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KJC3_010790-T1, KJC3_010790-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010790-T1
Unique NameKJC3_010790-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:4374109..4377056-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010790-T1 ID=KJC3_010790-T1|Name=KJC3_010790-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2948bp|location=Sequence derived from alignment at ch7:4374109..4377056- (Aspergillus niger KJC3)
AGACTCCAGATACCCTCCGCTAATCGCGACACTCGATTGCTCCTCTCGGG
GACAAGAACTACCTAGTTCGTAAAGATTCGTGTCCCACGGTTCTTACCCC
CCTGGCTGGGGCACTTCATTCCCAAATCTCTACGCCCAAACGTGACAATG
GCGGTCCCGGAGACACAGCCCGCTCCGCAAGGAAGCGTTGCCGACCAGAA
TGCGCCTATAGCTGCTGCTGCTGAACCGAGAAAGAAGCTCCTTGGAAGAC
AGTTCTACGAAAGTATTGGAAGCCCGAAGTACATTATTGCACCTATGGTG
GACCGGTCTGAGTTTGTAGGTTCCCCTACGAATGTACTTTTTGGATCTCA
ACTAACCGGCCTGGAGGCGTGGCGCATGCTCACTAGGTCGTTCATGACAC
CGGAAGACCAGAAAAAGGTTCTCGCATACTCCCCCATGTACCACGCGCGC
TTGTTCCGTGAGCAAGCGAATGTCCGCGTACAGCACTTCCACCCAACTCG
CGCTGCCGCCGGCAAAGGCGAGGATGAATCGCCGTATCTCGACGGAAACC
CTTCGTTCGATCGGCCTCTATTCGTACAATTCTGCGCCAATGATCCTGAT
GATTTCTTGGAGGCCGCGCGTCATGTGGCACCATATTGCGATGCAGTGGA
TCTCAATCTGGGATGTCCCCAAGGTATTGCGAAGAGGGGTCACTATGGTG
CTTTCCTTCAGGAGGACTGGGACCTGATTTACAGGCTGATTAACCGACTT
CACAACGAACTCTCGATCCCAGTCACTGCCAAGTTTCGTATTCAGGAAAC
GAAAGAGAAAACGCTCGAATATGCGAAGATGATCTTGTCTGCTGGTGCAA
ACATAATCACTGTGCATGGACGGAGAAGAGAACAGAAAGGTCACAACACT
GGACTGGCTGATTGGAGCTACATTCGCTATCTCCGCGATAATCTTCCCCC
AGAGACGGTCATCTTCGCGAACGGCAACAACCTGAACTATGAAGATCTGG
ACCGTTGTCTGGAAGAGACAGGAGCCGATGGTGTCATGAGTGCGGAAGGC
AACTTGTCTGATCCGTCAATTTTCAGCAAGCCCCCTCCGGTTGGCAGTGA
AGGAAGGGAATACTGGCGAGGCAGGGACGGAAAGGGCGGATATCGGATTG
ACGCCATGCTACGGCGGTACTTGGACATCATTTACAAGTACGTTCTTGAA
CAACCTGTTCCGGAAAGGAAGCCTCTTTGGCTTCCCTCGGACGCAGTGGA
AGAGGAATTTGAACAGACAACCGAAACGACCGAGGAAGCAGAAGACGGCC
CACCTAAGAAGAAGCAAAAGCGCGAGAAGTCGAAGAGAGCGGCCTCCCCC
AGTCTTGGTGTAATGCAGGGTCATCTCTTCCAGCTGCTTCGCCCCATGGT
CTCCGTGCATACCAATGTCCGTGATGCGCTAGCGAGATCAAGACCTGGCG
ATATGCCCGCATTCGAGAATGTCTTGGCTCTCGTTGAGCAGGCAATCAAG
AAGGGTCTCAAGGAATACGAGCAGTTCCCGGAACGCTTTGAGAAGGATCC
GAACCAAGAACTGACCGGATCCAAAGCGACTATTGCCGAGTACGGCAGAC
CTTGGTGGATCTGCCAGCCACACATTCGGCCACTGCCTGAAGAGGCTGTC
GAGCTGGGCGCACTTACTGTGAAGAAGAAGAACGATGGCAACGAAAAGCC
TAAGGCGGACGAGTCTTCTGAAAAGGCCACCCCTGCTGCAGAGGGTTCTG
CCACTCCTTCGAAGTCGGACGTGGACGCGACCACCCCTGCCACGACGACT
ACTCCGGACAACCTGGTGAGCGGTTGATATTACGAATCAAGATTCGGTGT
TTTTCAGCGGAGTATTGGGACCAGCATCTTATACCCAAGTCGGGCATAGC
TACTATTCATGTTAGATATAGACGCATACAGAGCACATAGTACATAGAGC
TACGTTTATGAAATCATAATTCTCAACCTCGCTTGACACTCATCAAACTT
AGTATCACTTAGAGTACAAACACTGGTATCATAAGCCATATCAGAATAAA
CCCAAATCCGTAAAACTCCATCCTAGCCCATATAAAACATAAGCCCATCT
AGAAATCCATCACAAGCTGCGGCGCCATCTTCTCCAAATCCTCAACCTAA
CCCAATAATAGTCAGCAAACACAAATACACTAAATAATTACAAAAGAAGA
GAAAGAGAAGAAGAGAGAGCAAACCTCCAAAAACCCATCCCCGACCGCTG
CCCCCTTCCCCACAGCCTCGCTCCTCTCAAACGCCGCCCTCGCCAACGCC
TCTCTTACAAAAACATCCACATACTTTGCGACAACCGTATTCGCATCCTT
CGCGATCTTGGTCTTCTCATTCTGAAAATGATGATGCAGTAGCCTTGTCA
ACAACTTCGGCGGAATGACAGGATCGTTCGTGAGCACATCATCAGATGGC
TGATCCTTGTGAATGATCTCCGCAAGGATATAGTCCGGTTCTGGTTCTGG
TTCCGGCGATGATGCGTCCGAGCGGGCGGAGGACGAAGAGGCGTTATCGT
TGTCGCTGTCTTCTTCGGAGTCAGCAGGGCTGGGTGATGATGGTCGGGGG
CGTGCGGATTTGGATGAGGAGGCTTTTGCTGGTTTAGGAGCTTGTTTGGT
TGTTGGTTTAGTTGTGGCTTTGGTTTTGGGCTTCTCGGCTGGTTTGGCTT
TGGATTTGCTGGTGGTTGCTGCGGCGGTTGATGATGATGATGCTGGGGCG
GCGGTGGAGGAGGTTCGGCTTGGTGGTTTGAAGGGGAGTTGTCTGCGCTT
TTGCGCGGGTTTTCGCTCGGGGGGCATGGTGTGTTGGTTGTTTGTATTGA
GGGCCCTTCTTTGGTGGTTAATTGATGATGATAAGGCGTCTCGTCGCGGG
GATTTGATCTTCTTGCGCGGAGCGCGGTCCGTGACGCGTGGTCAGGTG
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Coding sequence (CDS) from alignment at ch7:4374109..4377056-

>KJC3_010790-T1 ID=KJC3_010790-T1|Name=KJC3_010790-T1|organism=Aspergillus niger KJC3|type=CDS|length=3258bp|location=Sequence derived from alignment at ch7:4374109..4377056- (Aspergillus niger KJC3)
GCGTGGCGCATGCTCACTAGGTCGTTCATGACACCGGAAGACCAGAAAAA
GGTTCTCGCATACTCCCCCATGTACCACGCGCGCTTGTTCCGTGAGCAAG
CGAATGTCCGCGTACAGCACTTCCACCCAACTCGCGCTGCCGCCGGCAAA
GGCGAGGATGAATCGCCGTATCTCGACGGAAACCCTTCGTTCGATCGGCC
TCTATTCGTACAATTCTGCGCCAATGATCCTGATGATTTCTTGGAGGCCG
CGCGTCATGTGGCACCATATTGCGATGCAGTGGATCTCAATCTGGGATGT
CCCCAAGGTATTGCGAAGAGGGGTCACTATGGTGCTTTCCTTCAGGAGGA
CTGGGACCTGATTTACAGGCTGATTAACCGACTTCACAACGAACTCTCGA
TCCCAGTCACTGCCAAGTTTCGTATTCAGGAAACGAAAGAGAAAACGCTC
GAATATGCGAAGATGATCTTGTCTGCTGGTGCAAACATAATCACTGTGCA
TGGACGGAGAAGAGAACAGAAAGGTCACAACACTGGACTGGCTGATTGGA
GCTACATTCGCTATCTCCGCGATAATCTTCCCCCAGAGACGGTCATCTTC
GCGAACGGCAACAACCTGAACTATGAAGATCTGGACCGTTGTCTGGAAGA
GACAGGAGCCGATGGTGTCATGAGTGCGGAAGGCAACTTGTCTGATCCGT
CAATTTTCAGCAAGCCCCCTCCGGTTGGCAGTGAAGGAAGGGAATACTGG
CGAGGCAGGGACGGAAAGGGCGGATATCGGATTGACGCCATGCTACGGCG
GTACTTGGACATCATTTACAAGTACGTTCTTGAACAACCTGTTCCGGAAA
GGAAGCCTCTTTGGCTTCCCTCGGACGCAGTGGAAGAGGAATTTGAACAG
ACAACCGAAACGACCGAGGAAGCAGAAGACGGCCCACCTAAGAAGAAGCA
AAAGCGCGAGAAGTCGAAGAGAGCGGCCTCCCCCAGTCTTGGTGTAATGC
AGGGTCATCTCTTCCAGCTGCTTCGCCCCATGGTCTCCGTGCATACCAAT
GTCCGTGATGCGCTAGCGAGATCAAGACCTGGCGATATGCCCGCATTCGA
GAATGTCTTGGCTCTCGTTGAGCAGGCAATCAAGAAGGGTCTCAAGGAAT
ACGAGCAGTTCCCGGAACGCTTTGAGAAGGATCCGAACCAAGAACTGACC
GGATCCAAAGCGACTATTGCCGAGTACGGCAGACCTTGGTGGATCTGCCA
GCCACACATTCGGCCACTGCCTGAAGAGGCTGTCGAGCTGGGCGCACTTA
CTGTGAAGAAGAAGAACGATGGCAACGAAAAGCCTAAGGCGGACGAGTCT
TCTGAAAAGGCCACCCCTGCTGCAGAGGGTTCTGCCACTCCTTCGAAGTC
GGACGTGGACGCGACCACCCCTGCCACGACGACTACTCCGGACAACCTGG
TGAGCGGTTGAATGGCGGTCCCGGAGACACAGCCCGCTCCGCAAGGAAGC
GTTGCCGACCAGAATGCGCCTATAGCTGCTGCTGCTGAACCGAGAAAGAA
GCTCCTTGGAAGACAGTTCTACGAAAGTATTGGAAGCCCGAAGTACATTA
TTGCACCTATGGTGGACCGGTCTGAGTTTGCGTGGCGCATGCTCACTAGG
TCGTTCATGACACCGGAAGACCAGAAAAAGGTTCTCGCATACTCCCCCAT
GTACCACGCGCGCTTGTTCCGTGAGCAAGCGAATGTCCGCGTACAGCACT
TCCACCCAACTCGCGCTGCCGCCGGCAAAGGCGAGGATGAATCGCCGTAT
CTCGACGGAAACCCTTCGTTCGATCGGCCTCTATTCGTACAATTCTGCGC
CAATGATCCTGATGATTTCTTGGAGGCCGCGCGTCATGTGGCACCATATT
GCGATGCAGTGGATCTCAATCTGGGATGTCCCCAAGGTATTGCGAAGAGG
GGTCACTATGGTGCTTTCCTTCAGGAGGACTGGGACCTGATTTACAGGCT
GATTAACCGACTTCACAACGAACTCTCGATCCCAGTCACTGCCAAGTTTC
GTATTCAGGAAACGAAAGAGAAAACGCTCGAATATGCGAAGATGATCTTG
TCTGCTGGTGCAAACATAATCACTGTGCATGGACGGAGAAGAGAACAGAA
AGGTCACAACACTGGACTGGCTGATTGGAGCTACATTCGCTATCTCCGCG
ATAATCTTCCCCCAGAGACGGTCATCTTCGCGAACGGCAACAACCTGAAC
TATGAAGATCTGGACCGTTGTCTGGAAGAGACAGGAGCCGATGGTGTCAT
GAGTGCGGAAGGCAACTTGTCTGATCCGTCAATTTTCAGCAAGCCCCCTC
CGGTTGGCAGTGAAGGAAGGGAATACTGGCGAGGCAGGGACGGAAAGGGC
GGATATCGGATTGACGCCATGCTACGGCGGTACTTGGACATCATTTACAA
GTACGTTCTTGAACAACCTGTTCCGGAAAGGAAGCCTCTTTGGCTTCCCT
CGGACGCAGTGGAAGAGGAATTTGAACAGACAACCGAAACGACCGAGGAA
GCAGAAGACGGCCCACCTAAGAAGAAGCAAAAGCGCGAGAAGTCGAAGAG
AGCGGCCTCCCCCAGTCTTGGTGTAATGCAGGGTCATCTCTTCCAGCTGC
TTCGCCCCATGGTCTCCGTGCATACCAATGTCCGTGATGCGCTAGCGAGA
TCAAGACCTGGCGATATGCCCGCATTCGAGAATGTCTTGGCTCTCGTTGA
GCAGGCAATCAAGAAGGGTCTCAAGGAATACGAGCAGTTCCCGGAACGCT
TTGAGAAGGATCCGAACCAAGAACTGACCGGATCCAAAGCGACTATTGCC
GAGTACGGCAGACCTTGGTGGATCTGCCAGCCACACATTCGGCCACTGCC
TGAAGAGGCTGTCGAGCTGGGCGCACTTACTGTGAAGAAGAAGAACGATG
GCAACGAAAAGCCTAAGGCGGACGAGTCTTCTGAAAAGGCCACCCCTGCT
GCAGAGGGTTCTGCCACTCCTTCGAAGTCGGACGTGGACGCGACCACCCC
TGCCACGACGACTACTCCGGACAACCTGGTGAGCGGTTGAATGGCGGTCC
CGGAGACACAGCCCGCTCCGCAAGGAAGCGTTGCCGACCAGAATGCGCCT
ATAGCTGCTGCTGCTGAACCGAGAAAGAAGCTCCTTGGAAGACAGTTCTA
CGAAAGTATTGGAAGCCCGAAGTACATTATTGCACCTATGGTGGACCGGT
CTGAGTTT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008033tRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0050660flavin adenine dinucleotide binding
GO:0017150tRNA dihydrouridine synthase activity
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010790KJC3_010790Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010790-T1KJC3_010790-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010790-T1.cdsKJC3_010790-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010790-T1.utr3p1KJC3_010790-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010790-T1.exon2KJC3_010790-T1.exon2Aspergillus niger KJC3exon
KJC3_010790-T1.exon1KJC3_010790-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010790-T1.utr5p1KJC3_010790-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09262Q6S
DBxrefInterPro:IPR035587
DBxrefInterPro:IPR018517
DBxrefInterPro:IPR001269
DBxrefInterPro:IPR013785
DBxrefPFAM:PF01207
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:4374109..4377056 -
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