You are here

Home

KJC3_010843-T1, KJC3_010843-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010843-T1
Unique NameKJC3_010843-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:4501355..4503169+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010843-T1 ID=KJC3_010843-T1|Name=KJC3_010843-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1815bp|location=Sequence derived from alignment at ch7:4501355..4503169+ (Aspergillus niger KJC3)
CGCCAATGCAATTTTCCGACGCGAGGTACGTTGCTTGGCAACACCGCTAG
ATTTGGGGGGCATCTTGTCCCTACCTGAGGCTAAATCGAAGAGCTCAATT
TGTTGGTCCAGGTAATTGCATTTCGATGTTATTCAGGAGCCAGCCAGCTG
GCCGTTGTGGCACCGGTCAGCTGATTGTGGAGGGGCTCCGGAACGATCCG
AAGTTCTCCACGCTGCGACAATACGCTGCTCTTCTCAGAGACCAGTATTC
TACTAGGATACGCCATGCTTAAAAGCTGTGGAGGTTTCCTTACTCCAACT
TCTTACCATGTCTCCTTGTTCCCATTGCGAAGCAGCGAGTAATTCTGGCC
GAGTCCCGACAGCTGGCCGGCTATCTCGGCAAACCTGGTAAACCTTCTGC
TCGGGTTGCACCCGATGAGGGGGCGCAGTGGCTGAACTTGGATTATTTAT
ATCCTGTATATTATATCACGATCTTCCTTCAATTATCTTCTCGTGCCATT
ACAGGGAAAACTTTTTCTGAGCCTCGTCTGTCGTTAGAACCAATGTCGAA
GATTGATACTCATCATCACTTTGTGCCGCAGTTCTATGCCGAAGGTACGT
CTGAACCGCGTTCGCCCGGACTATATCTAATCCTATATCCATACTGATTC
AACGATTTTCATATGAATAGCGGTCGAAAATGCGGGAGGTGACCCCTCTG
GCTGGCCAACTCCGAAATGGAGCGCTGAAGCATCATTGGCTTCTATGAAT
AAGAATGGCACACAGAAAGCGATCTTGTCTCTAACAGCTCCCGGAGCTGT
CATCGCCCCGGACGACAGCAGCCGACGCAACTTGGCCCGACAGGCAAACG
AACATGCGGCTCACTTGAGGGATGAACAACCCGAGAGATTCGGATTCTTC
GCGGCATTGCCATGCCTGCTAGACACTGAGGGCGCATTGGAAGAAATTCG
GTATAGCCTAGACATACTCAAAGCCGAGGGCGTCACTCTTTTCACTAGAT
ACGGCACCGGGAATCATTACCTGGGTCACCCAGACTTTCGCCCCATCTGG
GAGGATCTCAACCGTCGCAAAGCCGTTGTGTTCATTCACCCGACTCATCC
GGTTGATACCAACCGCGTCAACCCCCAACTACCTCAACCGGCTATTGATT
ACCCTCATGAAACCACCCGCACTGCTGTGGACCTTCTCACTACGGGAACA
AAAGCGGCCTTTCCGGACTGCAAGATTATCCTTTCTCACGCCGGTGGCAC
CCTTCCCTACCTGATCTCCCGCCTAACCACCGTCACCAAAGACCCTGAAA
TGGAGTACAAACCCTATGAGCGTGGCCCAAACGAGATGGTCGAAGACTTC
AAATCATTTTACTTTGACCTCGCTCTTTCCAGCTCCCCGGCAGTGCTGAC
TCTTCTGCTGAGCCTCGTGCCTCATGATCACATTGTATACGGTAAGTCAA
CCATTTCCCCAGAAGACCCATCAGATACAATAGTGCAATTTGATGCTGAC
ATCTGCAGGTTCCGACTTTCCTTACGCTAACAACAATAAAATTGCTGGGT
TCAAGGAGGCTTTGGACGAATACCCACTGGATCAAGAATTGAGGGACCGT
ATCTACTATGCAAATGCCCAGAAACTTCTTTCTCGTTATTGAGCGATACG
TCAGCAGTTTCTTGAGAGTACAAAATGAGCAACAGTTTTGTATATGAACT
CATACATTCATTACAGTACATAGTATGCTACCAGAAACCTATAGCCCTTG
AGCACACACCATGTTTCGGTAGTTAAAACGTGATAGGATAACCAAACAAC
AAGCATGAAAAGGAG
back to top

Coding sequence (CDS) from alignment at ch7:4501355..4503169+

>KJC3_010843-T1 ID=KJC3_010843-T1|Name=KJC3_010843-T1|organism=Aspergillus niger KJC3|type=CDS|length=2871bp|location=Sequence derived from alignment at ch7:4501355..4503169+ (Aspergillus niger KJC3)
ATGTCGAAGATTGATACTCATCATCACTTTGTGCCGCAGTTCTATGCCGA
AGCGGTCGAAAATGCGGGAGGTGACCCCTCTGGCTGGCCAACTCCGAAAT
GGAGCGCTGAAGCATCATTGGCTTCTATGAATAAGAATGGCACACAGAAA
GCGATCTTGTCTCTAACAGCTCCCGGAGCTGTCATCGCCCCGGACGACAG
CAGCCGACGCAACTTGGCCCGACAGGCAAACGAACATGCGGCTCACTTGA
GGGATGAACAACCCGAGAGATTCGGATTCTTCGCGGCATTGCCATGCCTG
CTAGACACTGAGGGCGCATTGGAAGAAATTCGGTATAGCCTAGACATACT
CAAAGCCGAGGGCGTCACTCTTTTCACTAGATACGGCACCGGGAATCATT
ACCTGGGTCACCCAGACTTTCGCCCCATCTGGGAGGATCTCAACCGTCGC
AAAGCCGTTGTGTTCATTCACCCGACTCATCCGGTTGATACCAACCGCGT
CAACCCCCAACTACCTCAACCGGCTATTGATTACCCTCATGAAACCACCC
GCACTGCTGTGGACCTTCTCACTACGGGAACAAAAGCGGCCTTTCCGGAC
TGCAAGATTATCCTTTCTCACGCCGGTGGCACCCTTCCCTACCTGATCTC
CCGCCTAACCACCGTCACCAAAGACCCTGAAATGGAGTACAAACCCTATG
AGCGTGGCCCAAACGAGATGGTCGAAGACTTCAAATCATTTTACTTTGAC
CTCGCTCTTTCCAGCTCCCCGGCAGTGCTGACTCTTCTGCTGAGCCTCGT
GCCTCATGATCACATTGTATACGGTTCCGACTTTCCTTACGCTAACAACA
ATAAAATTGCTGGGTTCAAGGAGGCTTTGGACGAATACCCACTGGATCAA
GAATTGAGGGACCGTATCTACTATGCAAATGCCCAGAAACTTCTTTCTCG
TTATTGAATGTCGAAGATTGATACTCATCATCACTTTGTGCCGCAGTTCT
ATGCCGAAGCGGTCGAAAATGCGGGAGGTGACCCCTCTGGCTGGCCAACT
CCGAAATGGAGCGCTGAAGCATCATTGGCTTCTATGAATAAGAATGGCAC
ACAGAAAGCGATCTTGTCTCTAACAGCTCCCGGAGCTGTCATCGCCCCGG
ACGACAGCAGCCGACGCAACTTGGCCCGACAGGCAAACGAACATGCGGCT
CACTTGAGGGATGAACAACCCGAGAGATTCGGATTCTTCGCGGCATTGCC
ATGCCTGCTAGACACTGAGGGCGCATTGGAAGAAATTCGGTATAGCCTAG
ACATACTCAAAGCCGAGGGCGTCACTCTTTTCACTAGATACGGCACCGGG
AATCATTACCTGGGTCACCCAGACTTTCGCCCCATCTGGGAGGATCTCAA
CCGTCGCAAAGCCGTTGTGTTCATTCACCCGACTCATCCGGTTGATACCA
ACCGCGTCAACCCCCAACTACCTCAACCGGCTATTGATTACCCTCATGAA
ACCACCCGCACTGCTGTGGACCTTCTCACTACGGGAACAAAAGCGGCCTT
TCCGGACTGCAAGATTATCCTTTCTCACGCCGGTGGCACCCTTCCCTACC
TGATCTCCCGCCTAACCACCGTCACCAAAGACCCTGAAATGGAGTACAAA
CCCTATGAGCGTGGCCCAAACGAGATGGTCGAAGACTTCAAATCATTTTA
CTTTGACCTCGCTCTTTCCAGCTCCCCGGCAGTGCTGACTCTTCTGCTGA
GCCTCGTGCCTCATGATCACATTGTATACGGTTCCGACTTTCCTTACGCT
AACAACAATAAAATTGCTGGGTTCAAGGAGGCTTTGGACGAATACCCACT
GGATCAAGAATTGAGGGACCGTATCTACTATGCAAATGCCCAGAAACTTC
TTTCTCGTTATTGAATGTCGAAGATTGATACTCATCATCACTTTGTGCCG
CAGTTCTATGCCGAAGCGGTCGAAAATGCGGGAGGTGACCCCTCTGGCTG
GCCAACTCCGAAATGGAGCGCTGAAGCATCATTGGCTTCTATGAATAAGA
ATGGCACACAGAAAGCGATCTTGTCTCTAACAGCTCCCGGAGCTGTCATC
GCCCCGGACGACAGCAGCCGACGCAACTTGGCCCGACAGGCAAACGAACA
TGCGGCTCACTTGAGGGATGAACAACCCGAGAGATTCGGATTCTTCGCGG
CATTGCCATGCCTGCTAGACACTGAGGGCGCATTGGAAGAAATTCGGTAT
AGCCTAGACATACTCAAAGCCGAGGGCGTCACTCTTTTCACTAGATACGG
CACCGGGAATCATTACCTGGGTCACCCAGACTTTCGCCCCATCTGGGAGG
ATCTCAACCGTCGCAAAGCCGTTGTGTTCATTCACCCGACTCATCCGGTT
GATACCAACCGCGTCAACCCCCAACTACCTCAACCGGCTATTGATTACCC
TCATGAAACCACCCGCACTGCTGTGGACCTTCTCACTACGGGAACAAAAG
CGGCCTTTCCGGACTGCAAGATTATCCTTTCTCACGCCGGTGGCACCCTT
CCCTACCTGATCTCCCGCCTAACCACCGTCACCAAAGACCCTGAAATGGA
GTACAAACCCTATGAGCGTGGCCCAAACGAGATGGTCGAAGACTTCAAAT
CATTTTACTTTGACCTCGCTCTTTCCAGCTCCCCGGCAGTGCTGACTCTT
CTGCTGAGCCTCGTGCCTCATGATCACATTGTATACGGTTCCGACTTTCC
TTACGCTAACAACAATAAAATTGCTGGGTTCAAGGAGGCTTTGGACGAAT
ACCCACTGGATCAAGAATTGAGGGACCGTATCTACTATGCAAATGCCCAG
AAACTTCTTTCTCGTTATTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010843KJC3_010843Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010843-T1KJC3_010843-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010843-T1.utr5p1KJC3_010843-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_010843-T1.utr5p2KJC3_010843-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_010843-T1.utr5p3KJC3_010843-T1.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010843-T1.exon1KJC3_010843-T1.exon1Aspergillus niger KJC3exon
KJC3_010843-T1.exon2KJC3_010843-T1.exon2Aspergillus niger KJC3exon
KJC3_010843-T1.exon3KJC3_010843-T1.exon3Aspergillus niger KJC3exon
KJC3_010843-T1.exon4KJC3_010843-T1.exon4Aspergillus niger KJC3exon
KJC3_010843-T1.exon5KJC3_010843-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010843-T1.cdsKJC3_010843-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010843-T1.utr3p1KJC3_010843-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR032466
DBxrefInterPro:IPR006680
DBxrefPFAM:PF04909
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:4501355..4503169 +
Powered by Drupal