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KJC3_010802-T1, KJC3_010802-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010802-T1
Unique NameKJC3_010802-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:4409128..4409980+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010802-T1 ID=KJC3_010802-T1|Name=KJC3_010802-T1|organism=Aspergillus niger KJC3|type=mRNA|length=853bp|location=Sequence derived from alignment at ch7:4409128..4409980+ (Aspergillus niger KJC3)
ATGTATACCCAGCGACCGTTGGCGTATGCCCCTACGCCGTATAGCTATAC
GCCCAACCCAGCGTTGGCGGCGTCTATCAACCTTGATGAAGTGAGTCGTC
TGGAGGTTGGAGAGTGGTGCTAGATTAGGACTGACTGTTGCGGCAGGAAG
TAAAACTAGCCTCCAGCGCTGCGGAGCGGGATCTCTACGAGTCGTTGGCT
GAAATCTACGGCATCATCGTCACTCTGGATGGCCTGGAGAAAGCTTATAT
CAAAGATGTGGTTACGGAAGCAGAGTACACGGAGACATGTACCCGGCTCT
TGAAGCAGTACAAGTCCAGTTTGGGTGATGAAACTGTTGCAAATGAGTTC
GTCGATCTAGAGACCTTCAAACGCACCTGGGAGGTGAGTATTACTATCGT
GTGCTTACAGTAAGACGATAGCTGATCACCTGGTTTTCTTTTGTGTAGCT
GGAATGCCCTCGCGCCACCGAACGTCTCCGCATTGGCCTCCCCGCGACAG
TCGAACAAGCCTCCCACAGCACACCCGCCGCGAACATGGCTCCAGCAGCT
GCAGGCCCTGCAGGAGCATCTGGTAGTCTGATATTGACGGCTACTGAGAA
TTTCATCACCTTCTTGGATGCGCTGAAGCTGAACATGGTGTCCAAGGACG
CACTGCACCCGCTTTTGTCGGAAGTGATCCAATCCGTCAATAAAGTCACC
GATGTCGATTTCGAGAACCGGGGCAAGATCATCCAATGGCTGATCACCTT
GAATCAGATGCGTGCAACCGAGGAACTCGGTGAAGACCAGGCTCGGGAGT
TGGCGTTCGACATTGAACAAGCATACCTGGGATTCAAGGCCACTTTGGGT
TGA
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Coding sequence (CDS) from alignment at ch7:4409128..4409980+

>KJC3_010802-T1 ID=KJC3_010802-T1|Name=KJC3_010802-T1|organism=Aspergillus niger KJC3|type=CDS|length=2196bp|location=Sequence derived from alignment at ch7:4409128..4409980+ (Aspergillus niger KJC3)
ATGTATACCCAGCGACCGTTGGCGTATGCCCCTACGCCGTATAGCTATAC
GCCCAACCCAGCGTTGGCGGCGTCTATCAACCTTGATGAAGAAGTAAAAC
TAGCCTCCAGCGCTGCGGAGCGGGATCTCTACGAGTCGTTGGCTGAAATC
TACGGCATCATCGTCACTCTGGATGGCCTGGAGAAAGCTTATATCAAAGA
TGTGGTTACGGAAGCAGAGTACACGGAGACATGTACCCGGCTCTTGAAGC
AGTACAAGTCCAGTTTGGGTGATGAAACTGTTGCAAATGAGTTCGTCGAT
CTAGAGACCTTCAAACGCACCTGGGAGCTGGAATGCCCTCGCGCCACCGA
ACGTCTCCGCATTGGCCTCCCCGCGACAGTCGAACAAGCCTCCCACAGCA
CACCCGCCGCGAACATGGCTCCAGCAGCTGCAGGCCCTGCAGGAGCATCT
GGTAGTCTGATATTGACGGCTACTGAGAATTTCATCACCTTCTTGGATGC
GCTGAAGCTGAACATGGTGTCCAAGGACGCACTGCACCCGCTTTTGTCGG
AAGTGATCCAATCCGTCAATAAAGTCACCGATGTCGATTTCGAGAACCGG
GGCAAGATCATCCAATGGCTGATCACCTTGAATCAGATGCGTGCAACCGA
GGAACTCGGTGAAGACCAGGCTCGGGAGTTGGCGTTCGACATTGAACAAG
CATACCTGGGATTCAAGGCCACTTTGGGTTGAATGTATACCCAGCGACCG
TTGGCGTATGCCCCTACGCCGTATAGCTATACGCCCAACCCAGCGTTGGC
GGCGTCTATCAACCTTGATGAAGAAGTAAAACTAGCCTCCAGCGCTGCGG
AGCGGGATCTCTACGAGTCGTTGGCTGAAATCTACGGCATCATCGTCACT
CTGGATGGCCTGGAGAAAGCTTATATCAAAGATGTGGTTACGGAAGCAGA
GTACACGGAGACATGTACCCGGCTCTTGAAGCAGTACAAGTCCAGTTTGG
GTGATGAAACTGTTGCAAATGAGTTCGTCGATCTAGAGACCTTCAAACGC
ACCTGGGAGCTGGAATGCCCTCGCGCCACCGAACGTCTCCGCATTGGCCT
CCCCGCGACAGTCGAACAAGCCTCCCACAGCACACCCGCCGCGAACATGG
CTCCAGCAGCTGCAGGCCCTGCAGGAGCATCTGGTAGTCTGATATTGACG
GCTACTGAGAATTTCATCACCTTCTTGGATGCGCTGAAGCTGAACATGGT
GTCCAAGGACGCACTGCACCCGCTTTTGTCGGAAGTGATCCAATCCGTCA
ATAAAGTCACCGATGTCGATTTCGAGAACCGGGGCAAGATCATCCAATGG
CTGATCACCTTGAATCAGATGCGTGCAACCGAGGAACTCGGTGAAGACCA
GGCTCGGGAGTTGGCGTTCGACATTGAACAAGCATACCTGGGATTCAAGG
CCACTTTGGGTTGAATGTATACCCAGCGACCGTTGGCGTATGCCCCTACG
CCGTATAGCTATACGCCCAACCCAGCGTTGGCGGCGTCTATCAACCTTGA
TGAAGAAGTAAAACTAGCCTCCAGCGCTGCGGAGCGGGATCTCTACGAGT
CGTTGGCTGAAATCTACGGCATCATCGTCACTCTGGATGGCCTGGAGAAA
GCTTATATCAAAGATGTGGTTACGGAAGCAGAGTACACGGAGACATGTAC
CCGGCTCTTGAAGCAGTACAAGTCCAGTTTGGGTGATGAAACTGTTGCAA
ATGAGTTCGTCGATCTAGAGACCTTCAAACGCACCTGGGAGCTGGAATGC
CCTCGCGCCACCGAACGTCTCCGCATTGGCCTCCCCGCGACAGTCGAACA
AGCCTCCCACAGCACACCCGCCGCGAACATGGCTCCAGCAGCTGCAGGCC
CTGCAGGAGCATCTGGTAGTCTGATATTGACGGCTACTGAGAATTTCATC
ACCTTCTTGGATGCGCTGAAGCTGAACATGGTGTCCAAGGACGCACTGCA
CCCGCTTTTGTCGGAAGTGATCCAATCCGTCAATAAAGTCACCGATGTCG
ATTTCGAGAACCGGGGCAAGATCATCCAATGGCTGATCACCTTGAATCAG
ATGCGTGCAACCGAGGAACTCGGTGAAGACCAGGCTCGGGAGTTGGCGTT
CGACATTGAACAAGCATACCTGGGATTCAAGGCCACTTTGGGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000813ESCRT I complex
Vocabulary: Biological Process
TermDefinition
GO:0032509endosome transport via multivesicular body sorting pathway
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010802KJC3_010802Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010802-T1.exon1KJC3_010802-T1.exon1Aspergillus niger KJC3exon
KJC3_010802-T1.exon2KJC3_010802-T1.exon2Aspergillus niger KJC3exon
KJC3_010802-T1.exon3KJC3_010802-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010802-T1.cdsKJC3_010802-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010802-T1KJC3_010802-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR037202
DBxrefInterPro:IPR017899
DBxrefInterPro:IPR017898
DBxrefInterPro:IPR038358
DBxrefInterPro:IPR007143
DBxrefInterPro:IPR037206
DBxrefPFAM:PF03997
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:4409128..4409980 +
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