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KJC3_010792-T1, KJC3_010792-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010792-T1
Unique NameKJC3_010792-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:4379331..4380451+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010792-T1 ID=KJC3_010792-T1|Name=KJC3_010792-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1121bp|location=Sequence derived from alignment at ch7:4379331..4380451+ (Aspergillus niger KJC3)
ATGCCTTTGGGTACTACCAATGTATAGCAGTTTCTCATACTATACTTCAG
TATACTATCGAACAGCCCGCTCCATACAAACAGGGGTATGCCGATCGACC
AATCACAGCGGGTATCGCAGCAGCCAATGCTAACCGAGCGGCACCGACAG
CCCAGGGCTTAGGGTTCATCCGCACGTGACGCTGAGTCATCCCCCACTCG
AATTTCGCACTTGGGCACTCAAACTTCAGACCGTTCGATCTGTTGTGCAG
CTCTCCTCCGTCGAACAGCTACATCAGACAGTCAAAATGGTGAGTACCAT
GAGCCCCGAGTAGACTCGAGTGCAGAAGGGGGAAATGTATCAGTACTAAT
ATTATACGCAGGCTCCTACCAGAAAGAAGTGGTCCAAGGGCAAGGGTACG
CTATAATTCCCCGTTTCCATCCTCATCACCATCACCATGAATATCATCCA
TTTCCCCCCATCGAGTTGAAGAGTCGAAGATCGCCTGTTATTGTATCGAT
CGAAGAGCAAAAAGAAAAGAAATATATATACCCCGATAGCTATGGATGGA
TATCACACACACAACGCACAAGATGAAAGAATGCGATCGATCGCGAAAAC
CGAGACAAAATGAAACAGAAGAGAGATGACTGACATGGCTTTTTTTCTTC
GATTATAGTCAAGGACAAGGCCCAGCACGCCGTCGTCCTCGAGAAGCAGG
TCGCTGAGCGTCTCAACAAGGATGTCCAGTCCTACCGTCTGATCACTGTC
GCCACTCTGGTCGACCGTCTCAAGATCAACGGCAGCTTGGCCCGCCAGTG
CCTTGCTGACCTTGAGGAGAAGGGACAGATCAAGAAGGTTGTTGGTCACT
CCAAGATGAACGTCTACAGTATGTTCCCACCCCCCACCCTTTGAATCGAT
CTGGTATATGTGATGGAATGCTGACGTTGGTGTAATAGCCCGCGCCGTCA
CCGCCGAGTAAACGTATGACGCTATGAATATTTTTCCTCGCGCGTCGCAT
TTTTCTTTGTGCAACGATATGATATCACTCGAATGAAAATTCGGAAAGTC
GGGCTGGGCGATTTGATGGACATGTCATGTTAGAATATGACTGACTGGAA
TTCAACCAAAATCTGTTCCAA
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Coding sequence (CDS) from alignment at ch7:4379331..4380451+

>KJC3_010792-T1 ID=KJC3_010792-T1|Name=KJC3_010792-T1|organism=Aspergillus niger KJC3|type=CDS|length=2055bp|location=Sequence derived from alignment at ch7:4379331..4380451+ (Aspergillus niger KJC3)
ATGCCTTTGGGGCTTAGGGTTCATCCGCACGTGACGCTGAGTCATCCCCC
ACTCGAATTTCGCACTTGGGCACTCAAACTTCAGACCGTTCGATCTGTTG
TGCAGCTCTCCTCCGTCGAACAGCTACATCAGACAGTCAAAATGGCTCCT
ACCAGAAAGAAGTGGTCCAAGGGCAAGGTCAAGGACAAGGCCCAGCACGC
CGTCGTCCTCGAGAAGCAGGTCGCTGAGCGTCTCAACAAGGATGTCCAGT
CCTACCGTCTGATCACTGTCGCCACTCTGGTCGACCGTCTCAAGATCAAC
GGCAGCTTGGCCCGCCAGTGCCTTGCTGACCTTGAGGAGAAGGGACAGAT
CAAGAAGGTTGTTGGTCACTCCAAGATGAACGTCTACACCCGCGCCGTCA
CCGCCGAGTAAATGCCTTTGGGGCTTAGGGTTCATCCGCACGTGACGCTG
AGTCATCCCCCACTCGAATTTCGCACTTGGGCACTCAAACTTCAGACCGT
TCGATCTGTTGTGCAGCTCTCCTCCGTCGAACAGCTACATCAGACAGTCA
AAATGGCTCCTACCAGAAAGAAGTGGTCCAAGGGCAAGGTCAAGGACAAG
GCCCAGCACGCCGTCGTCCTCGAGAAGCAGGTCGCTGAGCGTCTCAACAA
GGATGTCCAGTCCTACCGTCTGATCACTGTCGCCACTCTGGTCGACCGTC
TCAAGATCAACGGCAGCTTGGCCCGCCAGTGCCTTGCTGACCTTGAGGAG
AAGGGACAGATCAAGAAGGTTGTTGGTCACTCCAAGATGAACGTCTACAC
CCGCGCCGTCACCGCCGAGTAAATGCCTTTGGGGCTTAGGGTTCATCCGC
ACGTGACGCTGAGTCATCCCCCACTCGAATTTCGCACTTGGGCACTCAAA
CTTCAGACCGTTCGATCTGTTGTGCAGCTCTCCTCCGTCGAACAGCTACA
TCAGACAGTCAAAATGGCTCCTACCAGAAAGAAGTGGTCCAAGGGCAAGG
TCAAGGACAAGGCCCAGCACGCCGTCGTCCTCGAGAAGCAGGTCGCTGAG
CGTCTCAACAAGGATGTCCAGTCCTACCGTCTGATCACTGTCGCCACTCT
GGTCGACCGTCTCAAGATCAACGGCAGCTTGGCCCGCCAGTGCCTTGCTG
ACCTTGAGGAGAAGGGACAGATCAAGAAGGTTGTTGGTCACTCCAAGATG
AACGTCTACACCCGCGCCGTCACCGCCGAGTAAATGCCTTTGGGGCTTAG
GGTTCATCCGCACGTGACGCTGAGTCATCCCCCACTCGAATTTCGCACTT
GGGCACTCAAACTTCAGACCGTTCGATCTGTTGTGCAGCTCTCCTCCGTC
GAACAGCTACATCAGACAGTCAAAATGGCTCCTACCAGAAAGAAGTGGTC
CAAGGGCAAGGTCAAGGACAAGGCCCAGCACGCCGTCGTCCTCGAGAAGC
AGGTCGCTGAGCGTCTCAACAAGGATGTCCAGTCCTACCGTCTGATCACT
GTCGCCACTCTGGTCGACCGTCTCAAGATCAACGGCAGCTTGGCCCGCCA
GTGCCTTGCTGACCTTGAGGAGAAGGGACAGATCAAGAAGGTTGTTGGTC
ACTCCAAGATGAACGTCTACACCCGCGCCGTCACCGCCGAGTAAATGCCT
TTGGGGCTTAGGGTTCATCCGCACGTGACGCTGAGTCATCCCCCACTCGA
ATTTCGCACTTGGGCACTCAAACTTCAGACCGTTCGATCTGTTGTGCAGC
TCTCCTCCGTCGAACAGCTACATCAGACAGTCAAAATGGCTCCTACCAGA
AAGAAGTGGTCCAAGGGCAAGGTCAAGGACAAGGCCCAGCACGCCGTCGT
CCTCGAGAAGCAGGTCGCTGAGCGTCTCAACAAGGATGTCCAGTCCTACC
GTCTGATCACTGTCGCCACTCTGGTCGACCGTCTCAAGATCAACGGCAGC
TTGGCCCGCCAGTGCCTTGCTGACCTTGAGGAGAAGGGACAGATCAAGAA
GGTTGTTGGTCACTCCAAGATGAACGTCTACACCCGCGCCGTCACCGCCG
AGTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS25KJC3_010792Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010792-T1KJC3_010792-T1-proteinAspergillus niger KJC3polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010792-T1.exon1KJC3_010792-T1.exon1Aspergillus niger KJC3exon
KJC3_010792-T1.exon2KJC3_010792-T1.exon2Aspergillus niger KJC3exon
KJC3_010792-T1.exon3KJC3_010792-T1.exon3Aspergillus niger KJC3exon
KJC3_010792-T1.exon4KJC3_010792-T1.exon4Aspergillus niger KJC3exon
KJC3_010792-T1.exon5KJC3_010792-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010792-T1.cdsKJC3_010792-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010792-T1.utr3p1KJC3_010792-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR004977
DBxrefPFAM:PF03297
Product40S ribosomal protein S25
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:4379331..4380451 +
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