGCTCTTCAGGAAATTCTTCACGT
GGCTCCAAACCGAGGAGTCATCTTATATATTCCAATCCCAGAGGAAAATT
TCGCGACCAACGGGGTTACCATGATGGGTGAAATTGCACGACTGGAGCGC
TCTTCCCCGGATCACGGCTCCGGTTTATTCAAAACTGTCTCACGAACCAT
GAGTCGAAGACTGAAATCTACCAGTTCACAGAGCGCTCCTATTTCGGTTG
CAACCACCTCTTCGTGGGCCTGTGGGGGCACACAGGCGCCATCTCCCGAG
AAAGAATCACAAGCTAGTGATGCTACGGACGGCGATGTCAGGTCGAAGTC
AAGTACAAAATCCAGGGGCTTTCGTCACTTCCTTTCCCGTCAGGGAACAG
AACGGAATGAAAAGTCCGGGAATACGCAGTAGTAGCCTGCATTGACGTGT
CCATTACCCCAAACCGATCCGCTTATCCATTTTGTACTCACACTCTTTGT
CATTATCATCATTCACTTTTTCATCAAATGAGCCTGTTGTATTTCCTTAA
AAGGTCACTTATTGCCATCATGAGCAGAATGTGCGGGAGTTCCAGCAATG
GTCCATGGTATTCACGGTAGTTACCTTCTTTGAATTGG back to topCoding sequence (CDS) from alignment at ch7:4371522..4372909+ >KJC3_010787-T1 ID=KJC3_010787-T1|Name=KJC3_010787-T1|organism=Aspergillus niger KJC3|type=CDS|length=2112bp|location=Sequence derived from alignment at ch7:4371522..4372909+ (Aspergillus niger KJC3)
ATGACCGCAAGGCGCCACAGGATTGACTTCTCCCTGCGAAGACGACGTAA
CGACTTGTCGAATACGTCGTCTGGCAGTATCTCTCCACCAGTACCTATTC
TCCAGTCGCCCGTCACGTTCCAAGCGTTCGCATCAGTCAGCGTCTCCGAG
GCAACACTCAAGCAGAAGAACAAATTAGAAAGGGATCCCGTGAGGCCGTC
TATGTTCCTGGAAGAGAAGGACGACGATGAGGCCCCGAATTCTGCTCTGA
CTGGCGGTGCACCACTGGATGTCAAGCCAGTTCATATAGAGCGTAAGAGT
GTGGAGGAGAAGCCGATGACTCGAACGAAAAGCCAGTACTTCGAAGACGC
CTTCAGCACTAGGGGCCCGTTGACCTCACCCAGAACTCAAATCAGCCAGG
ATTCTGTCGTGGTGGTAGAGATCAAGACCAACACCAAGGTCAAAGAAGTG
GAGTCACTCGTCTCGAACATTTCGTCCCATATGGCACGCATCTTTCAGAA
ATCCGAAACCCTTATGATGACCACCATCCAAGAGGATGCATGCATCCAAT
TCGGCAGAGTAAACCTGCCAGCCTACCTGATGAAAGTCTTTGCACTGCCG
TATCTCATCGCGCCAATAACCAACCTTCGTAGCACTATTCTGATCCAGGC
AGCTCTTCAGGAAATTCTTCACGTGGCTCCAAACCGAGGAGTCATCTTAT
ATATTCCAATCCCAGAGGAAAATTTCGCGACCAACGGGGTTACCATGATG
GGTGAAATTGCACGACTGGAGCGCTCTTCCCCGGATCACGGCTCCGGTTT
ATTCAAAACTGTCTCACGAACCATGAGTCGAAGACTGAAATCTACCAGTT
CACAGAGCGCTCCTATTTCGGTTGCAACCACCTCTTCGTGGGCCTGTGGG
GGCACACAGGCGCCATCTCCCGAGAAAGAATCACAAGCTAGTGATGCTAC
GGACGGCGATGTCAGGTCGAAGTCAAGTACAAAATCCAGGGGCTTTCGTC
ACTTCCTTTCCCGTCAGGGAACAGAACGGAATGAAAAGTCCGGGAATACG
CAGTAGATGACCGCAAGGCGCCACAGGATTGACTTCTCCCTGCGAAGACG
ACGTAACGACTTGTCGAATACGTCGTCTGGCAGTATCTCTCCACCAGTAC
CTATTCTCCAGTCGCCCGTCACGTTCCAAGCGTTCGCATCAGTCAGCGTC
TCCGAGGCAACACTCAAGCAGAAGAACAAATTAGAAAGGGATCCCGTGAG
GCCGTCTATGTTCCTGGAAGAGAAGGACGACGATGAGGCCCCGAATTCTG
CTCTGACTGGCGGTGCACCACTGGATGTCAAGCCAGTTCATATAGAGCGT
AAGAGTGTGGAGGAGAAGCCGATGACTCGAACGAAAAGCCAGTACTTCGA
AGACGCCTTCAGCACTAGGGGCCCGTTGACCTCACCCAGAACTCAAATCA
GCCAGGATTCTGTCGTGGTGGTAGAGATCAAGACCAACACCAAGGTCAAA
GAAGTGGAGTCACTCGTCTCGAACATTTCGTCCCATATGGCACGCATCTT
TCAGAAATCCGAAACCCTTATGATGACCACCATCCAAGAGGATGCATGCA
TCCAATTCGGCAGAGTAAACCTGCCAGCCTACCTGATGAAAGTCTTTGCA
CTGCCGTATCTCATCGCGCCAATAACCAACCTTCGTAGCACTATTCTGAT
CCAGGCAGCTCTTCAGGAAATTCTTCACGTGGCTCCAAACCGAGGAGTCA
TCTTATATATTCCAATCCCAGAGGAAAATTTCGCGACCAACGGGGTTACC
ATGATGGGTGAAATTGCACGACTGGAGCGCTCTTCCCCGGATCACGGCTC
CGGTTTATTCAAAACTGTCTCACGAACCATGAGTCGAAGACTGAAATCTA
CCAGTTCACAGAGCGCTCCTATTTCGGTTGCAACCACCTCTTCGTGGGCC
TGTGGGGGCACACAGGCGCCATCTCCCGAGAAAGAATCACAAGCTAGTGA
TGCTACGGACGGCGATGTCAGGTCGAAGTCAAGTACAAAATCCAGGGGCT
TTCGTCACTTCCTTTCCCGTCAGGGAACAGAACGGAATGAAAAGTCCGGG
AATACGCAGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010787-T1.utr5p1 | KJC3_010787-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010787-T1.utr3p1 | KJC3_010787-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR014347 |
| DBxref | InterPro:IPR001398 |
| DBxref | PFAM:PF01187 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:4371522..4372909 + |
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